Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for slc6a8

Gene Name Gene ID Reads Annotation
slc6a8 ENSDARG00000043646 1114 solute carrier family 6 (neurotransmitter transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-071024-2]










Genes with expression patterns similar to slc6a8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. slc6a8 ENSDARG00000043646 1114 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 solute carrier family 6 (neurotransmitter transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-071024-2]
2. hccsa hccsa 869 3.036 0.717 - - 0.724 - 0.869 0.726 - -
3. sgcd ENSDARG00000098573 4980 2.649 0.790 0.957 - - - - 0.902 - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
4. bves ENSDARG00000058548 2291 2.553 0.771 0.992 - - - 0.790 - - - blood vessel epicardial substance [Source:ZFIN;Acc:ZDB-GENE-040624-11]
5. flncb ENSDARG00000018820 5595 2.519 0.701 0.918 - - - - 0.900 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
6. bin1 bin1 3199 2.476 0.750 0.944 - - - - 0.782 - -
7. si:ch211-156j16.1 ENSDARG00000092035 7441 2.433 0.828 - 0.735 - - - 0.870 - - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
8. CR354540.2 ENSDARG00000117517 18452 2.43 0.785 - 0.728 - - - 0.917 - -
9. trdn ENSDARG00000041779 4283 2.411 0.807 - 0.736 - - - 0.868 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
10. usp2a ENSDARG00000020107 2586 2.411 0.784 - - 0.832 - - 0.795 - - ubiquitin specific peptidase 2a [Source:ZFIN;Acc:ZDB-GENE-041212-59]
11. tgm2a ENSDARG00000070157 4516 2.409 0.735 - 0.794 - - - 0.880 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
12. MYOM3 2720 2.379 0.788 - 0.730 - - - 0.861 - - myomesin 3, transcript variant X2
13. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 2.363 0.749 - 0.752 - - - 0.862 - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
14. MYOM1 MYOM1 3870 2.358 0.706 - 0.761 - - - 0.891 - -
15. PTGES3L PTGES3L 4801 2.355 0.778 0.716 - - - - 0.861 - -
16. SPEG SPEG 4017 2.353 0.728 - 0.807 - - - 0.818 - -
17. mdh1b ENSDARG00000018008 3196 2.336 0.720 - 0.723 - - - 0.893 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
18. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 2.332 0.795 - - - 0.703 - 0.834 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
19. rbm24b ENSDARG00000031809, ENSDARG00000110167 2404 2.327 0.788 - - - - 0.809 0.730 - - RNA binding motif protein 24b [Source:ZFIN;Acc:ZDB-GENE-060312-43]
20. ryr1b ENSDARG00000023797 5693 2.326 - - 0.716 - - - 0.898 0.712 - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
21. txlnbb ENSDARG00000076241 6396 2.317 0.813 - 0.703 - - - 0.801 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
22. casq1b ENSDARG00000018105 2643 2.312 0.710 - 0.738 - - - 0.864 - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
23. pabpc4 ENSDARG00000059259, ENSDARG00000111312 2392 2.308 0.708 0.853 - - - - 0.747 - - poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]
24. tnnt3a ENSDARG00000030270 112506 2.29 0.781 - 0.779 - - - 0.730 - - troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
25. tpma ENSDARG00000033683 752432 2.29 0.799 - 0.733 - - - 0.758 - - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
26. stac3 ENSDARG00000098883 1765 2.284 - - 0.725 0.739 - - 0.820 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
27. C12H10orf71 C12H10orf71 595 2.24 0.734 - 0.729 - - - 0.777 - -
28. smyd2a ENSDARG00000055151 2505 2.222 - - - - 0.754 0.713 0.755 - - SET and MYND domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050320-126]
29. atp2a1 ENSDARG00000020574 291561 2.195 0.744 - 0.740 - - - 0.711 - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
30. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 1.933 - 0.985 - - - - 0.948 - - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
31. trim63 trim63 2437 1.87 - 0.987 - - - - 0.883 - -
32. tmx2a ENSDARG00000079122, ENSDARG00000109756 1156 1.852 - 0.985 - - - - 0.867 - - thioredoxin-related transmembrane protein 2a [Source:ZFIN;Acc:ZDB-GENE-050208-95]
33. COMP 2018 1.803 - 0.984 - - - - 0.819 - - cartilage oligomeric matrix protein, transcript variant X1
34. cxcl12a ENSDARG00000037116 5433 1.797 - 0.985 - - - - 0.812 - - chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030318-1]
35. usp28 ENSDARG00000008880 1850 1.775 0.840 - - - - - 0.935 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
36. tgfb3 ENSDARG00000019367 2327 1.77 - 0.986 - - - - 0.784 - - transforming growth factor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-030723-4]
37. klhl41b ENSDARG00000006757 10762 1.765 0.888 - - - - - 0.877 - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
38. zgc:153662 zgc:153662 4604 1.752 0.825 - - - - - 0.927 - -
39. ndufa12 ENSDARG00000042469, ENSDARG00000116793 3843 1.743 - 0.950 - - - - 0.793 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:ZFIN;Acc:ZDB-GENE-050828-1]
40. adss ENSDARG00000002071 5497 1.712 - - 0.821 - - - 0.891 - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
41. hapln1a ENSDARG00000089769 12334 1.711 0.835 - - - - - 0.876 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
42. sptb ENSDARG00000030490 7128 1.709 0.809 - - - - - 0.900 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
43. BX294434.1 ENSDARG00000061272 6493 1.708 0.808 - - - - - 0.900 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
44. CU633479.5 ENSDARG00000114818 1815 1.707 0.787 - - - - - 0.920 - -
45. murcb murcb 13655 1.701 0.799 - - - - - 0.902 - -
46. TMPO TMPO 3264 1.699 0.785 - - - - - 0.914 - -
47. C13H10orf71 3489 1.695 0.821 - - - - - 0.874 - - chromosome 13 C10orf71 homolog
48. kcnma1a ENSDARG00000079840 2584 1.684 0.862 - - - - - 0.822 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
49. cdv3 ENSDARG00000023028 12380 1.682 - 0.980 - - - - 0.702 - - carnitine deficiency-associated gene expressed in ventricle 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6034]
50. rpl7l1 ENSDARG00000042864 3256 1.679 0.705 0.974 - - - - - - - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
51. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.678 0.775 - - - - - 0.903 - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
52. cmc2 ENSDARG00000043635 591 1.675 - - - - - 0.829 0.846 - - C-x(9)-C motif containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-409]
53. smtnl1 ENSDARG00000041257 7410 1.669 0.751 - - - - - 0.918 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
54. EHBP1L1 EHBP1L1 2500 1.669 0.774 - - - - - 0.895 - -
55. COL22A1 COL22A1 4473 1.668 0.784 - - - - - 0.884 - -
56. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.668 - 0.953 - - - - 0.715 - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
57. rtn2a ENSDARG00000016088 12184 1.663 0.799 - - - - - 0.864 - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
58. pbxip1a ENSDARG00000071015 4960 1.662 0.794 - - - - - 0.868 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
59. efemp2a ENSDARG00000094324 39261 1.66 0.760 - - - - - 0.900 - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
60. fitm1 ENSDARG00000056464 1759 1.659 0.749 - - - - - 0.910 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
61. myod1 ENSDARG00000030110 6019 1.657 0.790 - - - - - 0.867 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
62. cacng1 cacng1 3118 1.654 0.807 - - - - - 0.847 - -
63. myhz2 ENSDARG00000012944 69921 1.65 0.770 - - - - - 0.880 - - myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
64. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 1.648 0.805 - - - - - 0.843 - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
65. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.645 0.733 - - - - - 0.912 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
66. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 1.641 - - 0.756 - - - 0.885 - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
67. nexn ENSDARG00000057317 10972 1.641 0.776 - - - - - 0.865 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
68. tbx15 ENSDARG00000002582 755 1.638 0.789 - - - - - 0.849 - - T-box 15 [Source:ZFIN;Acc:ZDB-GENE-020529-1]
69. ryr3 ENSDARG00000071331 6795 1.634 0.719 - - - - - 0.915 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
70. cct3 ENSDARG00000016173 15869 1.634 - 0.826 - - - - 0.808 - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
71. GAB3 GAB3 72 1.631 - - - 0.809 - 0.822 - - -
72. mafa ENSDARG00000015890 2140 1.628 0.797 - - - - - 0.831 - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]
73. clic5a ENSDARG00000075993, ENSDARG00000115073 607 1.627 - - - 0.796 - - 0.831 - - chloride intracellular channel 5a [Source:ZFIN;Acc:ZDB-GENE-041114-84]
74. zgc:92518 ENSDARG00000016343 3837 1.625 - - 0.741 - - - 0.884 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
75. gars ENSDARG00000059070 17015 1.623 - 0.893 - - - - 0.730 - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
76. pvalb4 ENSDARG00000024433 35736 1.622 0.748 - - - - - 0.874 - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
77. prx ENSDARG00000017246 6183 1.621 0.726 - - - - - 0.895 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
78. pvalb7 ENSDARG00000034705, ENSDARG00000109277 221 1.62 - - - - - 0.912 0.708 - - parvalbumin 7 [Source:ZFIN;Acc:ZDB-GENE-040718-285]
79. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 1.619 0.724 - - - - - 0.895 - - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
80. sh3bgr ENSDARG00000021633 3498 1.617 0.755 - - - - - 0.862 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
81. tnnt2d ENSDARG00000002988 7590 1.617 - - 0.715 - - - 0.902 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
82. sspn ENSDARG00000041747, ENSDARG00000114109, ENSDARG00000114643 1228 1.609 - - - 0.794 - - 0.815 - - sarcospan (Kras oncogene-associated gene) [Source:ZFIN;Acc:ZDB-GENE-051127-43]
83. pygma ENSDARG00000055518 15972 1.608 0.753 - - - - - 0.855 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
84. asb2b ENSDARG00000102490 311 1.607 - - - 0.765 - 0.842 - - - ankyrin repeat and SOCS box containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-20]
85. ntmt1 ENSDARG00000022399 5779 1.607 0.750 - - - - - 0.857 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
86. gypc ENSDARG00000041546 1487 1.607 0.814 - - - - - 0.793 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
87. mybpc2b ENSDARG00000021265 9618 1.605 0.778 - - - - - 0.827 - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
88. DBNDD2 DBNDD2 216 1.601 0.800 - - 0.801 - - - - -
89. tgm1l1 ENSDARG00000102106 1437 1.601 0.777 - - - - - 0.824 - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
90. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 1.601 - - 0.729 - - - 0.872 - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
91. tnnc1b ENSDARG00000037539 13945 1.6 - - 0.720 - - - 0.880 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
92. BX530018.3 ENSDARG00000107022 614 1.6 - - - - - 0.802 0.798 - -
93. synpo2lb ENSDARG00000078696 2361 1.599 0.716 - - - - - 0.883 - - synaptopodin 2-like b [Source:ZFIN;Acc:ZDB-GENE-090828-5]
94. srl ENSDARG00000104587 11126 1.599 0.736 - - - - - 0.863 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
95. jph2 ENSDARG00000028625 6706 1.597 0.705 - - - - - 0.892 - - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
96. CU468924.1 CU468924.1 544 1.593 0.795 - - 0.798 - - - - -
97. cap2 ENSDARG00000104478 3266 1.592 0.786 - - - - - 0.806 - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
98. hspb9 ENSDARG00000078674 2755 1.592 - - - - - 0.856 0.736 - - heat shock protein, alpha-crystallin-related, 9 [Source:ZFIN;Acc:ZDB-GENE-080214-6]
99. xirp2a ENSDARG00000071113 7113 1.591 0.759 - - - - - 0.832 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
100. dlk2 ENSDARG00000076247 387 1.59 - - - - - 0.762 0.828 - - delta-like 2 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-081107-4]

There are 1293 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA