Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for smg1

Gene Name Gene ID Reads Annotation
smg1 ENSDARG00000054570, ENSDARG00000116568 1271 SMG1 phosphatidylinositol 3-kinase-related kinase [Source:ZFIN;Acc:ZDB-GENE-061013-767]










Genes with expression patterns similar to smg1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smg1 ENSDARG00000054570, ENSDARG00000116568 1271 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SMG1 phosphatidylinositol 3-kinase-related kinase [Source:ZFIN;Acc:ZDB-GENE-061013-767]
2. lamb4 ENSDARG00000039133 1220 1.707 - 0.824 - - - 0.883 - - - laminin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-021226-2]
3. pvrl1b 1645 1.701 - 0.845 - - - 0.856 - - - poliovirus receptor-related 1b
4. elp5 ENSDARG00000067918 541 1.672 - - - - - 0.877 - 0.795 - elongator acetyltransferase complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-061215-33]
5. kmt2e ENSDARG00000007523 1851 1.672 - 0.798 - - - 0.874 - - - lysine (K)-specific methyltransferase 2E [Source:ZFIN;Acc:ZDB-GENE-030131-4120]
6. tmem243a ENSDARG00000042214, ENSDARG00000110407 527 1.645 - 0.744 - - - 0.901 - - - transmembrane protein 243, mitochondrial a [Source:ZFIN;Acc:ZDB-GENE-050417-264]
7. pnp5a ENSDARG00000078619 1461 1.638 - 0.895 - - - 0.743 - - - purine nucleoside phosphorylase 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2553]
8. brd1b ENSDARG00000051798 1712 1.627 - 0.747 - - - 0.880 - - - bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
9. pop5 ENSDARG00000053452 1347 1.626 - 0.718 - - - 0.908 - - - POP5 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050320-123]
10. cdkn2c ENSDARG00000057610 179 1.61 - 0.732 - - - 0.878 - - - cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-081104-145]
11. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 1.609 - 0.764 - - - 0.845 - - - small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
12. nr1d2b ENSDARG00000009594 1144 1.595 - - - - - 0.874 - 0.721 - nuclear receptor subfamily 1, group D, member 2b [Source:ZFIN;Acc:ZDB-GENE-990415-244]
13. dennd1b ENSDARG00000101868 328 1.592 - - - - - 0.850 - 0.742 - DENN/MADD domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060503-16]
14. scinla_1 ENSDARG00000102415, ENSDARG00000117110 544 1.581 - 0.717 - - - 0.864 - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
15. ADAMTSL4 ENSDARG00000063407 1045 1.562 0.751 - - - - 0.811 - - - ADAMTS like 4 [Source:HGNC Symbol;Acc:HGNC:19706]
16. gtf2f2a ENSDARG00000069910 1027 1.543 - 0.799 - - - 0.744 - - - general transcription factor IIF, polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-040625-131]
17. ppil1 ENSDARG00000015422 1353 1.517 - 0.730 - - - 0.787 - - - peptidylprolyl isomerase (cyclophilin)-like 1 [Source:ZFIN;Acc:ZDB-GENE-051009-1]
18. asf1bb ENSDARG00000043713 2340 1.516 - - - - - 0.741 0.775 - - anti-silencing function 1Bb histone chaperone [Source:ZFIN;Acc:ZDB-GENE-040426-2594]
19. elovl7a ENSDARG00000069279, ENSDARG00000114975 1963 1.505 - 0.721 - - - 0.784 - - - ELOVL fatty acid elongase 7a [Source:ZFIN;Acc:ZDB-GENE-030131-6149]
20. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.504 0.724 0.780 - - - - - - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
21. tgm1 ENSDARG00000017799 442 1.479 - 0.745 - - - 0.734 - - - transglutaminase 1, K polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-9032]
22. cops5 ENSDARG00000057624 1485 1.458 - - - - - 0.705 - 0.753 - COP9 signalosome subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1686]
23. fryl ENSDARG00000040001 3256 1.457 - 0.724 - - - 0.733 - - - furry homolog, like [Source:ZFIN;Acc:ZDB-GENE-040914-58]
24. arid1aa ENSDARG00000101710 3644 1.434 - 0.707 - - - - - 0.727 - AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
25. CABZ01084579.1 CABZ01084579.1 7181 1.418 0.711 0.707 - - - - - - -
26. slc39a10 ENSDARG00000005823 2634 0.963 - - - - - 0.963 - - - solute carrier family 39 (zinc transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1157]
27. sra1 ENSDARG00000053619 2799 0.951 - - - - - 0.951 - - - steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
28. ppp1r12a ENSDARG00000010784 4333 0.944 - - - - - 0.944 - - - protein phosphatase 1, regulatory subunit 12A [Source:ZFIN;Acc:ZDB-GENE-041011-3]
29. phf14 ENSDARG00000061458 492 0.94 - - - - - 0.940 - - - PHD finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-030131-1796]
30. foxo1b ENSDARG00000061549 790 0.937 - - - - - 0.937 - - - forkhead box O1 b [Source:ZFIN;Acc:ZDB-GENE-080425-3]
31. smg7 ENSDARG00000060767 2759 0.929 - - - - - 0.929 - - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
32. zgc:101569 ENSDARG00000038876 1525 0.928 - - - - - 0.928 - - - zgc:101569 [Source:ZFIN;Acc:ZDB-GENE-041010-72]
33. gnpnat1 ENSDARG00000039892 709 0.925 - - - - - 0.925 - - - glucosamine-phosphate N-acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-450]
34. FBXW12 FBXW12 658 0.922 - - - - - 0.922 - - -
35. elp3 ENSDARG00000042005 936 0.921 - - - - - 0.921 - - - elongator acetyltransferase complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050327-35]
36. DUOXA1 DUOXA1 278 0.918 - - - - - 0.918 - - -
37. fkbp2 ENSDARG00000044540 1615 0.917 - - - - - 0.917 - - - FK506 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-126]
38. fam105bb fam105bb 1253 0.914 - - - - - 0.914 - - -
39. cux1b ENSDARG00000043134 641 0.914 - - - - - 0.914 - - - cut-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040801-260]
40. snrnp200 ENSDARG00000077536, ENSDARG00000114486 4981 0.912 - - - - - 0.912 - - - small nuclear ribonucleoprotein 200 (U5) [Source:ZFIN;Acc:ZDB-GENE-081105-64]
41. zgc:175214 ENSDARG00000022891 1013 0.912 - - - - - 0.912 - - - zgc:175214 [Source:ZFIN;Acc:ZDB-GENE-080303-32]
42. ARSJ ENSDARG00000077590 684 0.911 - - - - - 0.911 - - - arylsulfatase family, member J [Source:ZFIN;Acc:ZDB-GENE-111215-1]
43. csnk1g2a ENSDARG00000005458 2917 0.911 - - - - - 0.911 - - - casein kinase 1, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6445]
44. rab35 rab35 1287 0.911 - - - - - 0.911 - - -
45. si:ch73-367f21.4 ENSDARG00000071097 862 0.911 - - - - - 0.911 - - - si:ch73-367f21.4 [Source:ZFIN;Acc:ZDB-GENE-120214-27]
46. zmym4 ENSDARG00000035823 347 0.911 - - - - - 0.911 - - - zinc finger, MYM-type 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5459]
47. CABZ01057013.1 CABZ01057013.1 1308 0.91 - - - - - 0.910 - - -
48. rassf9 ENSDARG00000074721 448 0.909 - - - - - 0.909 - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 [Source:ZFIN;Acc:ZDB-GENE-091204-470]
49. CABZ01084815.1 CABZ01084815.1 351 0.909 - - - - - 0.909 - - -
50. tmem180 tmem180 430 0.908 - - - - - 0.908 - - -
51. PVRL4_1 PVRL4_1 702 0.908 - - - - - 0.908 - - -
52. fam177a1 ENSDARG00000079636 2391 0.907 - - - - - 0.907 - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
53. CU856359.1 CU856359.1 517 0.906 - - - - - 0.906 - - -
54. rhogd ENSDARG00000030608, ENSDARG00000112157 599 0.906 - - - - - 0.906 - - - ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
55. si:ch211-191j22.3 ENSDARG00000095459 959 0.905 - - - - - 0.905 - - - si:ch211-191j22.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4242]
56. ctcf ENSDARG00000056621, ENSDARG00000113285 1750 0.904 - - - - - 0.904 - - - CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5]
57. ck2b ck2b 781 0.904 - - - - - 0.904 - - -
58. mogat3b ENSDARG00000003635 394 0.904 - - - - - 0.904 - - - monoacylglycerol O-acyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-110302-2]
59. utp6 ENSDARG00000098433, ENSDARG00000114878, ENSDARG00000116788 1262 0.903 - - - - - 0.903 - - - UTP6, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-769]
60. si:ch211-210c8.6 ENSDARG00000017811 908 0.902 - - - - - 0.902 - - - si:ch211-210c8.6 [Source:ZFIN;Acc:ZDB-GENE-030131-3630]
61. kctd9 kctd9 973 0.902 - - - - - 0.902 - - -
62. mrpl10 ENSDARG00000045091, ENSDARG00000112205 1187 0.901 - - - - - 0.901 - - - mitochondrial ribosomal protein L10 [Source:ZFIN;Acc:ZDB-GENE-050320-19]
63. FP103059.1 FP103059.1 750 0.9 - - - - - 0.900 - - -
64. magt1 ENSDARG00000058062 3903 0.9 - - - - - 0.900 - - - magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
65. adhfe1 ENSDARG00000053518 499 0.9 - - - - - 0.900 - - - alcohol dehydrogenase, iron containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2070]
66. dnajc5ga ENSDARG00000041896 1478 0.899 - - - - - 0.899 - - - DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a [Source:ZFIN;Acc:ZDB-GENE-030131-1583]
67. arhgap10 ENSDARG00000078326 994 0.899 - - - - - 0.899 - - - Rho GTPase activating protein 10 [Source:ZFIN;Acc:ZDB-GENE-060512-221]
68. myh14 ENSDARG00000073732 502 0.899 - - - - - 0.899 - - - myosin, heavy chain 14, non-muscle [Source:ZFIN;Acc:ZDB-GENE-100921-1]
69. tmem18 ENSDARG00000036704 1784 0.898 - - - - - 0.898 - - - transmembrane protein 18 [Source:ZFIN;Acc:ZDB-GENE-040927-26]
70. hig1 hig1 2493 0.898 - - - - - 0.898 - - -
71. rrbp1a ENSDARG00000013763 4723 0.896 - - - - - 0.896 - - - ribosome binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9795]
72. cdc34b ENSDARG00000012627 3879 0.896 - - - - - 0.896 - - - cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
73. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 0.896 - - - - - 0.896 - - - aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
74. si:ch211-208h7.4 si:ch211-208h7.4 1334 0.895 - 0.895 - - - - - - -
75. rwdd ENSDARG00000068256 964 0.895 - - - - - 0.895 - - - RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
76. xrcc1 ENSDARG00000009494 1346 0.895 - - - - - 0.895 - - - X-ray repair complementing defective repair in Chinese hamster cells 1 [Source:ZFIN;Acc:ZDB-GENE-040822-30]
77. klhl11 ENSDARG00000045130 800 0.894 - - - - - 0.894 - - - kelch-like family member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5524]
78. setd2 ENSDARG00000062244 808 0.894 - - - - - 0.894 - - - SET domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2140]
79. CACHD1 ENSDARG00000061590 1287 0.893 - - - - - 0.893 - - - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]
80. ptpn23a ENSDARG00000070124 1206 0.893 - - - - - 0.893 - - - protein tyrosine phosphatase, non-receptor type 23, a [Source:ZFIN;Acc:ZDB-GENE-100921-24]
81. mxd3 ENSDARG00000098350 3040 0.893 - - - - - 0.893 - - - MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
82. C2H6orf52 C2H6orf52 2847 0.893 - - - - - 0.893 - - -
83. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 0.892 - - - - - 0.892 - - - heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
84. zdhhc9 ENSDARG00000060515 981 0.892 - - - - - 0.892 - - - zinc finger, DHHC-type containing 9 [Source:ZFIN;Acc:ZDB-GENE-071004-8]
85. cldnb ENSDARG00000009544 6036 0.892 - - - - - 0.892 - - - claudin b [Source:ZFIN;Acc:ZDB-GENE-010328-2]
86. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 0.891 - - - - - 0.891 - - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
87. si:dkey-240e12.6 ENSDARG00000110137 674 0.89 - - - - - 0.890 - - - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
88. grp ENSDARG00000043074 747 0.889 - - - - - 0.889 - - - gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
89. prrx1a ENSDARG00000033971 1786 0.888 - - - - - 0.888 - - - paired related homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020905-5]
90. dlgap4a ENSDARG00000060849 1813 0.888 - 0.888 - - - - - - - discs, large (Drosophila) homolog-associated protein 4a [Source:ZFIN;Acc:ZDB-GENE-080219-51]
91. ccdc25 ENSDARG00000021753 3837 0.888 - - - - - 0.888 - - - coiled-coil domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1389]
92. si:ch211-139n6.3 ENSDARG00000093230 147 0.888 - - - - - 0.888 - - - si:ch211-139n6.3 [Source:ZFIN;Acc:ZDB-GENE-041111-114]
93. psmg2 ENSDARG00000035987 1938 0.887 - - - - - 0.887 - - - proteasome (prosome, macropain) assembly chaperone 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1972]
94. apeh ENSDARG00000008703 694 0.887 - - - - - 0.887 - - - acylaminoacyl-peptide hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-9870]
95. ZACN ZACN 502 0.886 - - - - - 0.886 - - -
96. si:dkey-92i15.4 ENSDARG00000078387 428 0.886 - - - - - 0.886 - - - si:dkey-92i15.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8422]
97. pip5k1ab ENSDARG00000024642 1988 0.886 - - - - - 0.886 - - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b [Source:ZFIN;Acc:ZDB-GENE-041111-123]
98. gpr143 ENSDARG00000034572 559 0.886 - - - - - 0.886 - - - G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
99. C6H2orf40 C6H2orf40 4224 0.886 - - - - - 0.886 - - -
100. ELMO3 ENSDARG00000042126, ENSDARG00000110625 1900 0.886 - - - - - 0.886 - - - engulfment and cell motility 3 [Source:ZFIN;Acc:ZDB-GENE-050309-39]

There are 1172 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA