Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sigirr

Gene Name Gene ID Reads Annotation
sigirr ENSDARG00000062204 52 single immunoglobulin and toll-interleukin 1 receptor (TIR) domain [Source:ZFIN;Acc:ZDB-GENE-080303-3]










Genes with expression patterns similar to sigirr

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sigirr ENSDARG00000062204 52 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 single immunoglobulin and toll-interleukin 1 receptor (TIR) domain [Source:ZFIN;Acc:ZDB-GENE-080303-3]
2. prr15lb ENSDARG00000029308, ENSDARG00000110636 25 2.251 - 0.789 - - - 0.719 0.743 - - proline rich 15-like b [Source:ZFIN;Acc:ZDB-GENE-050417-201]
3. zgc:163121 ENSDARG00000055370 110 1.685 - - 0.845 - - - 0.840 - - zgc:163121 [Source:ZFIN;Acc:ZDB-GENE-070424-80]
4. ngfrb ENSDARG00000089223, ENSDARG00000115390 41 1.653 - 0.723 0.930 - - - - - - nerve growth factor receptor b [Source:ZFIN;Acc:ZDB-GENE-070606-2]
5. zgc:174700 zgc:174700 35 1.622 - 0.775 - - - - 0.847 - -
6. si:dkeyp-53d3.6 204 1.618 - - 0.831 - - - 0.787 - - si:dkeyp-53d3.6, transcript variant X1
7. lrp1bb ENSDARG00000061517 172 1.617 - 0.702 0.915 - - - - - - low density lipoprotein receptor-related protein 1Bb [Source:ZFIN;Acc:ZDB-GENE-070912-401]
8. TRIM14_7 TRIM14_7 381 1.612 - - - - - 0.769 0.843 - -
9. BICC1 BICC1 264 1.598 0.826 - - - - 0.772 - - -
10. dcbld1 ENSDARG00000015907 36 1.572 - 0.820 - - - - 0.752 - - discoidin, CUB and LCCL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050913-77]
11. SLC41A2 SLC41A2 202 1.571 - - 0.774 - - - 0.797 - -
12. slc3a1 ENSDARG00000017165 136 1.562 - - - - - 0.748 0.814 - - solute carrier family 3 (amino acid transporter heavy chain), member 1 [Source:ZFIN;Acc:ZDB-GENE-090313-225]
13. eps8l3 eps8l3 144 1.559 - - - - - 0.722 0.837 - -
14. EFEMP1 32 1.548 - - - - - 0.717 0.831 - - EGF containing fibulin-like extracellular matrix protein 1, transcript variant X1
15. dnase2 ENSDARG00000073893 141 1.545 - 0.723 - - - - 0.822 - - deoxyribonuclease II, lysosomal [Source:ZFIN;Acc:ZDB-GENE-010724-16]
16. ca9 ENSDARG00000102300 193 1.53 - - - - - 0.746 0.784 - - carbonic anhydrase IX [Source:ZFIN;Acc:ZDB-GENE-080818-5]
17. pdzk1ip1l pdzk1ip1l 171 1.504 0.781 - - - - - 0.723 - -
18. si:ch211-264e16.1 ENSDARG00000068947 1358 1.5 - 0.703 0.797 - - - - - - si:ch211-264e16.1 [Source:ZFIN;Acc:ZDB-GENE-060503-226]
19. SLC47A1_2 SLC47A1_2 50 1.483 - 0.723 - - - - 0.760 - -
20. angptl2a ENSDARG00000024030 8 1.475 - 0.723 - - - - 0.752 - - angiopoietin-like 2a [Source:ZFIN;Acc:ZDB-GENE-080721-15]
21. dazl ENSDARG00000036214 11 1.47 - - - - - - 0.720 0.750 - deleted in azoospermia-like [Source:ZFIN;Acc:ZDB-GENE-000405-6]
22. zgc:73228 zgc:73228 97 1.462 - 0.723 - - - - 0.739 - -
23. mpg ENSDARG00000069729 43 1.437 - 0.723 - - - - - 0.714 - N-methylpurine DNA glycosylase [Source:ZFIN;Acc:ZDB-GENE-070410-121]
24. SYNGAP1_1 SYNGAP1_1 66 1.432 - 0.723 - - - - 0.709 - -
25. wdtc1 ENSDARG00000059760 1218 1.417 - - 0.714 - - - 0.703 - - WD and tetratricopeptide repeats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3224]
26. si:dkey-31e10.6 si:dkey-31e10.6 113 1 - 1.000 - - - - - - -
27. ndufv3_1 ENSDARG00000090389 25 1 - 1.000 - - - - - - - NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
28. myct1 myct1 217 0.967 0.967 - - - - - - - -
29. ccm2l ENSDARG00000063089 100 0.952 0.952 - - - - - - - - CCM2 like scaffold protein [Source:ZFIN;Acc:ZDB-GENE-090313-248]
30. cx23 ENSDARG00000054150 115 0.952 0.952 - - - - - - - - connexin 23 [Source:ZFIN;Acc:ZDB-GENE-050320-121]
31. cd40 ENSDARG00000054968 90 0.945 - - 0.945 - - - - - - CD40 molecule, TNF receptor superfamily member 5 [Source:ZFIN;Acc:ZDB-GENE-090313-95]
32. rxraa ENSDARG00000057737 750 0.944 - - - - - - 0.944 - - retinoid X receptor, alpha a [Source:ZFIN;Acc:ZDB-GENE-070314-2]
33. tekt3 ENSDARG00000045038 9 0.941 - 0.941 - - - - - - - tektin 3 [Source:ZFIN;Acc:ZDB-GENE-080130-2]
34. chmp6b ENSDARG00000102024 37 0.941 - 0.941 - - - - - - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
35. zgc:110224 ENSDARG00000032263 147 0.941 - 0.941 - - - - - - - zgc:110224 [Source:ZFIN;Acc:ZDB-GENE-050417-120]
36. mfsd2aa ENSDARG00000030630 66 0.941 - 0.941 - - - - - - - major facilitator superfamily domain containing 2aa [Source:ZFIN;Acc:ZDB-GENE-041114-166]
37. klf9 ENSDARG00000068194 5 0.941 - 0.941 - - - - - - - Kruppel-like factor 9 [Source:ZFIN;Acc:ZDB-GENE-060526-244]
38. NAV1 NAV1 23 0.938 - 0.938 - - - - - - -
39. CABZ01059627.1 ENSDARG00000078394 101 0.935 - - 0.935 - - - - - -
40. pgap2 ENSDARG00000044596 60 0.932 - - 0.932 - - - - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
41. si:ch73-27e22.3 ENSDARG00000077263 10 0.931 - - 0.931 - - - - - - si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231]
42. CABZ01022254.1 CABZ01022254.1 9 0.931 - - 0.931 - - - - - -
43. SVEP1 ENSDARG00000013526 16 0.93 - - 0.930 - - - - - - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-110726-1]
44. THEG ENSDARG00000078644 121 0.929 - - 0.929 - - - - - - theg spermatid protein [Source:ZFIN;Acc:ZDB-GENE-070912-59]
45. arsa ENSDARG00000042270 74 0.929 - - 0.929 - - - - - - arylsulfatase A [Source:ZFIN;Acc:ZDB-GENE-050320-118]
46. fam46a fam46a 92 0.929 0.929 - - - - - - - -
47. alkbh1 ENSDARG00000071164 140 0.929 - 0.929 - - - - - - - alkB homolog 1, histone H2A dioxygenase [Source:ZFIN;Acc:ZDB-GENE-050522-196]
48. si:dkey-24i24.3 ENSDARG00000088452 27 0.928 - - 0.928 - - - - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
49. wu:fj08f03 wu:fj08f03 1337 0.927 - - 0.927 - - - - - -
50. gcnt3 ENSDARG00000060471 37 0.927 - - 0.927 - - - - - - glucosaminyl (N-acetyl) transferase 3, mucin type [Source:ZFIN;Acc:ZDB-GENE-110411-253]
51. si:ch211-243a20.3 ENSDARG00000092240 151 0.926 - - 0.926 - - - - - - si:ch211-243a20.3 [Source:ZFIN;Acc:ZDB-GENE-061207-28]
52. si:dkey-164n2.1 47 0.924 - - 0.924 - - - - - - si:dkey-164n2.1, transcript variant X1
53. irf1b ENSDARG00000043249 30 0.923 - - 0.923 - - - - - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
54. zgc:162180 zgc:162180 31 0.923 - - 0.923 - - - - - -
55. rad54b ENSDARG00000092134 231 0.922 - 0.922 - - - - - - - RAD54 homolog B [Source:ZFIN;Acc:ZDB-GENE-060810-50]
56. cdc42ep2 ENSDARG00000053959 32 0.921 - - 0.921 - - - - - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
57. asic1b ENSDARG00000101866 61 0.921 - - 0.921 - - - - - - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
58. CABZ01027547.1 CABZ01027547.1 128 0.92 - - 0.920 - - - - - -
59. nanos3 ENSDARG00000068255 319 0.92 - - - - - - 0.920 - - nanos homolog 3 [Source:ZFIN;Acc:ZDB-GENE-011221-1]
60. map1lc3c ENSDARG00000100528 31 0.918 - - 0.918 - - - - - - microtubule-associated protein 1 light chain 3 gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1080]
61. trip4 ENSDARG00000098074 79 0.918 - - 0.918 - - - - - - thyroid hormone receptor interactor 4 [Source:ZFIN;Acc:ZDB-GENE-040724-92]
62. chico ENSDARG00000019588 77 0.916 - - 0.916 - - - - - - chico [Source:ZFIN;Acc:ZDB-GENE-000210-28]
63. ZNF337_20 ZNF337_20 65 0.915 - - 0.915 - - - - - -
64. si:ch211-263m18.4 ENSDARG00000093353 27 0.915 - - 0.915 - - - - - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
65. CU459152.1 CU459152.1 407 0.914 - - 0.914 - - - - - -
66. CR391995.1 ENSDARG00000098041 48 0.913 - - - - - - 0.913 - -
67. si:dkey-256e21.1 si:dkey-256e21.1 11 0.912 0.912 - - - - - - - -
68. BX649494.1 BX649494.1 195 0.907 - - 0.907 - - - - - -
69. fnbp1l ENSDARG00000020131 79 0.906 - - 0.906 - - - - - - formin binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040801-155]
70. bmp6 ENSDARG00000015686 211 0.906 - - 0.906 - - - - - - bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
71. thbs2b ENSDARG00000073810 870 0.904 - - 0.904 - - - - - - thrombospondin 2b [Source:ZFIN;Acc:ZDB-GENE-100623-1]
72. si:dkey-225n22.4 ENSDARG00000077245 86 0.904 - - - - - 0.904 - - - si:dkey-225n22.4 [Source:ZFIN;Acc:ZDB-GENE-120709-30]
73. CU633908.1 ENSDARG00000113928 222 0.902 - 0.902 - - - - - - - beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) b [Source:NCBI gene;Acc:100332644]
74. zgc:153733 ENSDARG00000110325, ENSDARG00000111744, ENSDARG00000114452 176 0.901 - 0.901 - - - - - - - zgc:153733 [Source:ZFIN;Acc:ZDB-GENE-060825-273]
75. zgc:110353 ENSDARG00000039443 80 0.901 - - 0.901 - - - - - - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
76. CABZ01068473.1 CABZ01068473.1 67 0.901 - - 0.901 - - - - - -
77. BX548021.2_1 BX548021.2_1 164 0.901 - - 0.901 - - - - - -
78. LPXN ENSDARG00000079315 12 0.9 - - - - - - 0.900 - - leupaxin [Source:ZFIN;Acc:ZDB-GENE-081105-159]
79. rbl1 ENSDARG00000008141 1217 0.9 - - - - - - 0.900 - - retinoblastoma-like 1 (p107) [Source:ZFIN;Acc:ZDB-GENE-030131-8179]
80. si:dkey-177p2.15p si:dkey-177p2.15p 20 0.899 - 0.899 - - - - - - -
81. DRAXIN ENSDARG00000058256, ENSDARG00000111676 152 0.898 - - 0.898 - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
82. ctssa ctssa 24 0.898 0.898 - - - - - - - -
83. CABZ01084613.1 CABZ01084613.1 22 0.898 0.898 - - - - - - - -
84. galk1 ENSDARG00000028088 540 0.898 - - - - - - 0.898 - - galactokinase 1 [Source:ZFIN;Acc:ZDB-GENE-041010-79]
85. MTERFD2 MTERFD2 140 0.898 - - - - - - 0.898 - -
86. si:ch211-162i8.6 si:ch211-162i8.6 15 0.898 0.898 - - - - - - - -
87. si:ch73-338a16.3 ENSDARG00000101159 18 0.898 0.898 - - - - - - - - si:ch73-338a16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-227]
88. aldh3a2a ENSDARG00000028259 591 0.898 - - 0.898 - - - - - - aldehyde dehydrogenase 3 family, member A2a [Source:ZFIN;Acc:ZDB-GENE-040718-74]
89. zgc:174708 zgc:174708 11 0.898 0.898 - - - - - - - -
90. slc13a2 ENSDARG00000053853 1164 0.898 0.898 - - - - - - - - solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2389]
91. RAB35 RAB35 4 0.898 0.898 - - - - - - - -
92. zgc:162235 zgc:162235 9 0.898 0.898 - - - - - - - -
93. SLC2A4RG SLC2A4RG 47 0.898 0.898 - - - - - - - -
94. FAT4 ENSDARG00000105285 11 0.898 0.898 - - - - - - - - FAT atypical cadherin 4 [Source:HGNC Symbol;Acc:HGNC:23109]
95. dock4b ENSDARG00000024874 32 0.897 - - 0.897 - - - - - - dedicator of cytokinesis 4b [Source:ZFIN;Acc:ZDB-GENE-060130-74]
96. rab25a ENSDARG00000058800 451 0.896 - - 0.896 - - - - - - RAB25, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041212-69]
97. gpr155a ENSDARG00000090804 27 0.896 - - 0.896 - - - - - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
98. BX004873.3 BX004873.3 59 0.896 - - 0.896 - - - - - -
99. PEG3_12 PEG3_12 128 0.895 - - 0.895 - - - - - -
100. CABZ01081748.1 ENSDARG00000102139 31 0.895 - - 0.895 - - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]

There are 864 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA