Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for snip1

Gene Name Gene ID Reads Annotation
snip1 ENSDARG00000087528 275 Smad nuclear interacting protein [Source:ZFIN;Acc:ZDB-GENE-041026-3]










Genes with expression patterns similar to snip1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snip1 ENSDARG00000087528 275 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Smad nuclear interacting protein [Source:ZFIN;Acc:ZDB-GENE-041026-3]
2. nmnat1 ENSDARG00000105748 102 2.201 - - - 0.778 - - 0.708 - 0.715 nicotinamide nucleotide adenylyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-101]
3. dhodh ENSDARG00000051889 401 1.664 - 0.837 - 0.827 - - - - - dihydroorotate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-3157]
4. si:dkey-242k1.6 ENSDARG00000101205 112 1.651 - 0.779 - 0.872 - - - - - si:dkey-242k1.6 [Source:ZFIN;Acc:ZDB-GENE-041008-84]
5. abcb6b ENSDARG00000074254 600 1.645 - - - 0.771 - - 0.874 - - ATP-binding cassette, sub-family B (MDR/TAP), member 6b [Source:ZFIN;Acc:ZDB-GENE-070912-584]
6. fbxo32 ENSDARG00000040277 93 1.633 - 0.792 - 0.841 - - - - - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
7. C17H10orf137 C17H10orf137 273 1.603 - 0.790 - - - - 0.813 - -
8. lbx1b ENSDARG00000018611 399 1.595 0.760 - - 0.835 - - - - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
9. coro2ba ENSDARG00000079440 420 1.594 0.786 - - 0.808 - - - - - coronin, actin binding protein, 2Ba [Source:ZFIN;Acc:ZDB-GENE-050518-1]
10. PEX5L PEX5L 179 1.589 0.723 - - 0.866 - - - - -
11. flj11011l ENSDARG00000045360, ENSDARG00000114911 332 1.578 - 0.712 - 0.866 - - - - - hypothetical protein FLJ11011-like (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-050113-1]
12. megf11 ENSDARG00000062686 230 1.571 - 0.735 - 0.836 - - - - - multiple EGF-like-domains 11 [Source:ZFIN;Acc:ZDB-GENE-060503-252]
13. si:dkey-150k17.2 si:dkey-150k17.2 40 1.566 - 0.749 - - - 0.817 - - -
14. ccrl1b ccrl1b 154 1.562 - - - - - 0.794 0.768 - -
15. zfpm1 ENSDARG00000041572, ENSDARG00000109585 331 1.562 - 0.809 - - - - 0.753 - - zinc finger protein, FOG family member 1 [Source:ZFIN;Acc:ZDB-GENE-050419-238]
16. clock3 clock3 136 1.555 - 0.724 - 0.831 - - - - -
17. lactb ENSDARG00000040803 435 1.55 - 0.842 - - - - 0.708 - - lactamase, beta [Source:ZFIN;Acc:ZDB-GENE-020111-1]
18. si:dkey-103i16.2 si:dkey-103i16.2 492 1.545 0.804 - - 0.741 - - - - -
19. HYAL2_1 HYAL2_1 266 1.543 - 0.784 - - - - 0.759 - -
20. BX537137.1 ENSDARG00000092436 77 1.541 - 0.748 - 0.793 - - - - - gastrula zinc finger protein XlCGF7.1 [Source:NCBI gene;Acc:100148466]
21. CR478286.1_1 CR478286.1_1 306 1.538 - 0.710 - - - - 0.828 - -
22. BX000701.2 ENSDARG00000105074 1123 1.537 - 0.730 - 0.807 - - - - - gastrula zinc finger protein XlCGF7.1-like [Source:NCBI gene;Acc:101884528]
23. si:ch211-225b11.1 ENSDARG00000002405 172 1.532 - 0.813 - 0.719 - - - - - si:ch211-225b11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-39]
24. rangap1b ENSDARG00000056059, ENSDARG00000115814 1109 1.525 - 0.745 - - - - - - 0.780 Ran GTPase activating protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1921]
25. arsh ENSDARG00000002299 331 1.499 - 0.746 - - - - 0.753 - - arylsulfatase H [Source:ZFIN;Acc:ZDB-GENE-081104-120]
26. rictorb ENSDARG00000002020 365 1.496 0.793 - - - - - 0.703 - - RPTOR independent companion of MTOR, complex 2b [Source:ZFIN;Acc:ZDB-GENE-070810-5]
27. josd2 ENSDARG00000057626, ENSDARG00000111978 273 1.495 - 0.700 - - - 0.795 - - - Josephin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-850]
28. si:dkey-229d11.5 ENSDARG00000094392 33 1.494 - 0.748 - - - - - - 0.746 si:dkey-229d11.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5342]
29. TBC1D14 ENSDARG00000003520 281 1.481 - - - 0.777 - 0.704 - - - TBC1 domain family, member 14 [Source:ZFIN;Acc:ZDB-GENE-030131-6136]
30. nptnb ENSDARG00000043864 165 1.479 - 0.733 - - - - - - 0.746 neuroplastin b [Source:ZFIN;Acc:ZDB-GENE-040426-1821]
31. ptgdsb.2 ENSDARG00000071626 105 1.474 - 0.749 - - 0.725 - - - - prostaglandin D2 synthase b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030911-3]
32. FP236513.2 FP236513.2 443 1.473 - - - - - 0.738 0.735 - -
33. atp2c1 ENSDARG00000060197 273 1.469 - - - - - 0.713 0.756 - - ATPase secretory pathway Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-060503-615]
34. hinfp ENSDARG00000004851 273 1.465 0.751 - - - - - - 0.714 - histone H4 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040426-2764]
35. si:ch211-117c9.5 ENSDARG00000071235 154 1.465 - 0.750 - 0.715 - - - - - si:ch211-117c9.5 [Source:ZFIN;Acc:ZDB-GENE-110408-2]
36. eaf1 ENSDARG00000070795, ENSDARG00000113962 834 1.453 - - - 0.724 - 0.729 - - - ELL associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-109]
37. sgsm3 ENSDARG00000019038 352 1.45 - 0.749 - - - - 0.701 - - small G protein signaling modulator 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2635]
38. CTTNBP2NL CTTNBP2NL 260 1.449 - - - 0.713 - 0.736 - - -
39. CABZ01079241.1 ENSDARG00000098424 88 1.444 - 0.727 - - - - 0.717 - - zinc finger Y-chromosomal protein 1-like [Source:NCBI gene;Acc:563292]
40. si:ch211-218c6.9 si:ch211-218c6.9 40 1.438 - - - - - - 0.723 - 0.715
41. SLC22A23_1 SLC22A23_1 308 1.431 - - - 0.718 - - - 0.713 -
42. tmem35 ENSDARG00000052567 5685 1.423 0.707 0.716 - - - - - - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
43. st8sia5 ENSDARG00000036584 529 0.941 0.941 - - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
44. krit1 ENSDARG00000098916 431 0.934 0.934 - - - - - - - - KRIT1, ankyrin repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-555]
45. cib1 ENSDARG00000103118 291 0.923 - - - - - - 0.923 - - calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
46. cacnb2b ENSDARG00000055565 20 0.92 - - - - - - 0.920 - - calcium channel, voltage-dependent, beta 2b [Source:ZFIN;Acc:ZDB-GENE-050208-129]
47. taf1 ENSDARG00000035330 912 0.917 - 0.917 - - - - - - - TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5576]
48. LRP3 ENSDARG00000008485 1401 0.909 - - - - - - - - 0.909 low density lipoprotein receptor-related protein 3 [Source:ZFIN;Acc:ZDB-GENE-080116-3]
49. si:ch211-148l7.4 ENSDARG00000094469 221 0.905 - - - - - - 0.905 - - si:ch211-148l7.4 [Source:ZFIN;Acc:ZDB-GENE-090313-38]
50. atp6v0a2a ENSDARG00000035538 278 0.903 0.903 - - - - - - - - ATPase H+ transporting V0 subunit a2a [Source:ZFIN;Acc:ZDB-GENE-091113-4]
51. nol8 ENSDARG00000044143 425 0.898 - - - - - - 0.898 - - nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
52. si:dkey-17e6.2 si:dkey-17e6.2 72 0.894 - - - 0.894 - - - - -
53. CR790363.1 ENSDARG00000097364 145 0.893 - - - 0.893 - - - - -
54. luzp2 ENSDARG00000068247 80 0.89 - - - 0.890 - - - - - leucine zipper protein 2 [Source:ZFIN;Acc:ZDB-GENE-060503-278]
55. spint1b ENSDARG00000012467 97 0.889 - - - - - - - - 0.889 serine peptidase inhibitor, Kunitz type 1 b [Source:ZFIN;Acc:ZDB-GENE-071218-1]
56. hnrnpa3 ENSDARG00000059351 453 0.888 - - - 0.888 - - - - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
57. LRRC61 ENSDARG00000077357 55 0.886 - - - 0.886 - - - - - leucine rich repeat containing 61 [Source:ZFIN;Acc:ZDB-GENE-060616-245]
58. tsen34 ENSDARG00000061370, ENSDARG00000115749 814 0.886 - - - - - - 0.886 - - TSEN34 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-050419-115]
59. si:ch211-153l6.4 si:ch211-153l6.4 45 0.885 - - - - - - 0.885 - -
60. fam92a1 ENSDARG00000004436 658 0.882 - - - - - - 0.882 - - family with sequence similarity 92, member A1 [Source:ZFIN;Acc:ZDB-GENE-040801-123]
61. sh2d5 ENSDARG00000014324 228 0.882 - 0.882 - - - - - - - SH2 domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-050327-67]
62. zgc:173994 zgc:173994 204 0.881 - 0.881 - - - - - - -
63. PRR5L PRR5L 408 0.881 - - - 0.881 - - - - -
64. si:dkey-20i20.2 ENSDARG00000071719 659 0.877 - - - - - - 0.877 - - si:dkey-20i20.2 [Source:ZFIN;Acc:ZDB-GENE-060503-528]
65. si:dkey-204f11.64 ENSDARG00000094695 586 0.875 - - - - - - 0.875 - - si:dkey-204f11.64 [Source:ZFIN;Acc:ZDB-GENE-030131-8332]
66. gna13a ENSDARG00000073765 925 0.875 - - - - - 0.875 - - - guanine nucleotide binding protein (G protein), alpha 13a [Source:ZFIN;Acc:ZDB-GENE-030131-5024]
67. C2H14orf119 C2H14orf119 716 0.875 - - - - - - 0.875 - -
68. inhbaa ENSDARG00000012671 207 0.875 - 0.875 - - - - - - - inhibin subunit beta Aa [Source:ZFIN;Acc:ZDB-GENE-000210-21]
69. CR790368.1 ENSDARG00000100936 20 0.875 - - - 0.875 - - - - - uncharacterized LOC110440102 [Source:NCBI gene;Acc:110440102]
70. CABZ01117079.1 CABZ01117079.1 123 0.874 - - - - - - - - 0.874
71. NACC2 160 0.874 - - - 0.874 - - - - - NACC family member 2
72. atp2b1b ENSDARG00000007788 56 0.873 - - - 0.873 - - - - - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
73. grxcr1 ENSDARG00000069865 22 0.873 - - - 0.873 - - - - - glutaredoxin, cysteine rich 1 [Source:ZFIN;Acc:ZDB-GENE-070424-166]
74. ppp1r8 ppp1r8 310 0.873 - - - 0.873 - - - - -
75. PELI3 ENSDARG00000087452, ENSDARG00000111338 166 0.873 - 0.873 - - - - - - - pellino E3 ubiquitin protein ligase family member 3 [Source:ZFIN;Acc:ZDB-GENE-110304-4]
76. lef1 ENSDARG00000031894 492 0.872 - - - 0.872 - - - - - lymphoid enhancer-binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-990714-26]
77. PARP4 ENSDARG00000069934 70 0.872 - - - - - - 0.872 - - poly (ADP-ribose) polymerase family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-387]
78. SPAG17 SPAG17 31 0.87 - 0.870 - - - - - - -
79. SNORD36_1 SNORD36_1 44 0.869 - - - - - - 0.869 - -
80. zgc:158852 ENSDARG00000102076 65 0.869 - - - - - - - - 0.869 zgc:158852 [Source:ZFIN;Acc:ZDB-GENE-070112-972]
81. trmt6 ENSDARG00000042344 224 0.869 - 0.869 - - - - - - - tRNA methyltransferase 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-051120-141]
82. cdh13 ENSDARG00000014215 106 0.869 - - - - - - 0.869 - - cadherin 13, H-cadherin (heart) [Source:ZFIN;Acc:ZDB-GENE-060503-286]
83. krt1-c5 ENSDARG00000026979 325 0.868 - - - 0.868 - - - - - keratin, type 1, gene c5 [Source:ZFIN;Acc:ZDB-GENE-060316-3]
84. camk1db ENSDARG00000017446 47 0.868 - - - 0.868 - - - - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
85. amh ENSDARG00000014357 15 0.868 - - - 0.868 - - - - - anti-Mullerian hormone [Source:ZFIN;Acc:ZDB-GENE-050706-192]
86. creg2 ENSDARG00000000666 643 0.867 - 0.867 - - - - - - - cellular repressor of E1A-stimulated genes 2 [Source:ZFIN;Acc:ZDB-GENE-041114-173]
87. SERINC3 SERINC3 21 0.867 - - - 0.867 - - - - -
88. bmp3 ENSDARG00000060526, ENSDARG00000109238 54 0.867 - - - 0.867 - - - - - bone morphogenetic protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7192]
89. cdk4 ENSDARG00000087937 80 0.866 - - - - - - 0.866 - - cyclin-dependent kinase 4 [Source:ZFIN;Acc:ZDB-GENE-060929-974]
90. VDR VDR 489 0.864 - - - 0.864 - - - - -
91. ENSDARG00000023499 ENSDARG00000023499 395 0.864 - - - 0.864 - - - - -
92. mei4 ENSDARG00000043912 10 0.864 - - - 0.864 - - - - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
93. usp44 ENSDARG00000089861 1532 0.863 - 0.863 - - - - - - - ubiquitin specific peptidase 44 [Source:ZFIN;Acc:ZDB-GENE-040426-774]
94. si:ch211-67e16.4 ENSDARG00000086317 609 0.863 - 0.863 - - - - - - - si:ch211-67e16.4 [Source:ZFIN;Acc:ZDB-GENE-070912-311]
95. F8A3 F8A3 646 0.862 0.862 - - - - - - - -
96. MAST2 ENSDARG00000074311, ENSDARG00000109372 1527 0.862 - 0.862 - - - - - - - microtubule associated serine/threonine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050309-150]
97. DTX4 ENSDARG00000076302 2642 0.862 0.862 - - - - - - - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
98. gpr22 gpr22 115 0.861 - - - 0.861 - - - - -
99. slc43a3b ENSDARG00000057949 194 0.861 - - - - - - 0.861 - - solute carrier family 43, member 3b [Source:ZFIN;Acc:ZDB-GENE-060312-28]
100. BX004816.4 BX004816.4 33 0.86 - - - 0.860 - - - - -

There are 1079 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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