Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:rp71-45g20.6

Gene Name Gene ID Reads Annotation
si:rp71-45g20.6 si:rp71-45g20.6 19










Genes with expression patterns similar to si:rp71-45g20.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:rp71-45g20.6 si:rp71-45g20.6 19 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000
2. si:dkeyp-69c1.9 ENSDARG00000091888 39 2.493 - 0.915 - 0.831 - - - - 0.747 si:dkeyp-69c1.9 [Source:ZFIN;Acc:ZDB-GENE-030131-1774]
3. SNORD10 SNORD10 71 2.35 - 0.716 - 0.800 - - 0.834 - -
4. si:ch211-199g17.8 si:ch211-199g17.8 9 2 - 1.000 1.000 - - - - - -
5. ankar ENSDARG00000000516 3 2 - 1.000 1.000 - - - - - - ankyrin and armadillo repeat containing [Source:ZFIN;Acc:ZDB-GENE-030616-533]
6. CU655961.3 ENSDARG00000106724 14 2 - 1.000 - - - - 1.000 - -
7. cpne5a ENSDARG00000061466, ENSDARG00000111461 105 1.885 0.885 1.000 - - - - - - - copine Va [Source:ZFIN;Acc:ZDB-GENE-081105-9]
8. sftpba ENSDARG00000094708 2 1.834 - 1.000 - - - - 0.834 - - surfactant protein Ba [Source:ZFIN;Acc:ZDB-GENE-091204-378]
9. si:dkey-115f9.2 si:dkey-115f9.2 18 1.834 - - 1.000 - - - 0.834 - -
10. C12H17orf70 C12H17orf70 25 1.834 - 1.000 - - - - 0.834 - -
11. mir30b 4 1.834 - 1.000 - - - - 0.834 - - microRNA 30b
12. fam213ab 1 1.834 - 1.000 - - - - 0.834 - - family with sequence similarity 213, member Ab
13. si:ch1073-155h21.1 ENSDARG00000007582 137 1.834 - - - - - - 0.834 1.000 - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
14. EDN3 14 1.834 - 1.000 - - - - 0.834 - - endothelin 3
15. ZNF337_23 ZNF337_23 39 1.834 - 1.000 - - - - 0.834 - -
16. CR381673.2 ENSDARG00000103241 7 1.834 - 1.000 - - - - 0.834 - -
17. si:ch73-59c19.1 ENSDARG00000091909 64 1.809 - 1.000 - - - - 0.809 - - si:ch73-59c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-247]
18. kcnab2b ENSDARG00000062134 80 1.805 1.000 - - - - - 0.805 - - potassium voltage-gated channel, shaker-related subfamily, beta member 2 b [Source:ZFIN;Acc:ZDB-GENE-080219-36]
19. si:dkey-113d16.9 si:dkey-113d16.9 345 1.802 0.802 1.000 - - - - - - -
20. FP236162.1 FP236162.1 2 1.802 0.802 1.000 - - - - - - -
21. CU694319.1 CU694319.1 72 1.797 - 1.000 - - - - 0.797 - -
22. grin2ab ENSDARG00000070543 31 1.778 0.802 - - - 0.976 - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b [Source:ZFIN;Acc:ZDB-GENE-070424-223]
23. CR854948.2 CR854948.2 4 1.766 0.802 - - - - - 0.964 - -
24. si:dkeyp-35e5.9 ENSDARG00000103527 24 1.763 - 1.000 - - - - 0.763 - - si:dkeyp-35e5.9 [Source:ZFIN;Acc:ZDB-GENE-110913-107]
25. kcnn1a ENSDARG00000091306 95 1.76 0.760 1.000 - - - - - - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a [Source:ZFIN;Acc:ZDB-GENE-070912-703]
26. cpeb1b ENSDARG00000008454 37 1.744 0.802 - - - - - 0.942 - - cytoplasmic polyadenylation element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-990927-1]
27. C2CD4A ENSDARG00000061416 61 1.738 0.738 1.000 - - - - - - - C2 calcium dependent domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-030131-5712]
28. si:ch1073-185p12.2 ENSDARG00000100199 7 1.726 - 1.000 - - - - 0.726 - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
29. FOLR1 FOLR1 25 1.724 - - 0.890 - - - 0.834 - -
30. CR383676.3_2 CR383676.3_2 9 1.719 0.802 0.917 - - - - - - -
31. tsen54 ENSDARG00000036844 11 1.719 - 1.000 - - - - - - 0.719 TSEN54 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-050522-454]
32. si:dkey-92j16.1 si:dkey-92j16.1 1 1.712 - 0.712 - - - - - 1.000 -
33. CR753866.2 CR753866.2 6 1.705 - 0.712 0.993 - - - - - -
34. USP43 USP43 14 1.697 - - 0.934 - - - 0.763 - -
35. CABZ01021426.1 CABZ01021426.1 25 1.682 - - 0.742 - - - 0.940 - -
36. C6H21orf58 C6H21orf58 14 1.673 - - - - 0.916 - 0.757 - -
37. si:ch211-250m6.8 si:ch211-250m6.8 51 1.637 - - - - 0.803 - 0.834 - -
38. dock11 ENSDARG00000062485 17 1.636 0.802 - - - - - 0.834 - - dedicator of cytokinesis 11 [Source:ZFIN;Acc:ZDB-GENE-060503-196]
39. wu:fe11b02_1 wu:fe11b02_1 7 1.636 0.802 - - - - - 0.834 - -
40. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1.636 0.802 - - - - - 0.834 - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
41. vgf ENSDARG00000105529 247 1.627 0.721 0.906 - - - - - - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
42. si:dkey-157g16.6 ENSDARG00000057062 12 1.587 - - 0.829 - - - - - 0.758 si:dkey-157g16.6 [Source:ZFIN;Acc:ZDB-GENE-090313-189]
43. pot1 ENSDARG00000079915 42 1.57 - - - - - - 0.762 - 0.808 protection of telomeres 1 homolog [Source:ZFIN;Acc:ZDB-GENE-110324-1]
44. ube2b ENSDARG00000026035 51 1.566 0.832 0.734 - - - - - - - ubiquitin-conjugating enzyme E2B (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-040718-247]
45. mirlet7a-6 15 1.551 - - 0.759 - - - 0.792 - - microRNA let7a-6
46. 5_8S_rRNA 5_8S_rRNA 24 1.547 - - - - - - 0.834 0.713 -
47. camta1a ENSDARG00000077428, ENSDARG00000116922 176 1.544 0.723 - 0.821 - - - - - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
48. ubxn10 ENSDARG00000052535 24 1.514 - 0.747 - - - - 0.767 - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
49. slco2b1 ENSDARG00000054609 68 1.513 - 0.747 0.766 - - - - - - solute carrier organic anion transporter family, member 2B1 [Source:ZFIN;Acc:ZDB-GENE-051023-6]
50. c1ql3b ENSDARG00000028521, ENSDARG00000036483 40 1.512 - 0.712 - 0.800 - - - - - complement component 1, q subcomponent-like 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1836]
51. C14orf80 C14orf80 20 1.51 - 0.747 - - - - 0.763 - -
52. mfsd4b ENSDARG00000079571 556 1.489 - 0.781 - - - - 0.708 - - major facilitator superfamily domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-070410-26]
53. ek1 ENSDARG00000020080 742 1.465 0.727 0.738 - - - - - - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
54. tmprss15 ENSDARG00000079393 25 1.447 0.700 - - - 0.747 - - - - transmembrane serine protease 15 [Source:ZFIN;Acc:ZDB-GENE-091204-83]
55. SHANK1 ENSDARG00000060539 102 1.44 - - 0.728 - - - 0.712 - - SH3 and multiple ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130530-691]
56. si:ch73-367f21.5 ENSDARG00000089503 55 1.43 - 0.729 - - - - 0.701 - - si:ch73-367f21.5 [Source:ZFIN;Acc:ZDB-GENE-120214-29]
57. BX323793.1 ENSDARG00000104134 24 1 - - - - - - - 1.000 - 1-phosphatidylinositol phosphodiesterase-like [Source:NCBI gene;Acc:100331378]
58. ncam2 ENSDARG00000017466 175 1 - 1.000 - - - - - - - neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
59. CR936975.1 ENSDARG00000096862 22 1 - 1.000 - - - - - - -
60. si:ch1073-464p5.5 ENSDARG00000079544 5 1 - 1.000 - - - - - - - si:ch1073-464p5.5 [Source:ZFIN;Acc:ZDB-GENE-091116-35]
61. FP325123.1_1 ENSDARG00000105359 38 1 - 1.000 - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
62. FP102786.1 ENSDARG00000090551 3 1 - 1.000 - - - - - - - GTPase IMAP family member 8-like [Source:NCBI gene;Acc:101882698]
63. C1GALT1_1 C1GALT1_1 1 1 - 1.000 - - - - - - -
64. ATXN1 ATXN1 12 1 - 1.000 - - - - - - -
65. itln1 ENSDARG00000007534 8 1 - 1.000 - - - - - - - intelectin 1 [Source:ZFIN;Acc:ZDB-GENE-060929-564]
66. ANKRD27 ENSDARG00000089207 3 1 - - - - - - - 1.000 - ankyrin repeat domain 27 (VPS9 domain) [Source:ZFIN;Acc:ZDB-GENE-121105-1]
67. b3gat2 ENSDARG00000030733 348 1 - 1.000 - - - - - - - beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:ZFIN;Acc:ZDB-GENE-040801-191]
68. asf1ba_1 ENSDARG00000101037 3 1 - 1.000 - - - - - - - anti-silencing function 1Ba histone chaperone [Source:ZFIN;Acc:ZDB-GENE-031118-197]
69. CU693369.1 CU693369.1 2 1 - 1.000 - - - - - - -
70. CABZ01079979.1 CABZ01079979.1 1 1 - 1.000 - - - - - - -
71. clcn1b ENSDARG00000012269 12 1 - - 1.000 - - - - - - chloride channel, voltage-sensitive 1b [Source:ZFIN;Acc:ZDB-GENE-100921-11]
72. C20H2orf70 C20H2orf70 8 1 - - - - - - - 1.000 -
73. DBNDD1 DBNDD1 43 1 - 1.000 - - - - - - -
74. th2 ENSDARG00000038384 1 1 - - - - - - - 1.000 - tyrosine hydroxylase 2 [Source:ZFIN;Acc:ZDB-GENE-050201-1]
75. cldn15b ENSDARG00000101109 4 1 - - - - - - - 1.000 - claudin 15b [Source:ZFIN;Acc:ZDB-GENE-060421-7652]
76. kcnc2 ENSDARG00000057468 12 1 - - 1.000 - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-070410-118]
77. si:dkey-119p2.1 si:dkey-119p2.1 1 1 - - - - - - - 1.000 -
78. clcn1a ENSDARG00000062084 120 1 - 1.000 - - - - - - - chloride channel, voltage-sensitive 1a [Source:ZFIN;Acc:ZDB-GENE-060503-333]
79. si:ch211-262h13.4 si:ch211-262h13.4 3 1 - 1.000 - - - - - - -
80. fancf ENSDARG00000019250 111 1 - 1.000 - - - - - - - FA complementation group F [Source:ZFIN;Acc:ZDB-GENE-060306-3]
81. clcf1 ENSDARG00000076140 5 1 - - 1.000 - - - - - - cardiotrophin-like cytokine factor 1 [Source:ZFIN;Acc:ZDB-GENE-110411-244]
82. BX248582.3 BX248582.3 3 1 - 1.000 - - - - - - -
83. prph2a ENSDARG00000038018 2 1 - 1.000 - - - - - - - peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
84. ankrd45 ENSDARG00000011326 62 1 - 1.000 - - - - - - - ankyrin repeat domain 45 [Source:ZFIN;Acc:ZDB-GENE-050522-311]
85. gata1b ENSDARG00000059130 151 1 - 1.000 - - - - - - - GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]
86. CR854963.2 ENSDARG00000114235 82 1 - 1.000 - - - - - - -
87. lrrn3 lrrn3 137 1 - 1.000 - - - - - - -
88. zgc:162060 ENSDARG00000078012 0 1 - - - - - - - 1.000 - zgc:162060 [Source:ZFIN;Acc:ZDB-GENE-070424-18]
89. dhcr24 ENSDARG00000013236 61 1 - 1.000 - - - - - - - 24-dehydrocholesterol reductase [Source:ZFIN;Acc:ZDB-GENE-041212-73]
90. si:dkey-11f14.2 si:dkey-11f14.2 2 1 - 1.000 - - - - - - -
91. FP085391.2 FP085391.2 85 1 - 1.000 - - - - - - -
92. gabpb1 ENSDARG00000023659 26 1 - 1.000 - - - - - - - GA binding protein transcription factor subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061027-46]
93. si:ch211-162i8.2 ENSDARG00000096041 4 1 - 1.000 - - - - - - - si:ch211-162i8.2 [Source:ZFIN;Acc:ZDB-GENE-110913-56]
94. slc1a3b ENSDARG00000043148 431 1 - 1.000 - - - - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]
95. TNS3_1 TNS3_1 8 1 - 1.000 - - - - - - -
96. prkcba ENSDARG00000008723, ENSDARG00000116813 30 1 - 1.000 - - - - - - - protein kinase C, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1354]
97. TTBK1 TTBK1 120 1 - 1.000 - - - - - - -
98. ptger4a ENSDARG00000059236 13 1 - 1.000 - - - - - - - prostaglandin E receptor 4 (subtype EP4) a [Source:ZFIN;Acc:ZDB-GENE-060222-1]
99. eef1a1a ENSDARG00000039502 234 1 1.000 - - - - - - - - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
100. pvalb6 ENSDARG00000009311, ENSDARG00000113947 248 1 - 1.000 - - - - - - - parvalbumin 6 [Source:ZFIN;Acc:ZDB-GENE-040912-95]

There are 1097 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA