Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sim1b

Gene Name Gene ID Reads Annotation
sim1b ENSDARG00000013789 47 SIM bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041210-5]










Genes with expression patterns similar to sim1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sim1b ENSDARG00000013789 47 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SIM bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041210-5]
2. syk ENSDARG00000008186 24 2.388 - - - - 0.713 0.725 0.950 - - spleen tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-040702-3]
3. rhcgl1 ENSDARG00000007080, ENSDARG00000111618 28 1.836 - - - - - 0.836 1.000 - - Rh family, C glycoprotein, like 1 [Source:ZFIN;Acc:ZDB-GENE-060209-2]
4. CU469532.1 CU469532.1 31 1.836 - - - - - 0.836 1.000 - -
5. arid5a ENSDARG00000077120 26 1.669 - - - - - 0.888 0.781 - - AT rich interactive domain 5A (MRF1-like) [Source:ZFIN;Acc:ZDB-GENE-100525-3]
6. CU929052.1 CU929052.1 642 1.553 - - 0.717 - - 0.836 - - -
7. ZNF512B ENSDARG00000071055 7 1.549 - - - - 0.713 0.836 - - - zinc finger protein 512B [Source:HGNC Symbol;Acc:HGNC:29212]
8. grifin ENSDARG00000033382 141 1.54 - - 0.704 - - 0.836 - - - galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
9. lgals3bpb ENSDARG00000040528 32 1.511 - - - - 0.713 - 0.798 - - lectin, galactoside-binding, soluble, 3 binding protein b [Source:ZFIN;Acc:ZDB-GENE-040426-2262]
10. lctla ENSDARG00000036139, ENSDARG00000116316 32 1.462 - - - 0.738 - - - 0.724 - lactase-like a [Source:ZFIN;Acc:ZDB-GENE-040718-233]
11. CABZ01080434.1 ENSDARG00000102438 4 1 - - - - - - 1.000 - -
12. fmn1 ENSDARG00000011975 5 1 - - - - - - 1.000 - - formin 1 [Source:ZFIN;Acc:ZDB-GENE-041001-198]
13. foxi1 ENSDARG00000104566 176 1 - - - - - - 1.000 - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
14. hyal3 ENSDARG00000036818 23 1 - - - - - - 1.000 - - hyaluronoglucosaminidase 3 [Source:ZFIN;Acc:ZDB-GENE-081104-366]
15. CR942805.1 CR942805.1 94 1 - - - - - - 1.000 - -
16. ifit5 ifit5 12 1 - - - - - - 1.000 - -
17. TRIM14_3 TRIM14_3 7 1 - - - - - - 1.000 - -
18. CABZ01030033.1 ENSDARG00000117613 3 1 - - - - - - 1.000 - -
19. TRIM35_3 TRIM35_3 172 1 - - - - - - 1.000 - -
20. si:ch211-120e1.7 ENSDARG00000094634 14 1 - - - - - - 1.000 - - si:ch211-120e1.7 [Source:ZFIN;Acc:ZDB-GENE-070424-119]
21. TNS3_1 TNS3_1 8 1 - - - - - - 1.000 - -
22. si:ch211-238g23.1 ENSDARG00000055746 23 1 - - - - - - 1.000 - - si:ch211-238g23.1 [Source:ZFIN;Acc:ZDB-GENE-050420-173]
23. wdr4 ENSDARG00000090581 42 1 - - - - - - 1.000 - - WD repeat domain 4 [Source:ZFIN;Acc:ZDB-GENE-060810-10]
24. ENSDARG00000074422 ENSDARG00000074422 61 1 - - - - - - 1.000 - -
25. wu:fi26e04 wu:fi26e04 15 1 - - - - - - 1.000 - -
26. HTRA2_6 HTRA2_6 0 1 - - - - - - 1.000 - -
27. b3galtlb b3galtlb 27 1 - - - - - - 1.000 - -
28. acta2 ENSDARG00000045180 96 1 - - - - - - 1.000 - - actin, alpha 2, smooth muscle, aorta [Source:ZFIN;Acc:ZDB-GENE-030131-1229]
29. il1b ENSDARG00000098700 27 1 - - - - - - 1.000 - - interleukin 1, beta [Source:ZFIN;Acc:ZDB-GENE-040702-2]
30. BX682234.3 BX682234.3 7 1 - - - - - - 1.000 - -
31. si:ch211-163f10.4 si:ch211-163f10.4 1 1 - - - - - - 1.000 - -
32. RAB3IL1 ENSDARG00000007711 11 1 - - - - - - 1.000 - - RAB3A interacting protein (rabin3)-like 1 [Source:ZFIN;Acc:ZDB-GENE-110921-5]
33. SNORA81 SNORA81 47 1 - - - - - - 1.000 - -
34. si:ch211-140o17.1 si:ch211-140o17.1 0 1 - - - - - - 1.000 - -
35. cthrc1b ENSDARG00000001971 44 1 - - - - - - 1.000 - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
36. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1 - - - - - - 1.000 - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
37. VWDE_1 VWDE_1 2 1 - - - - - - 1.000 - -
38. si:dkey-94f20.4 ENSDARG00000016923 2 1 - - - - - - 1.000 - - si:dkey-94f20.4 [Source:ZFIN;Acc:ZDB-GENE-121214-276]
39. CABZ01090975.1 CABZ01090975.1 9 1 - - - - - - 1.000 - -
40. spo11 ENSDARG00000013837 7 1 - - - - - - 1.000 - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
41. ncf2 ENSDARG00000005821 28 1 - - - - - - 1.000 - - neutrophil cytosolic factor 2 [Source:ZFIN;Acc:ZDB-GENE-070209-29]
42. camk1ga ENSDARG00000044526 5 1 - - - - - - 1.000 - - calcium/calmodulin-dependent protein kinase IGa [Source:ZFIN;Acc:ZDB-GENE-030131-7594]
43. hbaa2 ENSDARG00000069735 10 1 - - - - - - 1.000 - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
44. U4atac U4atac 47 1 - - - - - - 1.000 - -
45. DIP2B DIP2B 18 1 - - - - - - 1.000 - -
46. si:dkey-102f14.7 ENSDARG00000092255 1 1 - - - - - - 1.000 - - si:dkey-102f14.7 [Source:ZFIN;Acc:ZDB-GENE-060503-895]
47. CABZ01066695.1 CABZ01066695.1 12 1 - - - - - - 1.000 - -
48. si:dkey-24p1.6 ENSDARG00000028784, ENSDARG00000097212 23 1 - - - - - - 1.000 - - si:dkey-24p1.6 [Source:ZFIN;Acc:ZDB-GENE-060503-67]
49. lipt2 ENSDARG00000069852 14 1 - - - - - - 1.000 - - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
50. TRHDE TRHDE 1 1 - - - - - - 1.000 - -
51. SLC25A22_1 SLC25A22_1 3 1 - - - - - - 1.000 - -
52. rrad ENSDARG00000052011, ENSDARG00000112434 70 1 - - - - - - 1.000 - - Ras-related associated with diabetes [Source:ZFIN;Acc:ZDB-GENE-030131-5607]
53. ENSDARG00000077328 ENSDARG00000077328 1 1 - - - - - - 1.000 - -
54. CABZ01048549.1 CABZ01048549.1 1 1 - - - - - - 1.000 - -
55. ripply2 ENSDARG00000070535 18 1 - - - - - - 1.000 - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
56. ENSDARG00000091099 ENSDARG00000091099 5 1 - - - - - - 1.000 - -
57. fam219b ENSDARG00000104637 3 1 - - - - - - 1.000 - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
58. GPR78 GPR78 17 1 - - - - - - 1.000 - -
59. CABZ01073112.1 CABZ01073112.1 40 1 - - - - - - 1.000 - -
60. lhx6 ENSDARG00000006896, ENSDARG00000112520 98 1 - - - - - - 1.000 - - LIM homeobox 6 [Source:ZFIN;Acc:ZDB-GENE-041025-1]
61. si:dkey-28d5.13 ENSDARG00000077260 3 1 - - - - - - 1.000 - - si:dkey-28d5.13 [Source:ZFIN;Acc:ZDB-GENE-060503-636]
62. MYO1G ENSDARG00000036104 1 1 - - - - - - 1.000 - - myosin IG [Source:HGNC Symbol;Acc:HGNC:13880]
63. psmd2 ENSDARG00000103190 141 1 - - - - - - 1.000 - - proteasome 26S subunit, non-ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1480]
64. purg ENSDARG00000099187, ENSDARG00000114450 33 1 - - - - - - 1.000 - - purine-rich element binding protein G [Source:ZFIN;Acc:ZDB-GENE-070702-3]
65. mir10b-2 116 1 - - - - - - 1.000 - - microRNA 10b-2
66. CR457462.1 CR457462.1 11 1 - - - - - - 1.000 - -
67. zgc:66455 ENSDARG00000052375 3 1 - - - - - - 1.000 - - zgc:66455 [Source:ZFIN;Acc:ZDB-GENE-040426-1642]
68. arr3a ENSDARG00000056511, ENSDARG00000114648 192 1 - - - - - - 1.000 - - arrestin 3a, retinal (X-arrestin) [Source:ZFIN;Acc:ZDB-GENE-040718-102]
69. SNORA81_1 SNORA81_1 8 1 - - - - - - 1.000 - -
70. CU861664.1 CU861664.1 53 1 - - - - - - 1.000 - -
71. RAPGEF4 ENSDARG00000079872 82 1 - - - - - - 1.000 - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
72. C24H8orf34 C24H8orf34 1 1 - - - - - - 1.000 - -
73. zgc:153846 ENSDARG00000040738 1 1 - - - - - - 1.000 - - zgc:153846 [Source:ZFIN;Acc:ZDB-GENE-060929-898]
74. GALNT8_1 GALNT8_1 10 1 - - - - - - 1.000 - -
75. PEG3_17 PEG3_17 15 1 - - - - - - 1.000 - -
76. map2k4a ENSDARG00000063583 38 1 - - - - - - 1.000 - - mitogen-activated protein kinase kinase 4a [Source:ZFIN;Acc:ZDB-GENE-060512-98]
77. slc18b1 ENSDARG00000044047 7 1 - - - - - - 1.000 - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
78. moxd1l ENSDARG00000069296, ENSDARG00000115126 2 1 - - - - - - 1.000 - - monooxygenase, DBH-like 1, like [Source:ZFIN;Acc:ZDB-GENE-060126-3]
79. NPFFR1 ENSDARG00000111997 29 1 - - - - - - 1.000 - - neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
80. si:dkey-148b12.4 si:dkey-148b12.4 2 1 - - - - - - 1.000 - -
81. si:dkeyp-4f2.3 ENSDARG00000096011, ENSDARG00000104584 5 1 - - - - - - 1.000 - - si:dkeyp-4f2.3 [Source:ZFIN;Acc:ZDB-GENE-110914-117]
82. dgkza ENSDARG00000014439 82 1 - - - - - - 1.000 - - diacylglycerol kinase, zeta a [Source:ZFIN;Acc:ZDB-GENE-111104-3]
83. zgc:172053 ENSDARG00000038321 9 1 - - - - - - 1.000 - - zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25]
84. BX682234.1 ENSDARG00000074732 5 1 - - - - - - 1.000 - - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
85. SNORA63 SNORA63 7 1 - - - - - - 1.000 - -
86. si:ch211-113a14.15_1 2 1 - - - - - - 1.000 - - si:ch211-113a14.15
87. sox17 ENSDARG00000101717 11 1 - - - - - - 1.000 - - SRY (sex determining region Y)-box 17 [Source:ZFIN;Acc:ZDB-GENE-991213-1]
88. adam8a ENSDARG00000001452 316 0.965 - - - - - - 0.965 - - ADAM metallopeptidase domain 8a [Source:ZFIN;Acc:ZDB-GENE-030616-622]
89. znf687b ENSDARG00000019299 71 0.95 - - - - - - 0.950 - - zinc finger protein 687b [Source:ZFIN;Acc:ZDB-GENE-041111-214]
90. arhgef3l ENSDARG00000037554 23 0.943 - - - - - - 0.943 - - Rho guanine nucleotide exchange factor (GEF) 3, like [Source:ZFIN;Acc:ZDB-GENE-050522-85]
91. CD200_2 CD200_2 47 0.943 - - - - - - 0.943 - -
92. si:ch211-225p5.3 si:ch211-225p5.3 10 0.943 - - - - - - 0.943 - -
93. fabp6 ENSDARG00000044566 46 0.943 - - - - - - 0.943 - - fatty acid binding protein 6, ileal (gastrotropin) [Source:ZFIN;Acc:ZDB-GENE-040625-49]
94. PEBP4 ENSDARG00000107065 4 0.935 - - - - - - 0.935 - - phosphatidylethanolamine binding protein 4 [Source:HGNC Symbol;Acc:HGNC:28319]
95. dusp14 ENSDARG00000057625, ENSDARG00000111613 68 0.928 - - - - - - 0.928 - - dual specificity phosphatase 14 [Source:ZFIN;Acc:ZDB-GENE-041010-162]
96. RAB1B RAB1B 20 0.928 - - - - - - 0.928 - -
97. allc ENSDARG00000042562 12 0.924 - - - - - 0.924 - - - allantoicase [Source:ZFIN;Acc:ZDB-GENE-040718-471]
98. EMB ENSDARG00000059485 35 0.924 - - - - - 0.924 - - - embigin [Source:ZFIN;Acc:ZDB-GENE-070705-158]
99. tmprss4b ENSDARG00000012860 6 0.924 - - - - - 0.924 - - - transmembrane serine protease 4b [Source:ZFIN;Acc:ZDB-GENE-030131-5862]
100. SFT2D2_1 SFT2D2_1 219 0.92 - - - - 0.920 - - - -

There are 425 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA