Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for snapc1b

Gene Name Gene ID Reads Annotation
snapc1b ENSDARG00000003827 422 small nuclear RNA activating complex, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-716]










Genes with expression patterns similar to snapc1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snapc1b ENSDARG00000003827 422 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 small nuclear RNA activating complex, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-716]
2. sfi1 ENSDARG00000053992 1075 2.408 0.736 - - 0.946 - 0.726 - - - SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
3. wasb ENSDARG00000026350 139 2.399 0.716 - - 0.934 - - 0.749 - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b [Source:ZFIN;Acc:ZDB-GENE-030131-7098]
4. hes2.2 ENSDARG00000068168 197 1.774 0.824 - - 0.950 - - - - - hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
5. si:ch1073-127d16.1 ENSDARG00000087674 105 1.773 - - - 0.936 - - 0.837 - - si:ch1073-127d16.1 [Source:ZFIN;Acc:ZDB-GENE-120214-30]
6. tmem104 ENSDARG00000088560 859 1.767 - - - 0.943 - 0.824 - - - transmembrane protein 104 [Source:ZFIN;Acc:ZDB-GENE-070822-4]
7. TTC17 ENSDARG00000044812 124 1.753 - - - 0.932 - 0.821 - - - tetratricopeptide repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-100422-15]
8. pmelb ENSDARG00000033760 206 1.723 - - - 0.924 - - 0.799 - - premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
9. CT025934.2 CT025934.2 22 1.696 - - - - - 0.947 0.749 - -
10. st18 663 1.671 0.754 - - 0.917 - - - - - suppression of tumorigenicity 18, zinc finger
11. larp7 ENSDARG00000017315 1194 1.663 - - - 0.854 - - 0.809 - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
12. ECI2 ENSDARG00000102412 848 1.659 - - - 0.895 - 0.764 - - - enoyl-CoA delta isomerase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-392]
13. polr3a ENSDARG00000102569 1072 1.651 - - - 0.805 - 0.846 - - - polymerase (RNA) III (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-050208-103]
14. CU570791.5 CU570791.5 872 1.637 - - - 0.899 - 0.738 - - -
15. slc29a2 ENSDARG00000001767, ENSDARG00000115816 439 1.631 - - - 0.819 - 0.812 - - - solute carrier family 29 (equilibrative nucleoside transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-050220-15]
16. mettl17 ENSDARG00000103889, ENSDARG00000109400 239 1.613 - 0.752 - 0.861 - - - - - methyltransferase like 17 [Source:ZFIN;Acc:ZDB-GENE-031118-203]
17. ddx27 ENSDARG00000091831 1471 1.593 - - - 0.805 - 0.788 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
18. snupn ENSDARG00000008395 507 1.592 - - - 0.870 - 0.722 - - - snurportin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3464]
19. pih1d3 ENSDARG00000038612, ENSDARG00000116391, ENSDARG00000116607 57 1.586 0.774 - - - - - 0.812 - - PIH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040722-2]
20. CHCHD4 CHCHD4 185 1.571 - - - 0.847 - - 0.724 - -
21. exoc3l1 ENSDARG00000051899, ENSDARG00000113508, ENSDARG00000114148 195 1.568 0.774 - - - - - 0.794 - - exocyst complex component 3-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-36]
22. mtor ENSDARG00000053196 2156 1.566 - - - 0.762 - 0.804 - - - mechanistic target of rapamycin kinase [Source:ZFIN;Acc:ZDB-GENE-030131-2974]
23. snrnp25 ENSDARG00000020363 588 1.56 - - - 0.795 - 0.765 - - - small nuclear ribonucleoprotein 25 [Source:ZFIN;Acc:ZDB-GENE-050417-179]
24. si:ch211-136a13.1 ENSDARG00000060927 250 1.539 0.833 - - - - 0.706 - - - si:ch211-136a13.1 [Source:ZFIN;Acc:ZDB-GENE-050419-214]
25. gak ENSDARG00000090654 695 1.537 - - - 0.827 - - 0.710 - - cyclin G associated kinase [Source:ZFIN;Acc:ZDB-GENE-041210-358]
26. pqbp1 ENSDARG00000029724 1472 1.528 - - - 0.748 - 0.780 - - - polyglutamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030616-158]
27. wnt10a ENSDARG00000017155 491 1.527 - 0.821 - - - 0.706 - - - wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
28. si:ch211-250m6.8 si:ch211-250m6.8 51 1.523 0.774 - - - - - 0.749 - -
29. SHC3 ENSDARG00000098909 332 1.512 - - - 0.782 0.730 - - - - SHC adaptor protein 3 [Source:HGNC Symbol;Acc:HGNC:18181]
30. c1qtnf5 ENSDARG00000056134 729 1.504 - - - - - 0.755 0.749 - - C1q and TNF related 5 [Source:ZFIN;Acc:ZDB-GENE-050706-101]
31. CR352265.1 ENSDARG00000062758 39 1.475 - - - - - 0.757 0.718 - -
32. RSPH1 289 1.471 - - - - - 0.746 0.725 - - radial spoke head 1 homolog (Chlamydomonas), transcript variant X2
33. GTSF1L GTSF1L 2089 1.442 - 0.717 - - - 0.725 - - -
34. zmym4 ENSDARG00000035823 347 0.954 - - - 0.954 - - - - - zinc finger, MYM-type 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5459]
35. zgc:158343 ENSDARG00000099411, ENSDARG00000110524, ENSDARG00000110558, ENSDARG00000112808 1061 0.951 - - - 0.951 - - - - - zgc:158343 [Source:ZFIN;Acc:ZDB-GENE-061201-9]
36. anapc7 ENSDARG00000063005 1139 0.951 - - - 0.951 - - - - - anaphase promoting complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-081104-113]
37. xpc ENSDARG00000039754 515 0.949 - - - 0.949 - - - - - xeroderma pigmentosum, complementation group C [Source:ZFIN;Acc:ZDB-GENE-030131-8461]
38. znhit2 ENSDARG00000030805 197 0.949 - - - 0.949 - - - - - zinc finger, HIT-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-46]
39. GPN1 ENSDARG00000043928 566 0.947 - - - 0.947 - - - - - GPN-loop GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-154]
40. ptpn23a ENSDARG00000070124 1206 0.946 - - - 0.946 - - - - - protein tyrosine phosphatase, non-receptor type 23, a [Source:ZFIN;Acc:ZDB-GENE-100921-24]
41. C12H10orf88 C12H10orf88 449 0.945 - - - 0.945 - - - - -
42. fam49a ENSDARG00000006672 939 0.945 - - - 0.945 - - - - - family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
43. zgc:165515 ENSDARG00000116300 182 0.944 - - - 0.944 - - - - - zgc:165515 [Source:ZFIN;Acc:ZDB-GENE-030131-1772]
44. rexo1 ENSDARG00000026986 770 0.944 - - - 0.944 - - - - - REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
45. si:dkeyp-20e4.3 si:dkeyp-20e4.3 68 0.944 - - - 0.944 - - - - -
46. zdhhc6 ENSDARG00000075721 1494 0.943 - - - 0.943 - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
47. tdrd3 ENSDARG00000025421 633 0.943 - - - 0.943 - - - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
48. lhx9 ENSDARG00000056979 249 0.942 - - - 0.942 - - - - - LIM homeobox 9 [Source:ZFIN;Acc:ZDB-GENE-050417-210]
49. TP53BP2 TP53BP2 217 0.942 - - - 0.942 - - - - -
50. zgc:165525 zgc:165525 207 0.941 - - - 0.941 - - - - -
51. lmo1 ENSDARG00000034504 260 0.941 - - - 0.941 - - - - - LIM domain only 1 [Source:ZFIN;Acc:ZDB-GENE-021115-6]
52. rs1 rs1 70 0.941 - - - 0.941 - - - - -
53. AKAP13_1 ENSDARG00000079994 444 0.941 - - - 0.941 - - - - - A-kinase anchoring protein 13 [Source:HGNC Symbol;Acc:HGNC:371]
54. DHX36 ENSDARG00000101059 314 0.94 - - - 0.940 - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 36 [Source:ZFIN;Acc:ZDB-GENE-050419-20]
55. NHSL1 NHSL1 182 0.94 - - - 0.940 - - - - -
56. aanat2 ENSDARG00000079802 175 0.94 - - - 0.940 - - - - - arylalkylamine N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-991019-6]
57. zgc:173705 ENSDARG00000105137, ENSDARG00000114437 83 0.94 - - - 0.940 - - - - - zgc:173705 [Source:ZFIN;Acc:ZDB-GENE-080212-6]
58. pomcb ENSDARG00000069307 72 0.939 - - - 0.939 - - - - - proopiomelanocortin b [Source:ZFIN;Acc:ZDB-GENE-041014-294]
59. trmt2b ENSDARG00000033967 127 0.939 - - - 0.939 - - - - - tRNA methyltransferase 2 homolog B [Source:ZFIN;Acc:ZDB-GENE-050809-101]
60. supt20 ENSDARG00000078658 713 0.939 - - - 0.939 - - - - - SPT20 homolog, SAGA complex component [Source:ZFIN;Acc:ZDB-GENE-091204-264]
61. mus81 ENSDARG00000069326, ENSDARG00000111800 400 0.939 - - - 0.939 - - - - - MUS81 structure-specific endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2923]
62. PARD3B PARD3B 401 0.939 - - - 0.939 - - - - -
63. si:dkey-283b15.3 si:dkey-283b15.3 81 0.938 - - - 0.938 - - - - -
64. ftr65 202 0.938 - - - 0.938 - - - - - finTRIM family, member 65
65. JMJD1C JMJD1C 289 0.938 - - - 0.938 - - - - -
66. znf710a ENSDARG00000014680 582 0.938 - - - 0.938 - - - - - zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
67. PARP12 PARP12 77 0.938 - - - 0.938 - - - - -
68. arhgef7b ENSDARG00000073848 1249 0.937 - - - 0.937 - - - - - Rho guanine nucleotide exchange factor (GEF) 7b [Source:ZFIN;Acc:ZDB-GENE-041212-49]
69. ZCCHC2 ENSDARG00000067950 204 0.937 - - - 0.937 - - - - - zinc finger, CCHC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070912-269]
70. phf10 ENSDARG00000070084 1210 0.937 - - - 0.937 - - - - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
71. taf1b ENSDARG00000028937 879 0.937 - - - 0.937 - - - - - TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B [Source:ZFIN;Acc:ZDB-GENE-041008-2]
72. cep76 ENSDARG00000058319 143 0.936 - - - 0.936 - - - - - centrosomal protein 76 [Source:ZFIN;Acc:ZDB-GENE-070820-5]
73. tapt1b ENSDARG00000061143, ENSDARG00000109798, ENSDARG00000112241 482 0.936 - - - 0.936 - - - - - transmembrane anterior posterior transformation 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4025]
74. dpf2 ENSDARG00000012219 666 0.936 - - - 0.936 - - - - - D4, zinc and double PHD fingers family 2 [Source:ZFIN;Acc:ZDB-GENE-041024-2]
75. BX000999.4_1 BX000999.4_1 222 0.935 - - - 0.935 - - - - -
76. rims2a ENSDARG00000101606 1088 0.935 - - - 0.935 - - - - - regulating synaptic membrane exocytosis 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1656]
77. gnav1 ENSDARG00000043006 305 0.935 - - - 0.935 - - - - - guanine nucleotide binding protein (G protein) alpha v1 [Source:ZFIN;Acc:ZDB-GENE-081031-92]
78. egr2a ENSDARG00000044098 1101 0.935 - - - 0.935 - - - - - early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
79. gng2_1 ENSDARG00000056831 113 0.935 - - - 0.935 - - - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
80. DTX3 DTX3 303 0.934 - - - 0.934 - - - - -
81. eef1a1a ENSDARG00000039502 234 0.934 - - - 0.934 - - - - - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
82. tuba7l ENSDARG00000104643 33 0.934 - - - 0.934 - - - - - tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
83. ptk6b ENSDARG00000059956 44 0.934 - - - 0.934 - - - - - PTK6 protein tyrosine kinase 6b [Source:ZFIN;Acc:ZDB-GENE-060929-1150]
84. rxrba ENSDARG00000078954 85 0.934 - - - 0.934 - - - - - retinoid x receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-980526-436]
85. uvrag ENSDARG00000023815 424 0.934 - - - 0.934 - - - - - UV radiation resistance associated gene [Source:ZFIN;Acc:ZDB-GENE-040426-924]
86. crp4 714 0.934 - - - 0.934 - - - - - C-reactive protein 4
87. si:dkey-100n10.2 101 0.934 - - - 0.934 - - - - - si:dkey-100n10.2
88. nr4a2b ENSDARG00000044532 103 0.934 - - - 0.934 - - - - - nuclear receptor subfamily 4, group A, member 2b [Source:ZFIN;Acc:ZDB-GENE-040718-103]
89. ADCY3 ADCY3 537 0.934 - - - 0.934 - - - - -
90. ENSDARG00000058760 ENSDARG00000058760 1076 0.934 - - - 0.934 - - - - -
91. ulk3 ENSDARG00000101661 69 0.934 - - - 0.934 - - - - - unc-51 like kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070410-33]
92. ppfia2 ENSDARG00000013000 45 0.933 - - - 0.933 - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7905]
93. fam151b ENSDARG00000020024 255 0.933 - - - 0.933 - - - - - family with sequence similarity 151, member B [Source:ZFIN;Acc:ZDB-GENE-040801-38]
94. SYNGAP1_1 SYNGAP1_1 66 0.933 - - - 0.933 - - - - -
95. acp6 ENSDARG00000040064 197 0.933 - - - 0.933 - - - - - acid phosphatase 6, lysophosphatidic [Source:ZFIN;Acc:ZDB-GENE-050208-290]
96. SPTBN4_1 ENSDARG00000092624 473 0.932 - - - 0.932 - - - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
97. HTRA4 ENSDARG00000005943 77 0.932 - - - 0.932 - - - - - HtrA serine peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-131120-192]
98. CU639413.2 CU639413.2 33 0.932 - - - 0.932 - - - - -
99. CDKN1C CDKN1C 667 0.932 - - - 0.932 - - - - -
100. GPR180 73 0.931 - - - 0.931 - - - - - G protein-coupled receptor 180, transcript variant X2

There are 1400 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA