Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for smc2

Gene Name Gene ID Reads Annotation
smc2 ENSDARG00000017744, ENSDARG00000114076 2271 structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]










Genes with expression patterns similar to smc2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
2. hnrnpub ENSDARG00000004735 16496 3.012 - - - 0.715 0.793 - 0.700 - 0.804 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
3. sin3ab ENSDARG00000059812 2140 2.567 - - - 0.861 0.853 - 0.853 - - SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
4. gpm6bb ENSDARG00000001676 2005 2.47 - - - 0.922 - - 0.807 - 0.741 glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
5. max ENSDARG00000024844 6035 2.437 - - - 0.867 0.812 - - - 0.758 myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
6. rybpa ENSDARG00000037773 904 2.42 - - - 0.885 - - - 0.834 0.701 RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
7. papolg ENSDARG00000012141 1445 2.418 - - - 0.814 0.875 - - - 0.729 poly(A) polymerase gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1256]
8. CABZ01080568.2 CABZ01080568.2 2137 2.392 - - - 0.844 0.836 - - - 0.712
9. cxxc1 cxxc1 914 2.377 - 0.708 - 0.901 0.768 - - - -
10. ldb1a ENSDARG00000010137 3035 2.369 - 0.720 - 0.862 - - - - 0.787 LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
11. mycla ENSDARG00000006003 1866 2.361 - - - - 0.822 - 0.742 0.797 - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
12. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.356 - - - 0.848 - - 0.797 - 0.711 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
13. nup93 ENSDARG00000003487, ENSDARG00000111433 2474 2.287 - - - - 0.775 0.776 - - 0.736 nucleoporin 93 [Source:ZFIN;Acc:ZDB-GENE-990415-46]
14. camlg ENSDARG00000100409 2157 2.275 - - - - 0.789 - 0.785 - 0.701 calcium modulating ligand [Source:ZFIN;Acc:ZDB-GENE-040426-2407]
15. inip ENSDARG00000028523 1925 2.272 - - - 0.841 - - 0.713 - 0.718 ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
16. pou3f3a ENSDARG00000042032 2835 2.247 - - - 0.719 - - - 0.764 0.764 POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
17. rbb4 rbb4 15541 2.246 - - 0.741 - - - 0.737 - 0.768
18. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 2.234 - 0.708 - - 0.805 - 0.721 - - LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
19. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 2.224 0.752 - - - 0.752 - 0.720 - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
20. cbx2 ENSDARG00000044938 1576 2.212 - - 0.706 0.765 - - - - 0.741 chromobox homolog 2 (Drosophila Pc class) [Source:ZFIN;Acc:ZDB-GENE-030131-5502]
21. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 2.204 - - - - 0.741 - 0.736 - 0.727 chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
22. phf21ab ENSDARG00000021378 1706 2.15 - - 0.708 - - 0.703 - 0.739 - PHD finger protein 21Ab [Source:ZFIN;Acc:ZDB-GENE-030131-6456]
23. vdac1 ENSDARG00000045132 8051 2.149 - 0.710 - - 0.715 - 0.724 - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
24. snrpd3l ENSDARG00000076283 7655 2.129 - - 0.701 - - - 0.708 - 0.720 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
25. nat15 ENSDARG00000061185 396 1.826 - 0.948 - 0.878 - - - - - N-acetyltransferase 15 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-041111-143]
26. usp49 ENSDARG00000000229 706 1.765 - - - 0.948 0.817 - - - - ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
27. ppig ENSDARG00000044431 3427 1.733 - - - 0.921 0.812 - - - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
28. nr2f1b ENSDARG00000017168 1487 1.699 - - - 0.876 0.823 - - - - nuclear receptor subfamily 2, group F, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1438]
29. marcksa ENSDARG00000004049 2518 1.693 - - - 0.910 - - - - 0.783 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
30. tardbp ENSDARG00000040031, ENSDARG00000115667 13815 1.692 - - - 0.904 - - 0.788 - - TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]
31. plagx ENSDARG00000036855 3768 1.687 - - - 0.960 - - 0.727 - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
32. usp42 ENSDARG00000077300 926 1.684 - - - 0.870 - - 0.814 - - ubiquitin specific peptidase 42 [Source:ZFIN;Acc:ZDB-GENE-030131-5739]
33. tbx2a ENSDARG00000018025, ENSDARG00000109541 1183 1.682 - - - 0.902 0.780 - - - - T-box 2a [Source:ZFIN;Acc:ZDB-GENE-990917-4]
34. prr11 ENSDARG00000087393 677 1.678 - - - 0.883 0.795 - - - - proline rich 11 [Source:ZFIN;Acc:ZDB-GENE-091118-97]
35. C2H1orf35 C2H1orf35 652 1.676 - - - 0.894 0.782 - - - -
36. snai1a ENSDARG00000056995 1427 1.669 - 0.840 - 0.829 - - - - - snail family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-990415-255]
37. hif1an ENSDARG00000031915 2098 1.669 - - - 0.908 - - - - 0.761 hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
38. PLEKHG1 2100 1.669 - - - - 0.834 - - 0.835 - pleckstrin homology and RhoGEF domain containing G1, transcript variant X2
39. eif3d ENSDARG00000021257 1524 1.666 - - - 0.856 - - 0.810 - - eukaryotic translation initiation factor 3, subunit D [Source:ZFIN;Acc:ZDB-GENE-030131-8442]
40. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 1.66 - - - 0.896 0.764 - - - - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
41. TTF1_5 TTF1_5 705 1.658 - - - 0.888 0.770 - - - -
42. tdrd3 ENSDARG00000025421 633 1.656 - 0.743 - 0.913 - - - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
43. crp4 714 1.655 - - - 0.855 0.800 - - - - C-reactive protein 4
44. celf3a ENSDARG00000034668 2432 1.651 - - - - 0.786 - 0.865 - - cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
45. sfxn1 ENSDARG00000019963 1689 1.643 - 0.886 - - 0.757 - - - - sideroflexin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-45]
46. adrm1 ENSDARG00000058560, ENSDARG00000113912 1728 1.64 - - - 0.874 - - - 0.766 - adhesion regulating molecule 1 [Source:ZFIN;Acc:ZDB-GENE-040426-905]
47. ftr67 ENSDARG00000098820 611 1.636 - 0.861 - - 0.775 - - - - finTRIM family, member 67 [Source:ZFIN;Acc:ZDB-GENE-060312-27]
48. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.636 - - - 0.878 - - 0.758 - - SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
49. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.63 - - - 0.853 0.777 - - - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
50. LANCL2 ENSDARG00000045465 1221 1.628 - - - 0.897 - - 0.731 - - LanC lantibiotic synthetase component C-like 2 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-070209-191]
51. C8H1orf106 C8H1orf106 2690 1.625 - - - 0.902 - - - - 0.723
52. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 1.624 - 0.889 - - - - - 0.735 - ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
53. rtf1 ENSDARG00000008947 6596 1.62 - - - - 0.859 - - - 0.761 RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
54. wrap53 ENSDARG00000086150 975 1.618 - - - 0.888 - - - 0.730 - WD repeat containing, antisense to TP53 [Source:ZFIN;Acc:ZDB-GENE-030131-515]
55. ikbkg ENSDARG00000017037 1225 1.609 - - - 0.787 0.822 - - - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma [Source:ZFIN;Acc:ZDB-GENE-050327-68]
56. noc4l ENSDARG00000045565 1337 1.607 - - - 0.858 - - - 0.749 - nucleolar complex associated 4 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-98]
57. nudc ENSDARG00000104837 1798 1.607 - 0.867 - - - - - 0.740 - nudC nuclear distribution protein [Source:ZFIN;Acc:ZDB-GENE-040426-899]
58. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 1.603 - - - 0.794 0.809 - - - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
59. rac3b ENSDARG00000020795 1523 1.595 - 0.713 - 0.882 - - - - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
60. ctcf ENSDARG00000056621, ENSDARG00000113285 1750 1.594 - - - 0.878 - - - - 0.716 CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5]
61. zdhhc6 ENSDARG00000075721 1494 1.593 - 0.711 - 0.882 - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
62. actl6a ENSDARG00000070828, ENSDARG00000115348 1961 1.589 - - - - 0.809 - - - 0.780 actin-like 6A [Source:ZFIN;Acc:ZDB-GENE-020419-36]
63. wasf3 wasf3 3287 1.589 - - - - 0.820 - 0.769 - -
64. prrc2a ENSDARG00000031494 2217 1.587 0.715 - - 0.872 - - - - - proline-rich coiled-coil 2A [Source:ZFIN;Acc:ZDB-GENE-010501-4]
65. bbs4 ENSDARG00000063522 247 1.587 - 0.729 - 0.858 - - - - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
66. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.586 - - - 0.820 - - - - 0.766 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
67. LPHN2 LPHN2 1971 1.583 - - - 0.780 0.803 - - - -
68. nup210 ENSDARG00000063333 995 1.583 - - - 0.827 0.756 - - - - nucleoporin 210 [Source:ZFIN;Acc:ZDB-GENE-050208-132]
69. cbx4 ENSDARG00000099441 372 1.581 - - - 0.817 0.764 - - - - chromobox homolog 4 (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040329-2]
70. mgll ENSDARG00000036820 747 1.576 - - - 0.872 0.704 - - - - monoglyceride lipase [Source:ZFIN;Acc:ZDB-GENE-031006-9]
71. usp1 ENSDARG00000056414 1816 1.574 - - - 0.873 - - - - 0.701 ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
72. sephs1 ENSDARG00000058292 3347 1.574 - - - 0.854 - - - - 0.720 selenophosphate synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3670]
73. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.572 - - - 0.817 - - - - 0.755 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
74. dctd ENSDARG00000036990 2168 1.572 - - - - 0.853 - - 0.719 - dCMP deaminase [Source:ZFIN;Acc:ZDB-GENE-050417-116]
75. epb41l4a ENSDARG00000040087 1013 1.57 - 0.731 - 0.839 - - - - - erythrocyte membrane protein band 4.1 like 4A [Source:ZFIN;Acc:ZDB-GENE-990415-20]
76. ptbp1b ENSDARG00000031907, ENSDARG00000115714 3808 1.569 - - - - 0.748 - - 0.821 - polypyrimidine tract binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9796]
77. adssl ENSDARG00000012399 2271 1.569 - - 0.782 - 0.787 - - - - adenylosuccinate synthase, like [Source:ZFIN;Acc:ZDB-GENE-020419-28]
78. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.567 - - - 0.864 0.703 - - - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
79. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.565 - - - - 0.859 - 0.706 - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
80. scoca ENSDARG00000087333 1739 1.565 - - - 0.863 - - 0.702 - - short coiled-coil protein a [Source:ZFIN;Acc:ZDB-GENE-061013-114]
81. eif4h ENSDARG00000042252 6742 1.564 - - - 0.819 - - - - 0.745 eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
82. her8a ENSDARG00000016363 996 1.563 - - - - 0.826 - - - 0.737 hairy-related 8a [Source:ZFIN;Acc:ZDB-GENE-030131-2376]
83. UBE2QL1 ENSDARG00000079276 3474 1.561 - - - 0.782 - - 0.779 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
84. creb1a ENSDARG00000053586 5068 1.557 - - - - - - 0.772 - 0.785 cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
85. wu:fb54a03 wu:fb54a03 1722 1.555 - - - - 0.791 0.764 - - -
86. ddx27 ENSDARG00000091831 1471 1.555 - - - 0.785 0.770 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
87. sart1 ENSDARG00000005945 1832 1.555 - - - - 0.850 - 0.705 - - SART1, U4/U6.U5 tri-snRNP-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040718-422]
88. ST7 ENSDARG00000039960, ENSDARG00000112691 2020 1.554 - - - - 0.822 - - 0.732 - suppression of tumorigenicity 7 [Source:ZFIN;Acc:ZDB-GENE-060421-2807]
89. ppp1r7 ENSDARG00000009740 2606 1.553 - 0.816 - - - - 0.737 - - protein phosphatase 1, regulatory (inhibitor) subunit 7 [Source:ZFIN;Acc:ZDB-GENE-051113-288]
90. parp1 ENSDARG00000019529 6787 1.55 - - 0.774 - - - - - 0.776 poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
91. srsf2b ENSDARG00000103893 1437 1.549 - - 0.828 - - - 0.721 - - serine/arginine-rich splicing factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2420]
92. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.548 - - - - 0.829 - 0.719 - - euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
93. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.548 - - - - 0.732 - - - 0.816 si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
94. smg5 ENSDARG00000041481 1286 1.544 - - - - 0.807 - - - 0.737 SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
95. slc2a8 ENSDARG00000104278 764 1.543 - - - - 0.794 - - 0.749 - solute carrier family 2 (facilitated glucose transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-030829-25]
96. snrpd1 ENSDARG00000011648 8615 1.541 - - 0.769 - 0.772 - - - - small nuclear ribonucleoprotein D1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-020419-14]
97. lrp12 ENSDARG00000098845 999 1.539 - - - - 0.758 - 0.781 - - low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]
98. CXXC5 CXXC5 1332 1.539 - - - 0.730 - - 0.809 - -
99. zgc:114130 ENSDARG00000040725, ENSDARG00000116854 806 1.537 - - - - 0.820 - 0.717 - - zgc:114130 [Source:ZFIN;Acc:ZDB-GENE-050913-48]
100. dut ENSDARG00000106529 3120 1.537 - - - - 0.792 0.745 - - - deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]

There are 1728 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA