Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sort1a

Gene Name Gene ID Reads Annotation
sort1a ENSDARG00000029402, ENSDARG00000117178 1480 sortilin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2329]










Genes with expression patterns similar to sort1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sort1a ENSDARG00000029402, ENSDARG00000117178 1480 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sortilin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2329]
2. APBA3 APBA3 852 2.626 - - 0.977 0.824 - - - - 0.825
3. mycb ENSDARG00000007241 3988 2.365 0.788 - - - - 0.725 - - 0.852 MYC proto-oncogene, bHLH transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-780]
4. eif4h ENSDARG00000042252 6742 2.245 - - 0.808 - - 0.718 0.719 - - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
5. ntmt1 ENSDARG00000022399 5779 2.233 - 0.750 0.722 - - - 0.761 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
6. CR388002.1 CR388002.1 1998 2.222 0.775 0.724 - - - - 0.723 - -
7. wu:fb17g07 wu:fb17g07 10567 2.221 0.782 0.708 - - - - 0.731 - -
8. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 2.21 0.710 - - - - 0.727 0.773 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
9. pbxip1a ENSDARG00000071015 4960 2.194 0.704 0.774 - - - - 0.716 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
10. mef2d ENSDARG00000040237 6144 2.188 0.730 0.736 - - - - 0.722 - - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
11. mafa ENSDARG00000015890 2140 2.175 0.714 - - - - 0.735 0.726 - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]
12. chrna1 ENSDARG00000009021 2931 2.164 - 0.731 - - - 0.703 0.730 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
13. txlnbb ENSDARG00000076241 6396 2.131 0.722 0.701 - - - - 0.708 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
14. ddx27 ENSDARG00000091831 1471 1.875 - - 0.972 - - - - - 0.903 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
15. rybpb ENSDARG00000053459 1464 1.853 - - 0.977 - - - - - 0.876 RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
16. xpnpep1 ENSDARG00000029011 1723 1.838 - - 0.962 - - - - - 0.876 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-999]
17. st5 ENSDARG00000037363, ENSDARG00000112276 1797 1.822 - - 0.985 - - - - - 0.837 suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
18. snai1b ENSDARG00000046019 886 1.809 - - 0.976 - - - - 0.833 - snail family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-980526-514]
19. flad1 ENSDARG00000070390 604 1.778 - - 0.986 - - - - 0.792 - flavin adenine dinucleotide synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-44]
20. wdr46_1 ENSDARG00000095879 1291 1.768 - - 0.964 - - - 0.804 - - WD repeat domain 46 [Source:ZFIN;Acc:ZDB-GENE-040426-1264]
21. ubl3b ENSDARG00000021556 1210 1.748 - - 0.986 - - - 0.762 - - ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
22. eng1b eng1b 2544 1.736 - 0.782 0.954 - - - - - -
23. si:ch211-283l16.1 ENSDARG00000112586 131 1.736 - 0.749 0.987 - - - - - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
24. aifm1 ENSDARG00000058088, ENSDARG00000117164 2038 1.73 - - 0.973 - - - 0.757 - - apoptosis-inducing factor, mitochondrion-associated 1 [Source:ZFIN;Acc:ZDB-GENE-030826-11]
25. myo1eb ENSDARG00000009133, ENSDARG00000109491 2396 1.723 - - 0.963 - - - - - 0.760 myosin IE, b [Source:ZFIN;Acc:ZDB-GENE-040426-1347]
26. baxa ENSDARG00000020623, ENSDARG00000089129 2611 1.716 - - 0.892 - - - - - 0.824 BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
27. dhx34 ENSDARG00000061168 349 1.711 - 0.724 0.987 - - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Source:ZFIN;Acc:ZDB-GENE-061207-30]
28. spry4 ENSDARG00000068732 2091 1.71 - - 0.897 - - - - - 0.813 sprouty homolog 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010803-2]
29. ints9 ENSDARG00000067913 600 1.707 - - 0.982 - - - 0.725 - - integrator complex subunit 9 [Source:ZFIN;Acc:ZDB-GENE-061013-129]
30. mrpl10 ENSDARG00000045091, ENSDARG00000112205 1187 1.699 - - - - - - 0.806 - 0.893 mitochondrial ribosomal protein L10 [Source:ZFIN;Acc:ZDB-GENE-050320-19]
31. chst13 chst13 669 1.695 - - 0.961 - - - - 0.734 -
32. coq9 ENSDARG00000023583, ENSDARG00000110255, ENSDARG00000111424 6051 1.691 - - 0.892 - - - 0.799 - - coenzyme Q9 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061207-37]
33. smarcd2 ENSDARG00000088877 416 1.69 - - - - - - - 0.806 0.884 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]
34. tfap4 ENSDARG00000103923 2203 1.689 - - 0.963 - - - - - 0.726 transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
35. aqp1a.1 ENSDARG00000023713 3237 1.681 - 0.904 - - - - 0.777 - - aquaporin 1a (Colton blood group), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7764]
36. prkcsh ENSDARG00000004470 1424 1.681 - - - - - - 0.780 - 0.901 protein kinase C substrate 80K-H [Source:ZFIN;Acc:ZDB-GENE-040426-770]
37. ptgs1 ENSDARG00000052148 2443 1.676 - - - - - - - 0.834 0.842 prostaglandin-endoperoxide synthase 1 [Source:ZFIN;Acc:ZDB-GENE-020530-1]
38. eaf2 ENSDARG00000010432 3768 1.676 - - 0.972 - - - 0.704 - - ELL associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-040625-179]
39. dnajc5ab ENSDARG00000004836 2923 1.674 - 0.700 0.974 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
40. ftsjd2 ftsjd2 2694 1.673 - - 0.970 - - - 0.703 - -
41. EEF1E1 ENSDARG00000071774 3806 1.67 - 0.702 0.968 - - - - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
42. gars ENSDARG00000059070 17015 1.667 - - 0.861 - - - 0.806 - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
43. hadhab ENSDARG00000060594 3664 1.665 - - 0.946 - - - 0.719 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-041111-204]
44. mrps25 ENSDARG00000041306 3654 1.663 - - - - - - 0.792 - 0.871 mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
45. gnb2 ENSDARG00000035357, ENSDARG00000105310 1523 1.661 - - - - - - - 0.776 0.885 guanine nucleotide binding protein (G protein), beta polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050320-65]
46. myo18ab ENSDARG00000061862 124 1.659 - 0.796 - - - - - - 0.863 myosin XVIIIAb [Source:ZFIN;Acc:ZDB-GENE-080423-1]
47. zgc:112175 ENSDARG00000037810 402 1.657 - - - - - - 0.778 - 0.879 zgc:112175 [Source:ZFIN;Acc:ZDB-GENE-050417-220]
48. colgalt1 ENSDARG00000073974 1473 1.655 - 0.822 - - - - - - 0.833 collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]
49. pa2g4a ENSDARG00000039578, ENSDARG00000115881 16166 1.654 - - 0.856 - - - 0.798 - - proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
50. rpl7l1 ENSDARG00000042864 3256 1.652 - - 0.946 - - 0.706 - - - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
51. hexim1 ENSDARG00000036482 4317 1.648 0.717 - 0.931 - - - - - - hexamethylene bis-acetamide inducible 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4637]
52. tars ENSDARG00000013250, ENSDARG00000110996, ENSDARG00000113759 4599 1.647 - - 0.849 - - - - - 0.798 threonyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-041010-218]
53. arvcfb ENSDARG00000061688 2388 1.645 - - - - - - 0.813 - 0.832 ARVCF, delta catenin family member b [Source:ZFIN;Acc:ZDB-GENE-060526-60]
54. zc3h14 ENSDARG00000041402, ENSDARG00000109544 2477 1.639 - - - - - 0.813 - 0.826 - zinc finger CCCH-type containing 14 [Source:ZFIN;Acc:ZDB-GENE-041014-257]
55. zgc:113363 ENSDARG00000101206 474 1.637 - 0.750 - - - - - - 0.887 zgc:113363 [Source:ZFIN;Acc:ZDB-GENE-050327-7]
56. eprs ENSDARG00000060494 4729 1.635 - - 0.910 - - - 0.725 - - glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
57. nfu1 ENSDARG00000068125 1743 1.613 - - - - - 0.722 - - 0.891 NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-365]
58. fat1 fat1 3934 1.612 0.714 - 0.898 - - - - - -
59. prdx1 ENSDARG00000058734 4582 1.61 - 0.752 0.858 - - - - - - peroxiredoxin 1 [Source:ZFIN;Acc:ZDB-GENE-050320-35]
60. si:ch211-226m16.2 ENSDARG00000036785 2163 1.61 - - 0.844 - - - - - 0.766 si:ch211-226m16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2302]
61. si:ch211-214j24.10 ENSDARG00000045847 5145 1.607 - - - - - 0.763 - - 0.844 si:ch211-214j24.10 [Source:ZFIN;Acc:ZDB-GENE-030131-6301]
62. MYOT ENSDARG00000076312 1791 1.606 - 0.828 - - - - 0.778 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
63. nid1a ENSDARG00000068710 3948 1.601 0.866 - - - - - 0.735 - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
64. rpp14 ENSDARG00000011152 524 1.596 - 0.713 - - - - 0.883 - - ribonuclease P/MRP 14 subunit [Source:ZFIN;Acc:ZDB-GENE-050522-182]
65. rnf20 ENSDARG00000016664 3641 1.589 - - - 0.727 - - - - 0.862 ring finger protein 20, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-130404-2]
66. TMPO TMPO 3264 1.585 - 0.799 - - - - 0.786 - -
67. noc3l ENSDARG00000002487 230 1.585 - 0.854 - - - - 0.731 - - NOC3-like DNA replication regulator [Source:ZFIN;Acc:ZDB-GENE-030131-9878]
68. usp4 ENSDARG00000014770 1684 1.582 - - - - - - 0.811 0.771 - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
69. dap3 ENSDARG00000078500 2724 1.582 0.788 - - - - 0.794 - - - death associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-051129-2]
70. sipa1l1 ENSDARG00000020134 565 1.582 - 0.706 - - - - - - 0.876 signal-induced proliferation-associated 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9909]
71. pa2g4b ENSDARG00000070657 7999 1.58 - 0.765 - - - - - 0.815 - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
72. immt ENSDARG00000102874 3435 1.573 - - - - - 0.740 - - 0.833 inner membrane protein, mitochondrial (mitofilin) [Source:ZFIN;Acc:ZDB-GENE-030131-5417]
73. plch1 ENSDARG00000079253 1216 1.572 0.705 - - - - - - - 0.867 phospholipase C, eta 1 [Source:ZFIN;Acc:ZDB-GENE-060503-398]
74. trap1 ENSDARG00000024317, ENSDARG00000114173 2189 1.569 - 0.753 - - - - 0.816 - - TNF receptor-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4257]
75. lysmd1 ENSDARG00000054789 277 1.566 - - - - - - 0.758 0.808 - LysM, putative peptidoglycan-binding, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1094]
76. PAQR4 PAQR4 2150 1.565 - 0.757 - - - - - - 0.808
77. lmo2 ENSDARG00000095019 1098 1.56 - - - - - - 0.752 0.808 - LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
78. camk2a ENSDARG00000053617 950 1.557 - 0.744 - - - - 0.813 - - calcium/calmodulin-dependent protein kinase II alpha [Source:ZFIN;Acc:ZDB-GENE-051113-72]
79. si:ch211-197l9.2 ENSDARG00000078244 655 1.553 - 0.704 - - - - 0.849 - - si:ch211-197l9.2 [Source:ZFIN;Acc:ZDB-GENE-091204-369]
80. timm10 ENSDARG00000069116 4459 1.545 - - - - - - 0.772 0.773 - translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
81. smarcd3a ENSDARG00000038786 2894 1.543 - 0.774 - - - - 0.769 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3a [Source:ZFIN;Acc:ZDB-GENE-070912-491]
82. LSM5 ENSDARG00000071573 371 1.542 0.806 - - - - - 0.736 - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
83. smtnl1 ENSDARG00000041257 7410 1.539 - - - - - - 0.730 0.809 - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
84. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.536 - 0.763 - - - - 0.773 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
85. sox10 ENSDARG00000077467 1936 1.535 0.730 - - - - - 0.805 - - SRY (sex determining region Y)-box 10 [Source:ZFIN;Acc:ZDB-GENE-011207-1]
86. dnajc18 ENSDARG00000056005 8084 1.534 - - - - - - 0.765 0.769 - DnaJ (Hsp40) homolog, subfamily C, member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-8019]
87. CABZ01086825.1 CABZ01086825.1 573 1.531 - 0.785 - - - - 0.746 - -
88. cpox ENSDARG00000062025 286 1.53 - 0.751 - - - - 0.779 - - coproporphyrinogen oxidase [Source:ZFIN;Acc:ZDB-GENE-030131-9884]
89. pus7 ENSDARG00000031774 195 1.528 - - - - - - 0.751 0.777 - pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
90. cdh5 ENSDARG00000075549 2288 1.526 - - - - - 0.724 - 0.802 - cadherin 5 [Source:ZFIN;Acc:ZDB-GENE-040816-1]
91. snx27a ENSDARG00000033804 2249 1.525 - - - - - - 0.734 - 0.791 sorting nexin family member 27a [Source:ZFIN;Acc:ZDB-GENE-060503-371]
92. mdh2 ENSDARG00000043371 14485 1.524 0.713 - - - - - 0.811 - - malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
93. ryr3 ENSDARG00000071331 6795 1.523 - 0.792 - - - - 0.731 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
94. ktn1 ENSDARG00000032802 6251 1.522 - - - - - - 0.725 0.797 - kinectin 1 [Source:ZFIN;Acc:ZDB-GENE-030408-4]
95. uckl1b ENSDARG00000078973 2237 1.522 - 0.761 - - - - 0.761 - - uridine-cytidine kinase 1-like 1b [Source:ZFIN;Acc:ZDB-GENE-090311-45]
96. CBFA2T3 ENSDARG00000079012 6799 1.518 - 0.806 - - - - 0.712 - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
97. xrcc5_1 ENSDARG00000099298 1533 1.518 0.710 - - - - - - - 0.808 X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
98. flncb ENSDARG00000018820 5595 1.517 0.731 - - - - - 0.786 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
99. tmsb ENSDARG00000054911 6411 1.517 0.810 - - - - - 0.707 - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
100. myod1 ENSDARG00000030110 6019 1.517 - - - - - 0.740 0.777 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]

There are 1763 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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