Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for slit3

Gene Name Gene ID Reads Annotation
slit3 ENSDARG00000034268, ENSDARG00000111488, ENSDARG00000115194 3999 slit homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-4]










Genes with expression patterns similar to slit3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. slit3 ENSDARG00000034268, ENSDARG00000111488, ENSDARG00000115194 3999 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 slit homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-4]
2. edf1 ENSDARG00000009950 10518 2.657 - 0.751 - - - - 0.991 0.915 - endothelial differentiation-related factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1710]
3. st13 ENSDARG00000021973 7787 2.406 - - - - - 0.790 - 0.863 0.753 ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
4. cxcr4b ENSDARG00000041959 2322 2.39 - - - - - 0.707 - 0.744 0.939 chemokine (C-X-C motif), receptor 4b [Source:ZFIN;Acc:ZDB-GENE-010614-1]
5. fkbp8 ENSDARG00000001734 1709 1.905 - - - - - - - 0.953 0.952 FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
6. necap2 ENSDARG00000046002 4372 1.883 - - - - - - - 0.938 0.945 NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
7. cd164 ENSDARG00000013628 21750 1.867 - - - - - - 0.955 0.912 - CD164 molecule, sialomucin [Source:ZFIN;Acc:ZDB-GENE-030131-1598]
8. esrp1 ENSDARG00000011245 2097 1.852 - - - - - - - 0.915 0.937 epithelial splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1732]
9. fam46c 1913 1.849 - 0.898 - - - - - 0.951 - family with sequence similarity 46, member C
10. ppa1b ENSDARG00000030441 9027 1.828 - - - - - - 0.997 - 0.831 pyrophosphatase (inorganic) 1b [Source:ZFIN;Acc:ZDB-GENE-050417-375]
11. dpp3 ENSDARG00000020676 2393 1.814 - - - - - - - 0.869 0.945 dipeptidyl-peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1247]
12. alas2 ENSDARG00000038643, ENSDARG00000113125 4935 1.809 - 0.812 - - - - 0.997 - - aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
13. tmpoa ENSDARG00000007315 3638 1.803 - - - - - 0.880 - - 0.923 thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
14. hoxb3a ENSDARG00000029263 5493 1.79 - - - - - - 0.998 0.792 - homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
15. zranb2 ENSDARG00000044332 6723 1.78 - 0.782 - - - - 0.998 - - zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
16. atp6v0d1 ENSDARG00000069090, ENSDARG00000115876 4797 1.777 - - - - - - 0.998 - 0.779 ATPase H+ transporting V0 subunit d1 [Source:ZFIN;Acc:ZDB-GENE-030131-1531]
17. fundc2 ENSDARG00000103740 3856 1.775 - 0.778 - - - - 0.997 - - fun14 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041010-26]
18. timm13 ENSDARG00000058297 4447 1.768 - 0.770 - - - - 0.998 - - translocase of inner mitochondrial membrane 13 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-167]
19. tfe3a ENSDARG00000098903 1530 1.768 0.804 - - - - - - 0.964 - transcription factor binding to IGHM enhancer 3a [Source:ZFIN;Acc:ZDB-GENE-010919-2]
20. elmo1 ENSDARG00000098753 6966 1.765 - - - - - - 0.998 - 0.767 engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
21. mapk6 ENSDARG00000032103 6422 1.763 - 0.765 - - - - 0.998 - - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
22. rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 1.761 - 0.762 - - - - 0.999 - - regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]
23. akap12b ENSDARG00000055678, ENSDARG00000110544 8317 1.758 - 0.926 - - - - - - 0.832 A kinase (PRKA) anchor protein 12b [Source:ZFIN;Acc:ZDB-GENE-030131-9753]
24. rbms1a ENSDARG00000074023 2742 1.758 - - - - - 0.760 0.998 - - RNA binding motif, single stranded interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4967]
25. mri1 ENSDARG00000075754 2567 1.746 0.833 - - - - - - - 0.913 methylthioribose-1-phosphate isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-080204-109]
26. lsm12b ENSDARG00000109510 14459 1.741 - 0.758 - - - - 0.983 - - LSM12 homolog b [Source:ZFIN;Acc:ZDB-GENE-040426-2164]
27. ndufab1b ENSDARG00000014915 12796 1.734 - 0.820 - - - - - - 0.914 NADH:ubiquinone oxidoreductase subunit AB1b [Source:ZFIN;Acc:ZDB-GENE-030131-4437]
28. snrnp27 ENSDARG00000035625 9080 1.721 0.723 - - - - - 0.998 - - small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
29. sept9a ENSDARG00000020235 6881 1.709 - - - - - - 0.991 0.718 - septin 9a [Source:ZFIN;Acc:ZDB-GENE-030131-9187]
30. si:ch73-110p20.1 5932 1.702 - - - - - - 0.996 - 0.706 si:ch73-110p20.1
31. med6 ENSDARG00000034734 2711 1.699 - 0.701 - - - - 0.998 - - mediator complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040625-61]
32. gpc1b ENSDARG00000090585 1393 1.693 - 0.751 - - - - - - 0.942 glypican 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1306]
33. scaf4a ENSDARG00000077093 2408 1.691 - 0.746 - - - - - 0.945 - SR-related CTD-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9003]
34. lepre1 lepre1 5346 1.69 - 0.766 - - - - - - 0.924
35. prnprs3 ENSDARG00000003705 1854 1.688 - 0.767 - - - - - 0.921 - prion protein, related sequence 3 [Source:ZFIN;Acc:ZDB-GENE-041221-3]
36. hnrnpm ENSDARG00000061735 19428 1.686 - 0.708 - - - - 0.978 - - heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
37. puf60a ENSDARG00000032175 5618 1.683 - 0.732 - - - - - 0.951 - poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
38. rbm4.3 ENSDARG00000022129 28571 1.682 - - - - - - 0.953 - 0.729 RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
39. cyth1a ENSDARG00000005159, ENSDARG00000076742 2796 1.681 0.750 - - - - - - 0.931 - cytohesin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-657]
40. nap1l4b ENSDARG00000068868 3285 1.676 - - - - - 0.757 - - 0.919 nucleosome assembly protein 1-like 4b [Source:ZFIN;Acc:ZDB-GENE-041114-168]
41. kpna4 ENSDARG00000023190 2505 1.675 - 0.735 - - - - - - 0.940 karyopherin alpha 4 (importin alpha 3) [Source:ZFIN;Acc:ZDB-GENE-030131-5584]
42. azin1b ENSDARG00000035869, ENSDARG00000115647 9761 1.666 - 0.701 - - - - 0.965 - - antizyme inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-030121-1]
43. igfbp5b ENSDARG00000025348 3803 1.665 - 0.728 - - - - - 0.937 - insulin-like growth factor binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-040319-2]
44. si:ch211-22i13.2 ENSDARG00000043485 4719 1.663 - 0.718 - - - - - - 0.945 si:ch211-22i13.2 [Source:ZFIN;Acc:ZDB-GENE-041014-143]
45. gpx1a ENSDARG00000018146, ENSDARG00000114736 4652 1.655 - - - - - - - 0.856 0.799 glutathione peroxidase 1a [Source:ZFIN;Acc:ZDB-GENE-030410-1]
46. inip ENSDARG00000028523 1925 1.653 - 0.721 - - - - - 0.932 - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
47. kpna3 ENSDARG00000052641 5347 1.65 - 0.775 - - - - - - 0.875 karyopherin alpha 3 (importin alpha 4) [Source:ZFIN;Acc:ZDB-GENE-030616-541]
48. cnn3a ENSDARG00000099510 6063 1.648 - - - - - - - 0.882 0.766 calponin 3, acidic a [Source:ZFIN;Acc:ZDB-GENE-030131-5130]
49. hsbp1b ENSDARG00000041921 6170 1.631 - 0.719 - - - - - - 0.912 heat shock factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1721]
50. ppp2r2d ENSDARG00000102009 5710 1.615 - - - - - 0.721 - - 0.894 protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
51. frmd6 ENSDARG00000002332 2698 1.615 - 0.724 - - - - - - 0.891 FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
52. wu:fb17g07 wu:fb17g07 10567 1.593 - 0.749 - - - - - 0.844 -
53. psmd1 ENSDARG00000003189 4373 1.588 - 0.876 - - - 0.712 - - - proteasome 26S subunit, non-ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-810]
54. zgc:101640 733 1.587 0.708 - - - - - - - 0.879 zgc:101640, transcript variant X2
55. mgst3 mgst3 3982 1.586 - - - - - 0.741 - 0.845 -
56. cdk9 ENSDARG00000044811, ENSDARG00000111590 2524 1.57 - 0.760 - - - - - - 0.810 cyclin-dependent kinase 9 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-030131-321]
57. snrpe ENSDARG00000033175 7462 1.564 - 0.753 - - - - - - 0.811 small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
58. FP016176.1 FP016176.1 7030 1.561 - 0.728 - - - - - 0.833 -
59. chl1a ENSDARG00000077881 1488 1.559 0.732 - - - - - - - 0.827 cell adhesion molecule L1-like a [Source:ZFIN;Acc:ZDB-GENE-090313-201]
60. r3hdm1 ENSDARG00000101458 5241 1.547 - - - - - 0.755 - 0.792 - R3H domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7119]
61. memo1 ENSDARG00000010823 1681 1.545 0.711 0.834 - - - - - - - mediator of cell motility 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5571]
62. PPP1R8 PPP1R8 1897 1.543 - 0.818 - - - 0.725 - - -
63. rtf1 ENSDARG00000008947 6596 1.536 - - - - - 0.742 - 0.794 - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
64. ptenb ENSDARG00000056623 5783 1.523 - - - - - 0.716 - - 0.807 phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
65. rgl1 ENSDARG00000005989, ENSDARG00000114367 2501 1.516 - 0.709 - - - 0.807 - - - ral guanine nucleotide dissociation stimulator-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1816]
66. tmem167b_1 ENSDARG00000059400 1453 1.512 0.746 0.766 - - - - - - - transmembrane protein 167B [Source:ZFIN;Acc:ZDB-GENE-040808-17]
67. nr2f6b ENSDARG00000003165 5855 1.498 - 0.794 - - - 0.704 - - - nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]
68. ptena ENSDARG00000071018, ENSDARG00000114986, ENSDARG00000115966 6610 1.496 0.781 - - - - 0.715 - - - phosphatase and tensin homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-3776]
69. oxct1a ENSDARG00000013063 1517 1.494 - 0.782 - - - 0.712 - - - 3-oxoacid CoA transferase 1a [Source:ZFIN;Acc:ZDB-GENE-040723-3]
70. sp3a ENSDARG00000001549 1994 1.488 0.754 0.734 - - - - - - - sp3a transcription factor [Source:ZFIN;Acc:ZDB-GENE-070410-111]
71. ctnna1 ENSDARG00000102441 7984 1.482 - 0.767 - - - 0.715 - - - catenin (cadherin-associated protein), alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991207-24]
72. arhgef4 ENSDARG00000012914 1464 1.48 - 0.725 - - - 0.755 - - - Rho guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-575]
73. prmt1 ENSDARG00000010246 11311 1.473 - 0.769 - - - - - - 0.704 protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
74. akap1b ENSDARG00000006062 4214 1.457 - 0.736 - - - 0.721 - - - A kinase (PRKA) anchor protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6844]
75. ck2a1 ck2a1 3749 1.453 - 0.710 - - - 0.743 - - -
76. si:ch211-79l20.4 1305 1.436 - 0.712 - - - 0.724 - - - si:ch211-79l20.4, transcript variant X3
77. pias4a ENSDARG00000007081 4264 1.433 - 0.708 - - - 0.725 - - - protein inhibitor of activated STAT, 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2734]
78. prpf8 ENSDARG00000026180 7026 1.425 - - - - - 0.703 - - 0.722 pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
79. arf6b ENSDARG00000052928 4585 0.999 - - - - - - 0.999 - - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
80. degs1 ENSDARG00000007347 2481 0.999 - - - - - - 0.999 - - delta(4)-desaturase, sphingolipid 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5283]
81. mapre1b ENSDARG00000002659 9119 0.999 - - - - - - 0.999 - - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
82. ctdsp1 ENSDARG00000040674 2828 0.999 - - - - - - 0.999 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-523]
83. prkag1 ENSDARG00000003818 2800 0.999 - - - - - - 0.999 - - protein kinase, AMP-activated, gamma 1 non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2188]
84. AP2A1 ENSDARG00000054320 5591 0.999 - - - - - - 0.999 - - adaptor related protein complex 2 subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090302-2]
85. SH3BGRL ENSDARG00000058302 4525 0.999 - - - - - - 0.999 - - SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
86. TNRC6C_1 TNRC6C_1 6574 0.999 - - - - - - 0.999 - -
87. xpo4 ENSDARG00000010281, ENSDARG00000109463 2010 0.998 - - - - - - 0.998 - - exportin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3062]
88. echdc2 ENSDARG00000016607 719 0.998 - - - - - - 0.998 - - enoyl CoA hydratase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030219-147]
89. irx3a ENSDARG00000101076 3106 0.998 - - - - - - 0.998 - - iroquois homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-991119-5]
90. prkacba ENSDARG00000001782 1340 0.998 - - - - - - 0.998 - - protein kinase, cAMP-dependent, catalytic, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1351]
91. dkk2 ENSDARG00000076420 553 0.998 - - - - - - 0.998 - - dickkopf WNT signaling pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-14]
92. cd276 ENSDARG00000003061 2798 0.998 - - - - - - 0.998 - - CD276 molecule [Source:ZFIN;Acc:ZDB-GENE-070112-452]
93. cux2b ENSDARG00000086345 519 0.998 - - - - - - 0.998 - - cut-like homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-081104-176]
94. mfhas1 ENSDARG00000079104, ENSDARG00000115162 921 0.998 - - - - - - 0.998 - - malignant fibrous histiocytoma amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-080917-20]
95. etv5a ENSDARG00000069763, ENSDARG00000112509, ENSDARG00000113729 1954 0.998 - - - - - - 0.998 - - ets variant 5a [Source:ZFIN;Acc:ZDB-GENE-030131-9572]
96. vipr2 ENSDARG00000012353, ENSDARG00000111580, ENSDARG00000115849 485 0.998 - - - - - - 0.998 - - vasoactive intestinal peptide receptor 2 [Source:ZFIN;Acc:ZDB-GENE-010406-4]
97. fbl ENSDARG00000053912 5891 0.998 - - - - - - 0.998 - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
98. kif5aa ENSDARG00000098936 2428 0.998 - - - - - - 0.998 - - kinesin family member 5A, a [Source:ZFIN;Acc:ZDB-GENE-070912-141]
99. mtmr14 ENSDARG00000059642 1405 0.998 - - - - - - 0.998 - - myotubularin related protein 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2649]
100. ARHGAP35 2409 0.998 - - - - - - 0.998 - - Rho GTPase activating protein 35b, transcript variant X2

There are 1052 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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