Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sox11a

Gene Name Gene ID Reads Annotation
sox11a ENSDARG00000077811 25 SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]










Genes with expression patterns similar to sox11a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sox11a ENSDARG00000077811 25 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]
2. BEND2 BEND2 92 2.256 0.704 0.761 0.791 - - - - - -
3. uts1 ENSDARG00000014927 35 2 1.000 - - - - 1.000 - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
4. si:ch211-219a15.3 ENSDARG00000087659 12 2 1.000 - - - - 1.000 - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
5. cnn1a ENSDARG00000017193 6 1.947 1.000 0.947 - - - - - - - calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
6. si:dkeyp-87d8.9 si:dkeyp-87d8.9 21 1.936 1.000 - - - 0.936 - - - -
7. cldn10l2 ENSDARG00000105042 11 1.936 - 0.936 - - - 1.000 - - - claudin 10-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9598]
8. trpc2 trpc2 10 1.897 1.000 - - 0.897 - - - - -
9. BEND2_1 BEND2_1 45 1.893 1.000 0.893 - - - - - - -
10. pdk3a ENSDARG00000014527 15 1.872 - - 0.872 - - 1.000 - - - pyruvate dehydrogenase kinase, isozyme 3a [Source:ZFIN;Acc:ZDB-GENE-061220-3]
11. KLHL29_1 KLHL29_1 158 1.87 - 1.000 - - 0.870 - - - -
12. fastkd1 ENSDARG00000056128 141 1.87 1.000 0.870 - - - - - - - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
13. gas5 279 1.853 1.000 - - - - 0.853 - - - growth arrest-specific 5, transcript variant X4
14. chmp6b ENSDARG00000102024 37 1.846 - - - - 0.915 0.931 - - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
15. si:dkey-233e3.1 si:dkey-233e3.1 7 1.842 - - - 0.902 - 0.940 - - -
16. nr5a1a ENSDARG00000103176 12 1.834 1.000 - - - - 0.834 - - - nuclear receptor subfamily 5, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-010504-1]
17. evx2 ENSDARG00000059255 317 1.816 - 1.000 - 0.816 - - - - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
18. gcshb ENSDARG00000105187 182 1.811 1.000 - - - 0.811 - - - - glycine cleavage system protein H (aminomethyl carrier), b [Source:ZFIN;Acc:ZDB-GENE-040718-319]
19. RIMBP2_1 RIMBP2_1 57 1.794 1.000 - - 0.794 - - - - -
20. BX927369.1 ENSDARG00000105047 21 1.793 1.000 0.793 - - - - - - -
21. RDM1 RDM1 28 1.761 - 0.947 - - - 0.814 - - -
22. DUSP23 DUSP23 121 1.759 1.000 - - - - 0.759 - - -
23. si:ch211-208f21.2 ENSDARG00000094177 61 1.754 1.000 - - - - 0.754 - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
24. si:busm1-266f07.2 ENSDARG00000031745 19 1.741 - 0.888 - - - 0.853 - - - si:busm1-266f07.2 [Source:ZFIN;Acc:ZDB-GENE-030616-436]
25. si:dkey-29d8.3 ENSDARG00000091879 21 1.732 0.732 1.000 - - - - - - - si:dkey-29d8.3 [Source:ZFIN;Acc:ZDB-GENE-070912-508]
26. CR854827.2 ENSDARG00000097227 15 1.731 - - 0.864 - - 0.867 - - -
27. cyb5d1 ENSDARG00000056007 67 1.725 - - - - 0.820 0.905 - - - cytochrome b5 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-173]
28. shq1 ENSDARG00000058522 123 1.725 0.956 - - - 0.769 - - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:ZFIN;Acc:ZDB-GENE-070112-1412]
29. si:dkey-256i11.2 ENSDARG00000093713 102 1.723 - - - - 0.900 0.823 - - - si:dkey-256i11.2 [Source:ZFIN;Acc:ZDB-GENE-110913-47]
30. lpcat2 ENSDARG00000053010 137 1.72 - 0.778 - - - 0.942 - - - lysophosphatidylcholine acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-229]
31. CR388013.3 CR388013.3 45 1.706 1.000 - - - - 0.706 - - -
32. cog1 ENSDARG00000105131 35 1.698 - 0.793 - - - 0.905 - - - component of oligomeric golgi complex 1 [Source:ZFIN;Acc:ZDB-GENE-050302-128]
33. CABZ01069519.1 CABZ01069519.1 64 1.653 0.749 0.904 - - - - - - -
34. poc5 ENSDARG00000059982 569 1.652 0.758 - - - - 0.894 - - - POC5 centriolar protein homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-060526-135]
35. si:dkey-208k4.1 si:dkey-208k4.1 15 1.651 - - 0.835 - 0.816 - - - -
36. si:ch211-57i17.2 ENSDARG00000093354 58 1.648 - - - - 0.922 0.726 - - - si:ch211-57i17.2 [Source:ZFIN;Acc:ZDB-GENE-041014-258]
37. abhd12 ENSDARG00000071004 47 1.646 - 0.888 - - - 0.758 - - - abhydrolase domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-060929-268]
38. slc51a ENSDARG00000045306 33 1.645 - 0.936 - - - - - - 0.709 solute carrier family 51, alpha subunit [Source:ZFIN;Acc:ZDB-GENE-040912-10]
39. antxr1a ENSDARG00000025672 32 1.639 0.732 - - - 0.907 - - - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
40. cnr1 ENSDARG00000009020 33 1.629 - 0.882 - - 0.747 - - - - cannabinoid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040312-3]
41. 5S_rRNA_20 5S_rRNA_20 79 1.626 - - - - 0.903 0.723 - - -
42. C23H1orf192 C23H1orf192 60 1.624 - 0.757 - - - 0.867 - - -
43. si:ch211-155o21.4 ENSDARG00000096567 25 1.6 - 0.747 - - - 0.853 - - - si:ch211-155o21.4 [Source:ZFIN;Acc:ZDB-GENE-121214-169]
44. RETSAT ENSDARG00000070140 36 1.597 - 0.733 - - - 0.864 - - - retinol saturase [Source:HGNC Symbol;Acc:HGNC:25991]
45. BX511257.1 BX511257.1 66 1.59 0.723 - - - - 0.867 - - -
46. CU302436.1_1 ENSDARG00000114500 18 1.588 - 0.765 - - - 0.823 - - - si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883]
47. fabp11a ENSDARG00000017299 167 1.528 - 0.746 - 0.782 - - - - - fatty acid binding protein 11a [Source:ZFIN;Acc:ZDB-GENE-040912-132]
48. shox ENSDARG00000025891 338 1.51 - - - 0.748 - 0.762 - - - short stature homeobox [Source:ZFIN;Acc:ZDB-GENE-051030-21]
49. agpat9l ENSDARG00000006491, ENSDARG00000109952, ENSDARG00000112415 191 1.449 - - 0.748 - - 0.701 - - - 1-acylglycerol-3-phosphate O-acyltransferase 9, like [Source:ZFIN;Acc:ZDB-GENE-060531-19]
50. rragd ENSDARG00000006279 75 1.444 - 0.741 - - - 0.703 - - - ras-related GTP binding D [Source:ZFIN;Acc:ZDB-GENE-070620-6]
51. rhpn1 ENSDARG00000052454 3 1 1.000 - - - - - - - - rhophilin, Rho GTPase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081031-79]
52. gig2e ENSDARG00000075757, ENSDARG00000110217 2 1 1.000 - - - - - - - - grass carp reovirus (GCRV)-induced gene 2e [Source:ZFIN;Acc:ZDB-GENE-130517-2]
53. atrnl1a ENSDARG00000077188 66 1 1.000 - - - - - - - - attractin-like 1a [Source:ZFIN;Acc:ZDB-GENE-081028-60]
54. SEC14L1 ENSDARG00000101792 4 1 - 1.000 - - - - - - - SEC14 like lipid binding 1 [Source:HGNC Symbol;Acc:HGNC:10698]
55. CU457819.2 ENSDARG00000105374 8 1 1.000 - - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
56. DNAI2 DNAI2 6 1 1.000 - - - - - - - -
57. si:dkey-262g12.2 si:dkey-262g12.2 9 1 1.000 - - - - - - - -
58. GMEB2 ENSDARG00000093240 6 1 - - - - - 1.000 - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
59. Mar-03 Mar-03 44 1 - 1.000 - - - - - - -
60. syt15 ENSDARG00000079926 8 1 - - - - - 1.000 - - - synaptotagmin XV [Source:ZFIN;Acc:ZDB-GENE-090527-2]
61. si:dkey-253d23.9 ENSDARG00000074820 24 1 1.000 - - - - - - - - si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
62. si:ch211-187f22.2 si:ch211-187f22.2 7 1 1.000 - - - - - - - -
63. zgc:195633_1 142 1 1.000 - - - - - - - - zgc:195633
64. vsx2 ENSDARG00000005574 102 1 1.000 - - - - - - - - visual system homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001222-1]
65. QDPR QDPR 11 1 1.000 - - - - - - - -
66. irak1 ENSDARG00000025949 19 1 - - - - - 1.000 - - - interleukin-1 receptor-associated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071116-5]
67. nkx3.3 ENSDARG00000069327, ENSDARG00000110589 66 1 - - - - - 1.000 - - - NK3 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-050306-27]
68. thbs4a ENSDARG00000102777 625 1 - - - - - 1.000 - - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
69. slc25a37 ENSDARG00000073743 31 1 1.000 - - - - - - - - solute carrier family 25 (mitochondrial iron transporter), member 37 [Source:ZFIN;Acc:ZDB-GENE-031118-202]
70. itga2.1 ENSDARG00000069390 6 1 - - - - - 1.000 - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-111011-4]
71. ZC2HC1C ENSDARG00000070526 14 1 - - - - - 1.000 - - - zinc finger, C2HC-type containing 1C [Source:ZFIN;Acc:ZDB-GENE-111020-1]
72. TSPAN1 ENSDARG00000052027 4 1 - - - - - 1.000 - - - tetraspanin 1 [Source:ZFIN;Acc:ZDB-GENE-070502-5]
73. cacng8a ENSDARG00000020450 32 1 1.000 - - - - - - - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]
74. CABZ01030033.1 ENSDARG00000117613 3 1 - 1.000 - - - - - - -
75. psmb9a ENSDARG00000000656 16 1 1.000 - - - - - - - - proteasome subunit beta 9a [Source:ZFIN;Acc:ZDB-GENE-990415-140]
76. grm2a ENSDARG00000004150 64 1 1.000 - - - - - - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
77. zgc:165481 ENSDARG00000060092 95 1 - 1.000 - - - - - - - zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
78. mcm6l ENSDARG00000033231, ENSDARG00000111624 23 1 1.000 - - - - - - - - MCM6 minichromosome maintenance deficient 6, like [Source:ZFIN;Acc:ZDB-GENE-050913-141]
79. PGBD4_1 PGBD4_1 1 1 - 1.000 - - - - - - -
80. cxxc4 ENSDARG00000077817 197 1 1.000 - - - - - - - - CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
81. tmem179b ENSDARG00000069495 17 1 1.000 - - - - - - - - transmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]
82. SPTBN4 ENSDARG00000092624 6 1 - 1.000 - - - - - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
83. si:dkey-204f11.49p si:dkey-204f11.49p 97 1 1.000 - - - - - - - -
84. WIPI1 ENSDARG00000040657 138 1 1.000 - - - - - - - - WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
85. apof ENSDARG00000090980 145 1 1.000 - - - - - - - - apolipoprotein F [Source:ZFIN;Acc:ZDB-GENE-031204-36]
86. cnfn ENSDARG00000041115 21 1 1.000 - - - - - - - - cornifelin [Source:ZFIN;Acc:ZDB-GENE-040912-110]
87. syt8 syt8 82 1 1.000 - - - - - - - -
88. foxi1 ENSDARG00000104566 176 1 - - - - - 1.000 - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
89. si:dkey-282h22.5 ENSDARG00000092458 7 1 1.000 - - - - - - - - si:dkey-282h22.5 [Source:ZFIN;Acc:ZDB-GENE-091204-220]
90. inpp5jb ENSDARG00000093359 4 1 - 1.000 - - - - - - - inositol polyphosphate-5-phosphatase Jb [Source:ZFIN;Acc:ZDB-GENE-081104-46]
91. CABZ01090303.1 CABZ01090303.1 2 1 1.000 - - - - - - - -
92. hamp2 hamp2 67 1 - 1.000 - - - - - - -
93. BRINP3 BRINP3 11 1 1.000 - - - - - - - -
94. CT027705.3 CT027705.3 9 1 1.000 - - - - - - - -
95. si:dkey-47k20.6 si:dkey-47k20.6 2 1 1.000 - - - - - - - -
96. ftr58 ENSDARG00000071238 10 1 - - - - - 1.000 - - - finTRIM family, member 58 [Source:ZFIN;Acc:ZDB-GENE-080219-44]
97. si:ch73-287n15.1 si:ch73-287n15.1 20 1 1.000 - - - - - - - -
98. tbl2 ENSDARG00000043357 125 1 - - - - - 1.000 - - - transducin (beta)-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9012]
99. CU424462.2 CU424462.2 73 1 1.000 - - - - - - - -
100. zgc:92161 ENSDARG00000101749 27 1 - 1.000 - - - - - - - zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]

There are 1119 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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