Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:rp71-36d5.4

Gene Name Gene ID Reads Annotation
si:rp71-36d5.4 si:rp71-36d5.4 20










Genes with expression patterns similar to si:rp71-36d5.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:rp71-36d5.4 si:rp71-36d5.4 20 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. nfil3-4 ENSDARG00000092346 3 2 - - - - - 1.000 1.000 - - nuclear factor, interleukin 3 regulated, member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-214]
3. si:dkey-2j6.2 si:dkey-2j6.2 5 2 - - - - - 1.000 1.000 - -
4. supt7l ENSDARG00000013461 41 2 - - - - - 1.000 1.000 - - SPT7-like STAGA complex gamma subunit [Source:ZFIN;Acc:ZDB-GENE-050227-17]
5. CT573468.1 CT573468.1 283 1.958 - - - - - 1.000 0.958 - -
6. spef2 ENSDARG00000098330 59 1.905 - - - - - 1.000 0.905 - - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
7. ZP2_2 ZP2_2 28 1.837 - - - - - - 0.910 - 0.927
8. axdnd1 ENSDARG00000062355 30 1.795 - - - - - 1.000 0.795 - - axonemal dynein light chain domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-341]
9. HIST1H2BA ENSDARG00000116654 10 1.777 - - - - - - 1.000 - 0.777 histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
10. si:ch211-81g2.1 si:ch211-81g2.1 5 1.77 - - - 0.770 - - 1.000 - -
11. tlr4bb ENSDARG00000022048, ENSDARG00000110914 2 1.77 - - - 0.770 - - 1.000 - - toll-like receptor 4b, duplicate b [Source:ZFIN;Acc:ZDB-GENE-040219-9]
12. rfc4 ENSDARG00000042458 2 1.77 - - - 0.770 - - 1.000 - - replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]
13. si:dkey-114b16.4 si:dkey-114b16.4 35 1.735 - - - - - 1.000 0.735 - -
14. si:dkey-117n7.2 ENSDARG00000093135 40 1.733 - - - - - 1.000 - - 0.733 si:dkey-117n7.2 [Source:ZFIN;Acc:ZDB-GENE-060503-49]
15. CR788231.1 CR788231.1 61 1.716 - - - - - - 1.000 - 0.716
16. aqp9b ENSDARG00000053480 16 1.706 - - - - 0.706 1.000 - - - aquaporin 9b [Source:ZFIN;Acc:ZDB-GENE-070911-1]
17. tm4sf4 ENSDARG00000040747 65 1.656 - - - - - 0.881 0.775 - - transmembrane 4 L six family member 4 [Source:ZFIN;Acc:ZDB-GENE-040801-231]
18. zbtb34 ENSDARG00000013492 32 1.627 - - - - - - 0.754 - 0.873 zinc finger and BTB domain containing 34 [Source:ZFIN;Acc:ZDB-GENE-050624-2]
19. bokb ENSDARG00000008807 29 1.572 - - - - - - 0.816 - 0.756 BOK, BCL2 family apoptosis regulator b [Source:ZFIN;Acc:ZDB-GENE-040426-1346]
20. ddx54 ENSDARG00000105286 183 1.561 - - - - - 0.768 0.793 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Source:ZFIN;Acc:ZDB-GENE-021220-2]
21. gdpd3b ENSDARG00000006944 19 1.543 - - - - - 0.742 0.801 - - glycerophosphodiester phosphodiesterase domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-121210-2]
22. cnfn ENSDARG00000041115 21 1.542 - - - - 0.718 - - - 0.824 cornifelin [Source:ZFIN;Acc:ZDB-GENE-040912-110]
23. si:rp71-17i16.6 ENSDARG00000095453 167 1.537 - - - - - 0.755 0.782 - - si:rp71-17i16.6 [Source:ZFIN;Acc:ZDB-GENE-090313-410]
24. grxcr1 ENSDARG00000069865 22 1.529 - - - - - - 0.813 - 0.716 glutaredoxin, cysteine rich 1 [Source:ZFIN;Acc:ZDB-GENE-070424-166]
25. MYCT1 MYCT1 64 1.527 - - - - - 0.707 0.820 - -
26. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1.488 - - - 0.770 0.718 - - - - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
27. ENSDARG00000076021 ENSDARG00000076021 162 1.438 - - 0.708 - 0.730 - - - -
28. lmx1a ENSDARG00000020354 111 1 - - - - - - 1.000 - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
29. si:ch211-117i10.10 si:ch211-117i10.10 18 1 - - - - - 1.000 - - -
30. BX465203.1 ENSDARG00000113985 8 1 - - - - - 1.000 - - -
31. aven ENSDARG00000002894 49 1 - - - - - - 1.000 - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
32. MEX3D MEX3D 293 1 - - - - - 1.000 - - -
33. si:dkey-211g8.7 ENSDARG00000058535 5 1 - - - - - - 1.000 - - si:dkey-211g8.7 [Source:ZFIN;Acc:ZDB-GENE-060503-907]
34. si:ch211-59h6.1 ENSDARG00000013022 193 1 - - - - - 1.000 - - - si:ch211-59h6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-418]
35. serpinb1l2 ENSDARG00000070396 37 1 - - - - - - 1.000 - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041001-117]
36. si:ch211-126g16.8 3 1 - - - - - 1.000 - - - si:ch211-126g16.8, transcript variant X1
37. otx5 ENSDARG00000043483 282 1 - - - - - 1.000 - - - orthodenticle homolog 5 [Source:ZFIN;Acc:ZDB-GENE-030508-1]
38. CABZ01112215.1 CABZ01112215.1 23 1 - - - - - - 1.000 - -
39. PLEKHS1_1 PLEKHS1_1 23 1 - - - - - 1.000 - - -
40. NACC2 160 1 - - - - - - 1.000 - - NACC family member 2
41. GMNC ENSDARG00000068719 28 1 - - - - - 1.000 - - - geminin coiled-coil domain containing [Source:ZFIN;Acc:ZDB-GENE-121211-1]
42. syne3 ENSDARG00000023237 23 1 - - - - - 1.000 - - - spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
43. sema6e ENSDARG00000000189 35 1 - - - - - 1.000 - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E [Source:ZFIN;Acc:ZDB-GENE-040724-119]
44. CR388132.1 ENSDARG00000097728 61 1 - - - - - - 1.000 - -
45. ggcta ENSDARG00000076406 33 1 - - - - - 1.000 - - - gamma-glutamylcyclotransferase a [Source:ZFIN;Acc:ZDB-GENE-081104-129]
46. si:dkeyp-13d11.2 79 1 - - - - - 1.000 - - - si:dkeyp-13d11.2
47. col5a3b ENSDARG00000101816 56 1 - - - - - 1.000 - - - collagen, type V, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-110728-4]
48. si:dkey-8o9.6 si:dkey-8o9.6 0 1 - - - - - 1.000 - - -
49. BX511189.1 BX511189.1 34 1 - - - - - - 1.000 - -
50. U6_12 U6_12 0 1 - - - - - 1.000 - - -
51. col7a1l ENSDARG00000069692 44 1 - - - - - 1.000 - - - collagen type VII alpha 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9861]
52. tmem168b ENSDARG00000062168 17 1 - - - - - 1.000 - - - transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
53. RP1 ENSDARG00000077687 6 1 - - - - - 1.000 - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
54. mcm3l ENSDARG00000037532, ENSDARG00000110461 7 1 - - - - - 1.000 - - - MCM3 minichromosome maintenance deficient 3 (S. cerevisiae), like [Source:ZFIN;Acc:ZDB-GENE-040121-2]
55. si:dkey-93m18.5 si:dkey-93m18.5 2 1 - - - - - 1.000 - - -
56. nedd9 ENSDARG00000089878, ENSDARG00000116312 41 1 - - - - - 1.000 - - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
57. si:dkey-228d14.8 si:dkey-228d14.8 3 1 - - - - - - 1.000 - -
58. p2rx1 ENSDARG00000016695, ENSDARG00000110431 9 1 - - - - - 1.000 - - - purinergic receptor P2X, ligand-gated ion channel, 1 [Source:ZFIN;Acc:ZDB-GENE-030319-1]
59. BX537113.1_1 BX537113.1_1 3 1 - - - - - 1.000 - - -
60. KBTBD3 ENSDARG00000060512 42 1 - - - - - 1.000 - - - kelch repeat and BTB (POZ) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-131016-5]
61. epb41l3b ENSDARG00000019917 9 1 - - - - - 1.000 - - - erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
62. grid1b ENSDARG00000044161 20 1 - - - - - - 1.000 - - glutamate receptor, ionotropic, delta 1b [Source:ZFIN;Acc:ZDB-GENE-121214-84]
63. si:dkey-201i6.5 si:dkey-201i6.5 3 1 - - - - - - 1.000 - -
64. sts ENSDARG00000053241 10 1 - - - - - - 1.000 - - steroid sulfatase (microsomal), isozyme S [Source:ZFIN;Acc:ZDB-GENE-030717-5]
65. adrb3b ENSDARG00000052919 16 1 - - - - - - 1.000 - - adrenoceptor beta 3b [Source:ZFIN;Acc:ZDB-GENE-081022-154]
66. BX323796.1 BX323796.1 2 1 - - - - - 1.000 - - -
67. lrp2bp ENSDARG00000040478 21 1 - - - - - - 1.000 - - LRP2 binding protein [Source:ZFIN;Acc:ZDB-GENE-070615-41]
68. CABZ01074946.1 CABZ01074946.1 119 1 - - - - - 1.000 - - -
69. HPX ENSDARG00000012609 781 1 - - - - - 1.000 - - - hemopexin [Source:ZFIN;Acc:ZDB-GENE-030131-5773]
70. si:dkey-24i24.3 ENSDARG00000088452 27 1 - - - - - 1.000 - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
71. si:dkey-220o21.5 si:dkey-220o21.5 24 1 - - - - - 1.000 - - -
72. TRPM6 ENSDARG00000103454 15 1 - - - - - - 1.000 - - transient receptor potential cation channel, subfamily M, member 6 [Source:ZFIN;Acc:ZDB-GENE-111212-1]
73. si:ch211-120c15.1 si:ch211-120c15.1 20 1 - - - - - - 1.000 - -
74. si:dkey-19a16.7 ENSDARG00000071644 460 1 - - - - - - 1.000 - - si:dkey-19a16.7 [Source:ZFIN;Acc:ZDB-GENE-060503-903]
75. pmvk ENSDARG00000070798, ENSDARG00000109348 76 1 - - - - - 1.000 - - - phosphomevalonate kinase [Source:ZFIN;Acc:ZDB-GENE-070410-91]
76. STPG2 ENSDARG00000061060 16 1 - - - - - 1.000 - - - sperm-tail PG-rich repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-061013-667]
77. tagapa ENSDARG00000002353 20 1 - - - - - 1.000 - - - T cell activation RhoGTPase activating protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1877]
78. si:dkeyp-34a4.1 si:dkeyp-34a4.1 0 1 - - - - - 1.000 - - -
79. BX470224.1 ENSDARG00000092793 22 1 - - - - - - 1.000 - -
80. adipoqa ENSDARG00000062228 7 1 - - - - - - 1.000 - - adiponectin, C1Q and collagen domain containing, a [Source:ZFIN;Acc:ZDB-GENE-080423-2]
81. drl ENSDARG00000078004 43 1 - - - - - 1.000 - - - draculin [Source:ZFIN;Acc:ZDB-GENE-991213-3]
82. si:dkey-285e18.3 si:dkey-285e18.3 10 1 - - - - - 1.000 - - -
83. cyp39a1 ENSDARG00000017982 4 1 - - - - - - 1.000 - - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
84. si:dkeyp-4f2.6 ENSDARG00000095596 3 1 - - - - - 1.000 - - - si:dkeyp-4f2.6 [Source:ZFIN;Acc:ZDB-GENE-110914-212]
85. BX000477.1 BX000477.1 1 1 - - - - - 1.000 - - -
86. dnah11 ENSDARG00000077384, ENSDARG00000094282 15 1 - - - - - 1.000 - - - dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
87. itgb1b ENSDARG00000104484 51 1 - - - - - 1.000 - - - integrin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-030909-10]
88. uts2a ENSDARG00000053854, ENSDARG00000116102 16 1 - - - - - - 1.000 - - urotensin 2, alpha [Source:ZFIN;Acc:ZDB-GENE-040630-11]
89. cx39.4 ENSDARG00000070357 17 1 - - - - - 1.000 - - - connexin 39.4 [Source:ZFIN;Acc:ZDB-GENE-050616-6]
90. rab14l ENSDARG00000035188 18 1 - - - - - 1.000 - - - RAB14, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-040426-1207]
91. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1 - - - - - - 1.000 - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
92. MEP1B ENSDARG00000037533, ENSDARG00000115538 10 1 - - - - - - 1.000 - - meprin A, beta [Source:ZFIN;Acc:ZDB-GENE-041014-209]
93. si:dkey-78k11.4 ENSDARG00000094399 13 1 - - - - - - 1.000 - - si:dkey-78k11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-740]
94. impact ENSDARG00000043288 7 1 - - - - - 1.000 - - - impact RWD domain protein [Source:ZFIN;Acc:ZDB-GENE-040927-10]
95. si:dkey-258p11.3 si:dkey-258p11.3 9 1 - - - - - - 1.000 - -
96. SNORA14 SNORA14 10 1 - - - - - 1.000 - - -
97. APP APP 0 1 - - - - - 1.000 - - -
98. ft2 ENSDARG00000109567 5 1 - - - - - 1.000 - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
99. GPR114 GPR114 1 1 - - - - - - 1.000 - -
100. sult1st3 ENSDARG00000018361 7 1 - - - - - - 1.000 - - sulfotransferase family 1, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-030804-28]

There are 749 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA