Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for smc5

Gene Name Gene ID Reads Annotation
smc5 ENSDARG00000044282 779 structural maintenance of chromosomes 5 [Source:ZFIN;Acc:ZDB-GENE-061013-288]










Genes with expression patterns similar to smc5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smc5 ENSDARG00000044282 779 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 structural maintenance of chromosomes 5 [Source:ZFIN;Acc:ZDB-GENE-061013-288]
2. socs3a ENSDARG00000025428 349 1.887 - - - 0.892 - - 0.995 - - suppressor of cytokine signaling 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7349]
3. illr4 ENSDARG00000008075 164 1.873 - - - 0.879 - - 0.994 - - immune-related, lectin-like receptor 4 [Source:ZFIN;Acc:ZDB-GENE-050311-5]
4. fgfr3 ENSDARG00000004782, ENSDARG00000114756 1791 1.83 - - - - - 0.833 0.997 - - fibroblast growth factor receptor 3 [Source:ZFIN;Acc:ZDB-GENE-000816-1]
5. laptm4a ENSDARG00000006397 1698 1.817 0.825 - - - - - 0.992 - - lysosomal protein transmembrane 4 alpha [Source:ZFIN;Acc:ZDB-GENE-030131-1024]
6. VPS37C ENSDARG00000031836 906 1.808 - - - - - - 0.995 0.813 - vacuolar protein sorting 37 homolog C (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061110-126]
7. prim1 ENSDARG00000040163 909 1.797 - 0.802 - - - - 0.995 - - DNA primase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-990603-6]
8. fbxo30a ENSDARG00000058561 867 1.775 - 0.787 - - - - 0.988 - - F-box protein 30a [Source:ZFIN;Acc:ZDB-GENE-040426-1215]
9. cbx8a_1 ENSDARG00000087327 109 1.763 - - - 0.901 - - - 0.862 - chromobox homolog 8a (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040405-1]
10. ZFYVE1 ENSDARG00000078652 631 1.754 - - - - - - 0.992 - 0.762 zinc finger, FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-131205-1]
11. grk5 ENSDARG00000032801 490 1.749 - - - - - - 0.982 0.767 - G protein-coupled receptor kinase 5 [Source:ZFIN;Acc:ZDB-GENE-091204-274]
12. BX957278.1 ENSDARG00000010940 317 1.748 - - - - - - 0.984 0.764 -
13. si:ch211-51o18.2 si:ch211-51o18.2 111 1.718 0.723 - - - - - 0.995 - -
14. eftud2 ENSDARG00000012261 3081 1.717 - 0.735 - - - - 0.982 - - elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
15. rras2 ENSDARG00000036252, ENSDARG00000111642 1714 1.716 - - - - - - 0.995 0.721 - RAS related 2 [Source:ZFIN;Acc:ZDB-GENE-050417-352]
16. asb3 ENSDARG00000005246 317 1.707 - - - 0.712 - - 0.995 - - ankyrin repeat and SOCS box containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6142]
17. trappc13 ENSDARG00000033768 1311 1.705 - 0.718 - - - - 0.987 - - trafficking protein particle complex 13 [Source:ZFIN;Acc:ZDB-GENE-030131-9775]
18. tmem184a ENSDARG00000104538 661 1.697 - - - - - - 0.962 0.735 - transmembrane protein 184a [Source:ZFIN;Acc:ZDB-GENE-040426-2925]
19. mpzl3 959 1.693 - - - - - - 0.972 - 0.721 myelin protein zero-like 3
20. tyms ENSDARG00000042894 3068 1.687 - - - 0.730 - - 0.957 - - thymidylate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-59]
21. wdr82 ENSDARG00000014083 3159 1.684 0.710 - - - - - 0.974 - - WD repeat domain 82 [Source:ZFIN;Acc:ZDB-GENE-030131-333]
22. si:dkey-122c11.9 si:dkey-122c11.9 227 1.662 - 0.787 - - - - - 0.875 -
23. idh3g ENSDARG00000023648 4877 1.652 0.745 - - - - - 0.907 - - isocitrate dehydrogenase 3 (NAD+) gamma [Source:ZFIN;Acc:ZDB-GENE-050417-435]
24. MFAP3L ENSDARG00000062752, ENSDARG00000115337 1373 1.652 - - - - - - 0.940 0.712 - microfibril associated protein 3 like [Source:ZFIN;Acc:ZDB-GENE-111229-2]
25. atp6v1c1b ENSDARG00000035880, ENSDARG00000112507 1869 1.641 - - - - - - 0.924 0.717 - ATPase H+ transporting V1 subunit C1b [Source:ZFIN;Acc:ZDB-GENE-041010-104]
26. dpm3 ENSDARG00000058650 4386 1.624 - - - - - - 0.923 - 0.701 dolichyl-phosphate mannosyltransferase polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1782]
27. gfra4 gfra4 287 1.612 0.742 - - 0.870 - - - - -
28. CABZ01006828.1 CABZ01006828.1 410 1.61 - - - 0.750 - - - 0.860 -
29. zgc:163143 ENSDARG00000076437 166 1.591 0.750 - - 0.841 - - - - - zgc:163143 [Source:ZFIN;Acc:ZDB-GENE-070410-143]
30. elovl2 ENSDARG00000045414 119 1.58 0.708 - - 0.872 - - - - - ELOVL fatty acid elongase 2 [Source:ZFIN;Acc:ZDB-GENE-060421-5612]
31. ift27 ENSDARG00000099279 393 1.574 - - - 0.719 - - - 0.855 - intraflagellar transport 27 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-041212-9]
32. ppp1r10 ENSDARG00000032651 1465 1.573 - - - 0.824 - - - 0.749 - protein phosphatase 1, regulatory subunit 10 [Source:ZFIN;Acc:ZDB-GENE-020419-15]
33. jarid2a ENSDARG00000060925 172 1.556 - - - 0.816 - - - - 0.740 jumonji, AT rich interactive domain 2a [Source:ZFIN;Acc:ZDB-GENE-061218-1]
34. DSN1 ENSDARG00000089922 269 1.525 0.759 - - 0.766 - - - - - DSN1 homolog, MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-170110-2]
35. daw1 ENSDARG00000021462 283 1.508 - - - 0.729 - - - 0.779 - dynein assembly factor with WDR repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-050419-255]
36. cnot10 ENSDARG00000058528 478 1.494 0.749 - - 0.745 - - - - - CCR4-NOT transcription complex, subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060929-368]
37. si:dkey-18f7.2 si:dkey-18f7.2 895 1.485 - 0.736 - 0.749 - - - - -
38. ttll9 ENSDARG00000062806 89 1.47 - 0.751 - 0.719 - - - - - tubulin tyrosine ligase-like family, member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1582]
39. pcnxl4 377 1.461 0.751 - - 0.710 - - - - - pecanex-like 4 (Drosophila), transcript variant X2
40. si:dkey-122a22.2 ENSDARG00000095821 243 1.439 0.712 - - - - - - 0.727 - si:dkey-122a22.2 [Source:ZFIN;Acc:ZDB-GENE-110411-93]
41. fbxo22 ENSDARG00000053505 1275 1.404 - - - 0.701 - 0.703 - - - F-box protein 22 [Source:ZFIN;Acc:ZDB-GENE-040724-68]
42. lzic ENSDARG00000055899 638 0.997 - - - - - - 0.997 - - leucine zipper and CTNNBIP1 domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-342]
43. agk ENSDARG00000009837, ENSDARG00000113514 811 0.997 - - - - - - 0.997 - - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
44. BX324179.3 BX324179.3 326 0.996 - - - - - - 0.996 - -
45. PSD PSD 367 0.996 - - - - - - 0.996 - -
46. CABZ01068263.1 CABZ01068263.1 712 0.996 - - - - - - 0.996 - -
47. nhp2l1a nhp2l1a 993 0.996 - - - - - - 0.996 - -
48. pan3 ENSDARG00000031637, ENSDARG00000111004 613 0.996 - - - - - - 0.996 - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
49. plxna4 ENSDARG00000019328 782 0.996 - - - - - - 0.996 - - plexin A4 [Source:ZFIN;Acc:ZDB-GENE-030131-4663]
50. sult3st1 ENSDARG00000009885 218 0.996 - - - - - - 0.996 - - sulfotransferase family 3, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-061207-52]
51. znf687a ENSDARG00000102774 393 0.996 - - - - - - 0.996 - - zinc finger protein 687a [Source:ZFIN;Acc:ZDB-GENE-100922-32]
52. TMEM184B TMEM184B 1280 0.996 - - - - - - 0.996 - -
53. zgc:162612 ENSDARG00000079699 244 0.996 - - - - - - 0.996 - - zgc:162612 [Source:ZFIN;Acc:ZDB-GENE-070410-88]
54. ICT1 356 0.996 - - - - - - 0.996 - - immature colon carcinoma transcript 1
55. armc1l ENSDARG00000020887 1219 0.996 - - - - - - 0.996 - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
56. zgc:153372 ENSDARG00000068967 358 0.995 - - - - - - 0.995 - - zgc:153372 [Source:ZFIN;Acc:ZDB-GENE-060929-680]
57. papolg ENSDARG00000012141 1445 0.995 - - - - - - 0.995 - - poly(A) polymerase gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1256]
58. igfbp3 ENSDARG00000099144 269 0.995 - - - - - - 0.995 - - insulin-like growth factor binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040412-1]
59. PRR5 PRR5 630 0.995 - - - - - - 0.995 - -
60. unk ENSDARG00000000935 353 0.995 - - - - - - 0.995 - - unkempt family zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-707]
61. si:ch211-241o7.5 si:ch211-241o7.5 1387 0.995 - - - - - - 0.995 - -
62. dhodh ENSDARG00000051889 401 0.995 - - - - - - 0.995 - - dihydroorotate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-3157]
63. ZNF337_10 ZNF337_10 183 0.995 - - - - - - 0.995 - -
64. si:ch73-108h4.3 si:ch73-108h4.3 193 0.995 - - - - - - 0.995 - -
65. AL844567.1 AL844567.1 1605 0.995 - - - - - - 0.995 - -
66. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 0.995 - - - - - - 0.995 - - ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
67. zc3h18 ENSDARG00000062506 1676 0.995 - - - - - - 0.995 - - zinc finger CCCH-type containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-13]
68. tbccd1 ENSDARG00000056886, ENSDARG00000114427 1389 0.995 - - - - - - 0.995 - - TBCC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-222]
69. dnajb9a ENSDARG00000052072 578 0.995 - - - - - - 0.995 - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
70. baz2a ENSDARG00000102974 266 0.995 - - - - - - 0.995 - - bromodomain adjacent to zinc finger domain, 2A [Source:ZFIN;Acc:ZDB-GENE-041010-202]
71. FBXO31 ENSDARG00000062195 753 0.995 - - - - - - 0.995 - - F-box protein 31 [Source:ZFIN;Acc:ZDB-GENE-070628-4]
72. zgc:136763 zgc:136763 190 0.995 - - - - - - 0.995 - -
73. PLXNB2 PLXNB2 99 0.995 - - - - - - 0.995 - -
74. zgc:66014 817 0.995 - - - - - - 0.995 - - zgc:66014, transcript variant X6
75. zgc:63691 zgc:63691 180 0.995 - - - - - - 0.995 - -
76. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 0.995 - - - - - - 0.995 - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
77. SLITRK6 ENSDARG00000098769 217 0.995 - - - - - - 0.995 - - SLIT and NTRK-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2816]
78. prkaa1 ENSDARG00000060596 1448 0.995 - - - - - - 0.995 - - protein kinase, AMP-activated, alpha 1 catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030325-1]
79. CABZ01078889.1 CABZ01078889.1 911 0.995 - - - - - - 0.995 - -
80. EXO5 ENSDARG00000042727, ENSDARG00000111772 282 0.995 - - - - - - 0.995 - - exonuclease 5 [Source:ZFIN;Acc:ZDB-GENE-051113-108]
81. asb6 ENSDARG00000007125 389 0.995 - - - - - - 0.995 - - ankyrin repeat and SOCS box containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-338]
82. PDZD8 ENSDARG00000088699 844 0.994 - - - - - - 0.994 - - PDZ domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-110310-2]
83. ERRFI1 ERRFI1 664 0.994 - - - - - - 0.994 - -
84. ctdnep1a ENSDARG00000016519, ENSDARG00000115280 596 0.994 - - - - - - 0.994 - - CTD nuclear envelope phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-041114-177]
85. lppr4a lppr4a 141 0.994 - - - - - - 0.994 - -
86. AMDHD1 ENSDARG00000007366 89 0.994 - - - - - - 0.994 - - amidohydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28577]
87. sigmar1 ENSDARG00000011418 1240 0.994 - - - - - - 0.994 - - sigma non-opioid intracellular receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1006]
88. CAPN5 CAPN5 357 0.994 - - - - - - 0.994 - -
89. acn9 acn9 520 0.994 - - - - - - 0.994 - -
90. OCRL ENSDARG00000078106, ENSDARG00000115715, ENSDARG00000117019 317 0.994 - - - - - - 0.994 - - oculocerebrorenal syndrome of Lowe [Source:ZFIN;Acc:ZDB-GENE-061110-61]
91. zgc:173962 zgc:173962 67 0.994 - - - - - - 0.994 - -
92. dennd5b ENSDARG00000003789 1152 0.994 - - - - - - 0.994 - - DENN/MADD domain containing 5B [Source:ZFIN;Acc:ZDB-GENE-030131-2248]
93. mrps7 ENSDARG00000101622 889 0.994 - - - - - - 0.994 - - mitochondrial ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-050809-112]
94. gbas gbas 735 0.994 - - - - - - 0.994 - -
95. PRKD3 ENSDARG00000079967 192 0.994 - - - - - - 0.994 - - protein kinase D3 [Source:ZFIN;Acc:ZDB-GENE-130530-880]
96. prdm5 ENSDARG00000006288 472 0.994 - - - - - - 0.994 - - PR domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040708-1]
97. mpdu1b ENSDARG00000040265 1968 0.994 - - - - - - 0.994 - - mannose-P-dolichol utilization defect 1b [Source:ZFIN;Acc:ZDB-GENE-040625-135]
98. plekhh1 ENSDARG00000053835 2123 0.994 - - - - - - 0.994 - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
99. rac3b ENSDARG00000020795 1523 0.994 - - - - - - 0.994 - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
100. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 0.994 - - - - - - 0.994 - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]

There are 1260 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA