Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for six7

Gene Name Gene ID Reads Annotation
six7 ENSDARG00000070107 140 SIX homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-990825-28]










Genes with expression patterns similar to six7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. six7 ENSDARG00000070107 140 6 - - 1.000 1.000 1.000 1.000 - 1.000 1.000 SIX homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-990825-28]
2. crx ENSDARG00000011989, ENSDARG00000113850 330 1.885 - - - - - - - 0.970 0.915 cone-rod homeobox [Source:ZFIN;Acc:ZDB-GENE-010403-1]
3. arhgap23b ENSDARG00000026840 6 1.879 - - - 0.879 - 1.000 - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
4. CU468142.1 CU468142.1 6 1.879 - - - 0.879 - 1.000 - - -
5. si:ch211-105d18.7 si:ch211-105d18.7 6 1.879 - - - 0.879 - 1.000 - - -
6. ahr1b ENSDARG00000023537 44 1.877 - - - - - 1.000 - 0.877 - aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
7. usp49 ENSDARG00000000229 706 1.76 - - - - - 0.838 - - 0.922 ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
8. pou3f3b ENSDARG00000095896 3 1.751 - - 0.892 - - - - 0.859 - POU class 3 homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-980526-140]
9. pax6l pax6l 54 1.738 - - 0.845 - - - - 0.893 -
10. sst3 61 1.734 - - - - - 0.862 - 0.872 - somatostatin 3
11. ADAMTS15 ADAMTS15 73 1.73 - - 0.730 - - 1.000 - - -
12. crygm2d7 ENSDARG00000076572, ENSDARG00000116634 229 1.72 - - - - - - - 0.811 0.909 crystallin, gamma M2d7 [Source:ZFIN;Acc:ZDB-GENE-060918-5]
13. ENKD1 ENSDARG00000043550 44 1.706 - - - - - 1.000 - 0.706 - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
14. tet1 ENSDARG00000075230, ENSDARG00000110764 8 1.698 - - 0.858 - 0.840 - - - - tet methylcytosine dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-090312-88]
15. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1.684 - - 0.781 - - - - 0.903 - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
16. vax2 ENSDARG00000058702 175 1.676 - - - 0.815 - - - 0.861 - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
17. DHX32 DHX32 181 1.675 - - - - - 0.878 - 0.797 -
18. si:ch211-212n6.18 si:ch211-212n6.18 233 1.662 - - 0.798 - - - - 0.864 -
19. C2CD4C_1 C2CD4C_1 24 1.659 - - 0.815 - - - - 0.844 -
20. KCNK3 KCNK3 115 1.625 - - 0.788 - - 0.837 - - -
21. crygm2d5 ENSDARG00000069792 207 1.601 - - - - - - - 0.897 0.704 crystallin, gamma M2d5 [Source:ZFIN;Acc:ZDB-GENE-060918-4]
22. SERINC4 ENSDARG00000044815 45 1.581 - - - - - 0.749 - 0.832 - serine incorporator 4 [Source:ZFIN;Acc:ZDB-GENE-121031-1]
23. med8 ENSDARG00000114425 7 1.559 - - - - 0.858 - - 0.701 - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
24. sox12 ENSDARG00000025847 681 1.51 - - - - - 0.712 - - 0.798 SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
25. CR391967.1 CR391967.1 135 1.486 - - - 0.728 - - - 0.758 -
26. si:dkey-19f21.8 si:dkey-19f21.8 12 1.473 - - 0.709 - - 0.764 - - -
27. lin7b ENSDARG00000037932 150 1.458 - - - - - 0.728 - 0.730 - lin-7 homolog B (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-1]
28. pcdh1g9 ENSDARG00000057519 6 1.403 - - 0.702 - - - - 0.701 - protocadherin 1 gamma 9 [Source:ZFIN;Acc:ZDB-GENE-050609-5]
29. pcdh15b ENSDARG00000008127 2 1 - - - - - 1.000 - - - protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1]
30. aqp1a.2 ENSDARG00000091027 6 1 - - - - - 1.000 - - - aquaporin 1a (Colton blood group), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-100409-1]
31. zgc:113516 20 1 - - - - - 1.000 - - - zgc:113516
32. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 1 - - - - - 1.000 - - - v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
33. BX640518.1 BX640518.1 24 1 - - - - - 1.000 - - -
34. FDFT1 ENSDARG00000101062 6 1 - - - - - 1.000 - - - farnesyl-diphosphate farnesyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-081104-242]
35. ush2a ENSDARG00000029482 10 1 - - - - - 1.000 - - - Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]
36. rpz3 ENSDARG00000069728 11 1 - - - - - 1.000 - - - rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
37. LRRK1_1 LRRK1_1 11 1 - - - - - 1.000 - - -
38. bbs5 ENSDARG00000039827 211 1 - - - - - 1.000 - - - Bardet-Biedl syndrome 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1083]
39. si:ch211-113a14.24 ENSDARG00000051718 183 1 - - - - - 1.000 - - - si:ch211-113a14.24 [Source:ZFIN;Acc:ZDB-GENE-121214-122]
40. PHKA1 PHKA1 10 1 - - - - - 1.000 - - -
41. si:ch211-59m15.2 si:ch211-59m15.2 3 1 - - - - - 1.000 - - -
42. HSPA8 ENSDARG00000068992, ENSDARG00000114726 120 1 - - - - - 1.000 - - - heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
43. wdr65 wdr65 251 1 - - - - - 1.000 - - -
44. CABZ01069081.1 CABZ01069081.1 16 1 - - - - - 1.000 - - -
45. CABZ01087111.1 CABZ01087111.1 42 1 - - - - - 1.000 - - -
46. mctp1b ENSDARG00000060871 20 1 - - - - - 1.000 - - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
47. si:dkey-248g17.3 si:dkey-248g17.3 34 1 - - - - - 1.000 - - -
48. CU633848.1 CU633848.1 4 1 - - - - - 1.000 - - -
49. CABZ01049059.1 CABZ01049059.1 0 1 - - - - - 1.000 - - -
50. antxr1d ENSDARG00000060845 10 1 - - - - - 1.000 - - - ANTXR cell adhesion molecule 1d [Source:ZFIN;Acc:ZDB-GENE-090313-28]
51. cngb3 cngb3 12 1 - - - - - 1.000 - - -
52. FAM78A FAM78A 61 1 - - - - - 1.000 - - -
53. nphp1 ENSDARG00000009046, ENSDARG00000113790 104 1 - - - - - 1.000 - - - nephronophthisis 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1234]
54. SNORA23 SNORA23 1 1 - - - - - 1.000 - - -
55. hif1al2 ENSDARG00000044550 140 1 - - - - - 1.000 - - - hypoxia inducible factor 1 subunit alpha, like 2 [Source:ZFIN;Acc:ZDB-GENE-050211-2]
56. CABZ01113374.2 CABZ01113374.2 27 1 - - - - - 1.000 - - -
57. cul4a ENSDARG00000096578 14 1 - - - - - 1.000 - - - cullin 4A [Source:ZFIN;Acc:ZDB-GENE-040426-1357]
58. DIP2B DIP2B 18 1 - - - - - 1.000 - - -
59. serpine3 ENSDARG00000057108 49 1 - - - - - 1.000 - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
60. TMEM240 TMEM240 13 1 - - - - - 1.000 - - -
61. pgap2 ENSDARG00000044596 60 1 - - - - - 1.000 - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
62. GBGT1_1 GBGT1_1 19 1 - - - - - 1.000 - - -
63. rnaset2l ENSDARG00000058413 17 1 - - - - - 1.000 - - - ribonuclease T2, like [Source:ZFIN;Acc:ZDB-GENE-090819-2]
64. PCDH10 PCDH10 7 1 - - - - - 1.000 - - -
65. hid1b ENSDARG00000100583 35 1 - - - - - 1.000 - - - HID1 domain containing b [Source:ZFIN;Acc:ZDB-GENE-040718-239]
66. PPAPDC3 PPAPDC3 14 1 - - - - - 1.000 - - -
67. bdkrb1 ENSDARG00000020744 4 1 - - - - - 1.000 - - - bradykinin receptor B1 [Source:ZFIN;Acc:ZDB-GENE-030814-1]
68. or112-1 ENSDARG00000077211 2 1 - - - - - 1.000 - - - odorant receptor, family A, subfamily 112, member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-195]
69. si:ch211-10j20.4 si:ch211-10j20.4 0 1 - - - - - 1.000 - - -
70. si:dkey-40n15.1 ENSDARG00000116117 1 1 - - - - - 1.000 - - - si:dkey-40n15.1 [Source:ZFIN;Acc:ZDB-GENE-110914-64]
71. si:ch73-36i7.2 si:ch73-36i7.2 5 1 - - - - - 1.000 - - -
72. mir124-6 64 1 - - - - - 1.000 - - - microRNA 124-6
73. CIT_1 CIT_1 6 1 - - - - - 1.000 - - -
74. LRRC71 LRRC71 11 1 - - - - - 1.000 - - -
75. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 1 - - - - - 1.000 - - - si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
76. fbxo36a ENSDARG00000010662, ENSDARG00000109843 13 1 - - - 1.000 - - - - - F-box protein 36a [Source:ZFIN;Acc:ZDB-GENE-060929-986]
77. si:ch1073-219n12.1 71 1 - - - - - 1.000 - - - si:ch1073-219n12.1, transcript variant X1
78. rx3 ENSDARG00000052893 43 1 - - - - - 1.000 - - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
79. si:ch211-196c10.5 si:ch211-196c10.5 3 1 - - - - - 1.000 - - -
80. si:ch211-113a14.19_4 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 18 1 - - - - - 1.000 - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
81. si:dkey-256e21.1 si:dkey-256e21.1 11 1 - - - 1.000 - - - - -
82. si:ch211-268b13.6 si:ch211-268b13.6 0 1 - - - - - 1.000 - - -
83. emc4 ENSDARG00000039268 553 1 - - - - - 1.000 - - - ER membrane protein complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1891]
84. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1 - - - - - 1.000 - - - chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
85. snf8 ENSDARG00000058076 384 1 - - - - - 1.000 - - - SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-117]
86. RBM20 74 1 - - - - - 1.000 - - - RNA binding motif protein 20, transcript variant X1
87. CABZ01031627.2 CABZ01031627.2 1 1 - - - - - 1.000 - - -
88. si:ch211-3o3.8 si:ch211-3o3.8 2 1 - - - - - 1.000 - - -
89. foxb1a ENSDARG00000089042 101 1 - - - - - 1.000 - - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
90. CU929159.1 CU929159.1 0 1 - - - - - 1.000 - - -
91. si:ch211-71k24.5 si:ch211-71k24.5 9 1 - - - - - 1.000 - - -
92. CR792453.3 ENSDARG00000110328 5 1 - - - - - 1.000 - - - uncharacterized LOC110438862 [Source:NCBI gene;Acc:110438862]
93. CABZ01015475.1 ENSDARG00000104841 6 1 - - - - - 1.000 - - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
94. HEPACAM ENSDARG00000112032 1 1 - - - - - 1.000 - - - hepatic and glial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:26361]
95. CPEB4_1 CPEB4_1 1 1 - - - 1.000 - - - - -
96. CR356223.4 CR356223.4 42 1 - - - - - 1.000 - - -
97. si:ch211-241b2.4 ENSDARG00000100686 19 1 - - - - - 1.000 - - - si:ch211-241b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-191]
98. si:dkey-111e8.2 si:dkey-111e8.2 0 1 - - - - - 1.000 - - -
99. CABZ01053617.1 CABZ01053617.1 5 1 - - - - - 1.000 - - -
100. CT573234.2 CT573234.2 1 1 - - - - - 1.000 - - -

There are 1257 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA