Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:rp71-1k13.5

Gene Name Gene ID Reads Annotation
si:rp71-1k13.5 si:rp71-1k13.5 2










Genes with expression patterns similar to si:rp71-1k13.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:rp71-1k13.5 si:rp71-1k13.5 2 2 - - - - 1.000 - - - 1.000
2. 5S_rRNA_6 5S_rRNA_6 11 1.749 - - - - 0.877 - - - 0.872
3. lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 1.714 - - - - 0.755 - - - 0.959 low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]
4. CU570981.1 CU570981.1 9 1.713 - - - - 0.755 - - - 0.958
5. mlxip ENSDARG00000059474 12 1.68 - - - - 0.755 - - - 0.925 MLX interacting protein [Source:ZFIN;Acc:ZDB-GENE-060526-8]
6. UNC80 ENSDARG00000098290 2 1.673 - - - - 0.755 - - - 0.918 unc-80 homolog (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-140106-167]
7. si:ch211-106h4.9 ENSDARG00000075706 36 1 - - - - 1.000 - - - - si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]
8. CACNA1H CACNA1H 34 1 - - - - 1.000 - - - -
9. si:ch211-214p13.9 ENSDARG00000091411 2 1 - - - - 1.000 - - - - si:ch211-214p13.9 [Source:ZFIN;Acc:ZDB-GENE-060503-213]
10. cx50.5 cx50.5 15 1 - - - - 1.000 - - - -
11. BX571712.3 ENSDARG00000098050 1 1 - - - - 1.000 - - - - si:dkeyp-9a1.2 [Source:NCBI gene;Acc:103909046]
12. si:dkeyp-73d8.9 ENSDARG00000076043 3 1 - - - - - - - - 1.000 si:dkeyp-73d8.9 [Source:ZFIN;Acc:ZDB-GENE-070912-685]
13. RIMBP2 ENSDARG00000001154, ENSDARG00000093752 9 1 - - - - 1.000 - - - - RIMS binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040724-96]
14. zgc:103510 ENSDARG00000027699 13 0.985 - - - - - - - - 0.985 zgc:103510 [Source:ZFIN;Acc:ZDB-GENE-041212-27]
15. camkvl ENSDARG00000057000 40 0.982 - - - - 0.982 - - - - CaM kinase-like vesicle-associated, like [Source:ZFIN;Acc:ZDB-GENE-090311-58]
16. si:dkey-250k10.4 ENSDARG00000099751 2 0.971 - - - - - - - - 0.971 si:dkey-250k10.4 [Source:ZFIN;Acc:ZDB-GENE-120703-22]
17. anpepa ENSDARG00000041083, ENSDARG00000111591 5 0.971 - - - - - - - - 0.971 alanyl (membrane) aminopeptidase a [Source:ZFIN;Acc:ZDB-GENE-030131-4781]
18. zgc:172271 ENSDARG00000013240 2 0.971 - - - - - - - - 0.971 zgc:172271 [Source:ZFIN;Acc:ZDB-GENE-080204-110]
19. BX682234.1 ENSDARG00000074732 5 0.971 - - - - - - - - 0.971 C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
20. illr1 ENSDARG00000059254 1 0.971 - - - - - - - - 0.971 immune-related, lectin-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050311-2]
21. gata4 ENSDARG00000098952 11 0.971 - - - - - - - - 0.971 GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476]
22. BX649415.2 BX649415.2 1 0.971 - - - - - - - - 0.971
23. ZNF384 ZNF384 3 0.971 - - - - - - - - 0.971
24. SNORD57 SNORD57 2 0.971 - - - - - - - - 0.971
25. snpha ENSDARG00000078485 4 0.971 - - - - - - - - 0.971 syntaphilin a [Source:ZFIN;Acc:ZDB-GENE-081104-227]
26. trim35-34 ENSDARG00000022271 1 0.971 - - - - - - - - 0.971 tripartite motif containing 35-34 [Source:ZFIN;Acc:ZDB-GENE-081030-23]
27. LPXN ENSDARG00000079315 12 0.971 - - - - - - - - 0.971 leupaxin [Source:ZFIN;Acc:ZDB-GENE-081105-159]
28. vtg2 ENSDARG00000055809, ENSDARG00000111529, ENSDARG00000114568 3 0.971 - - - - - - - - 0.971 vitellogenin 2 [Source:ZFIN;Acc:ZDB-GENE-001201-2]
29. si:ch211-165l15.1 si:ch211-165l15.1 10 0.971 - - - - - - - - 0.971
30. si:dkey-42l16.1 ENSDARG00000071020 1 0.971 - - - - - - - - 0.971 si:dkey-42l16.1 [Source:ZFIN;Acc:ZDB-GENE-050208-442]
31. CU467014.2 CU467014.2 1 0.971 - - - - - - - - 0.971
32. ATP9A ENSDARG00000115869 9 0.971 - - - - - - - - 0.971 ATPase phospholipid transporting 9A (putative) [Source:HGNC Symbol;Acc:HGNC:13540]
33. rnasel4 ENSDARG00000076983 1 0.971 - - - - - - - - 0.971 ribonuclease like 4 [Source:ZFIN;Acc:ZDB-GENE-070713-7]
34. si:dkeyp-66d7.4 si:dkeyp-66d7.4 2 0.971 - - - - - - - - 0.971
35. si:dkey-91f15.1 ENSDARG00000094990, ENSDARG00000115602 3 0.971 - - - - - - - - 0.971 si:dkey-91f15.1 [Source:ZFIN;Acc:ZDB-GENE-060601-4]
36. si:ch211-197g15.5 si:ch211-197g15.5 10 0.971 - - - - - - - - 0.971
37. CU929160.1 ENSDARG00000110056 9 0.971 - - - - - - - - 0.971
38. zgc:171704 ENSDARG00000018048 14 0.971 - - - - - - - - 0.971 zgc:171704 [Source:ZFIN;Acc:ZDB-GENE-070820-16]
39. pde4ca ENSDARG00000013221, ENSDARG00000112137 3 0.971 - - - - - - - - 0.971 phosphodiesterase 4C, cAMP-specific a [Source:ZFIN;Acc:ZDB-GENE-070912-373]
40. kcnh8 ENSDARG00000062640 10 0.971 - - - - - - - - 0.971 potassium voltage-gated channel, subfamily H (eag-related), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-204]
41. trpm3 ENSDARG00000039181 2 0.971 - - - - - - - - 0.971 transient receptor potential cation channel, subfamily M, member 3 [Source:ZFIN;Acc:ZDB-GENE-060531-95]
42. si:dkey-26g8.4 ENSDARG00000087651, ENSDARG00000095072 8 0.971 - - - - - - - - 0.971 si:dkey-26g8.4 [Source:ZFIN;Acc:ZDB-GENE-121214-36]
43. zgc:123060_1 5 0.971 - - - - - - - - 0.971 zgc:123060
44. nphs1 ENSDARG00000060758 5 0.971 - - - - - - - - 0.971 nephrosis 1, congenital, Finnish type (nephrin) [Source:ZFIN;Acc:ZDB-GENE-051102-1]
45. si:dkey-188k17.2 7 0.971 - - - - - - - - 0.971 si:dkey-188k17.2
46. abcb11a ENSDARG00000011573 190 0.971 - - - - - - - - 0.971 ATP-binding cassette, sub-family B (MDR/TAP), member 11a [Source:ZFIN;Acc:ZDB-GENE-050517-13]
47. HTRA2 HTRA2 3 0.971 - - - - - - - - 0.971
48. tcf23 ENSDARG00000087381 6 0.958 - - - - - - - - 0.958 transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
49. CABZ01080134.1 CABZ01080134.1 2 0.955 - - - - - - - - 0.955
50. neurod6b ENSDARG00000020794 164 0.955 - - - - 0.955 - - - - neuronal differentiation 6b [Source:ZFIN;Acc:ZDB-GENE-010608-2]
51. nfatc1 ENSDARG00000036168 16 0.955 - - - - - - - - 0.955 nuclear factor of activated T cells 1 [Source:ZFIN;Acc:ZDB-GENE-060503-677]
52. KIFC2 KIFC2 5 0.951 - - - - - - - - 0.951
53. BX005472.1 BX005472.1 2 0.946 - - - - 0.946 - - - -
54. CCDC178 4 0.943 - - - - 0.943 - - - - coiled-coil domain containing 178, transcript variant X3
55. si:ch211-286b5.2 ENSDARG00000096514 6 0.928 - - - - - - - - 0.928 si:ch211-286b5.2 [Source:ZFIN;Acc:ZDB-GENE-121214-251]
56. si:ch211-234c11.1 si:ch211-234c11.1 3 0.928 - - - - - - - - 0.928
57. EVI5L ENSDARG00000052766 8 0.916 - - - - - - - - 0.916 ecotropic viral integration site 5 like [Source:HGNC Symbol;Acc:HGNC:30464]
58. ODF3L2 40 0.914 - - - - - - - - 0.914 outer dense fiber of sperm tails 3-like 2
59. SCARB2 SCARB2 24 0.914 - - - - - - - - 0.914
60. CABZ01088933.1 CABZ01088933.1 40 0.91 - - - - 0.910 - - - -
61. cyp3c1l2 cyp3c1l2 53 0.904 - - - - - - - - 0.904
62. cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 0.9 - - - - 0.900 - - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
63. stx17 ENSDARG00000006869 24 0.898 - - - - - - - - 0.898 syntaxin 17 [Source:ZFIN;Acc:ZDB-GENE-041114-164]
64. ccdc64 ccdc64 2 0.894 - - - - - - - - 0.894
65. CU104697.1 CU104697.1 19 0.894 - - - - - - - - 0.894
66. zgc:162144 ENSDARG00000037603, ENSDARG00000109982 11 0.894 - - - - - - - - 0.894 zgc:162144 [Source:ZFIN;Acc:ZDB-GENE-030131-7630]
67. PHF21B ENSDARG00000109502 6 0.894 - - - - - - - - 0.894 PHD finger protein 21B [Source:HGNC Symbol;Acc:HGNC:25161]
68. UNC13A UNC13A 36 0.891 - - - - 0.891 - - - -
69. BX323876.3 BX323876.3 19 0.884 - - - - 0.884 - - - -
70. gck ENSDARG00000068006 14 0.882 - - - - - - - - 0.882 glucokinase (hexokinase 4) [Source:ZFIN;Acc:ZDB-GENE-060825-204]
71. CABZ01079551.1 CABZ01079551.1 6 0.877 - - - - 0.877 - - - -
72. btr32 ENSDARG00000053940 17 0.874 - - - - - - - - 0.874 bloodthirsty-related gene family, member 32 [Source:ZFIN;Acc:ZDB-GENE-060421-3827]
73. bon bon 20 0.869 - - - - 0.869 - - - -
74. CABZ01046283.1 CABZ01046283.1 28 0.863 - - - - - - - - 0.863
75. ddrgk1 ENSDARG00000037172 14 0.86 - - - - - - - - 0.860 DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
76. si:ch211-187f22.2 si:ch211-187f22.2 7 0.86 - - - - - - - - 0.860
77. zgc:171844 ENSDARG00000067813 30 0.858 - - - - - - - - 0.858 zgc:171844 [Source:ZFIN;Acc:ZDB-GENE-080516-8]
78. BX950188.1 ENSDARG00000044326 47 0.857 - - - - 0.857 - - - -
79. nr1d4a ENSDARG00000031161 24 0.856 - - - - 0.856 - - - - nuclear receptor subfamily 1, group D, member 4a [Source:ZFIN;Acc:ZDB-GENE-080403-5]
80. fam219b ENSDARG00000104637 3 0.856 - - - - - - - - 0.856 family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
81. si:dkeyp-27e10.7 si:dkeyp-27e10.7 5 0.849 - - - - - - - - 0.849
82. phf20a ENSDARG00000002750 90 0.841 - - - - 0.841 - - - - PHD finger protein 20, a [Source:ZFIN;Acc:ZDB-GENE-070912-270]
83. BX511266.1 BX511266.1 21 0.835 - - - - 0.835 - - - -
84. zgc:165518 ENSDARG00000075737 35 0.832 - - - - 0.832 - - - - zgc:165518 [Source:ZFIN;Acc:ZDB-GENE-070720-15]
85. soga3b ENSDARG00000075455 8 0.83 - - - - - - - - 0.830 SOGA family member 3b [Source:ZFIN;Acc:ZDB-GENE-081022-198]
86. atp2b1b ENSDARG00000007788 56 0.828 - - - - 0.828 - - - - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
87. si:dkey-21o19.6 si:dkey-21o19.6 18 0.827 - - - - - - - - 0.827
88. SYNDIG1 ENSDARG00000100751 165 0.824 - - - - 0.824 - - - - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
89. si:ch211-57i17.2 ENSDARG00000093354 58 0.822 - - - - - - - - 0.822 si:ch211-57i17.2 [Source:ZFIN;Acc:ZDB-GENE-041014-258]
90. PAK6 PAK6 5 0.822 - - - - - - - - 0.822
91. si:ch211-59m15.2 si:ch211-59m15.2 3 0.822 - - - - - - - - 0.822
92. tbx5b ENSDARG00000092060 37 0.814 - - - - 0.814 - - - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
93. si:ch211-114l13.10 25 0.813 - - - - - - - - 0.813 si:ch211-114l13.10
94. crygm2d14 ENSDARG00000087301 66 0.807 - - - - 0.807 - - - - crystallin, gamma M2d14 [Source:ZFIN;Acc:ZDB-GENE-070822-20]
95. si:ch211-191a6.3 si:ch211-191a6.3 6 0.807 - - - - 0.807 - - - -
96. sparcl1 ENSDARG00000074989 80 0.802 - - - - 0.802 - - - - SPARC-like 1 [Source:ZFIN;Acc:ZDB-GENE-060130-6]
97. ano8a ENSDARG00000076265 20 0.796 - - - - - - - - 0.796 anoctamin 8a [Source:ZFIN;Acc:ZDB-GENE-070912-583]
98. MPPED1 ENSDARG00000088181 117 0.794 - - - - 0.794 - - - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
99. zgc:165627 zgc:165627 4 0.794 - - - - - - - - 0.794
100. si:dkey-85k15.4 ENSDARG00000095047 25 0.794 - - - - - - - - 0.794 si:dkey-85k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-242]

There are 174 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA