Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkeyp-7b3.1

Gene Name Gene ID Reads Annotation
si:dkeyp-7b3.1 si:dkeyp-7b3.1 615










Genes with expression patterns similar to si:dkeyp-7b3.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkeyp-7b3.1 si:dkeyp-7b3.1 615 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. chuk ENSDARG00000011662 1668 2.385 - 0.849 - - - - 0.825 0.711 - conserved helix-loop-helix ubiquitous kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1069]
3. pcdh1b ENSDARG00000036175 101 1.763 - 0.935 - - - - - 0.828 - protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-2]
4. ppcdc ENSDARG00000033020, ENSDARG00000109858 563 1.76 - 0.900 - - - - - 0.860 - phosphopantothenoylcysteine decarboxylase [Source:ZFIN;Acc:ZDB-GENE-040426-1749]
5. gng8 ENSDARG00000042970 117 1.72 - 0.900 - - - - - 0.820 - guanine nucleotide binding protein (G protein), gamma 8 [Source:ZFIN;Acc:ZDB-GENE-050522-312]
6. CR354432.1 CR354432.1 424 1.681 - 0.890 - 0.791 - - - - -
7. TMEM208 ENSDARG00000068291 643 1.647 - 0.809 - - - - - 0.838 - transmembrane protein 208 [Source:HGNC Symbol;Acc:HGNC:25015]
8. mertk mertk 1232 1.633 - 0.883 - - - - 0.750 - -
9. FP236789.2 FP236789.2 335 1.622 0.741 0.881 - - - - - - -
10. sfmbt2 ENSDARG00000045519 251 1.62 - 0.883 - - - - - 0.737 - Scm like with four mbt domains 2 [Source:ZFIN;Acc:ZDB-GENE-041210-196]
11. C17H2orf43 C17H2orf43 379 1.612 - 0.906 - - - 0.706 - - -
12. nfkbiz ENSDARG00000102097 218 1.611 0.771 0.840 - - - - - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta [Source:ZFIN;Acc:ZDB-GENE-071024-1]
13. fdx1l 461 1.604 - 0.778 - - - - - 0.826 - ferredoxin 1-like
14. si:dkey-52l6.2 si:dkey-52l6.2 384 1.601 - - - 0.770 - - - 0.831 -
15. si:dkey-46m10.3 si:dkey-46m10.3 246 1.601 0.810 0.791 - - - - - - -
16. si:dkey-11c5.11 ENSDARG00000096637 130 1.589 - - - 0.748 - - - 0.841 - si:dkey-11c5.11 [Source:ZFIN;Acc:ZDB-GENE-121214-253]
17. pemt ENSDARG00000103614 474 1.568 0.786 0.782 - - - - - - - phosphatidylethanolamine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-719]
18. bcl2l10 ENSDARG00000026766 1426 1.563 - 0.784 - - - 0.779 - - - BCL2 like 10 [Source:ZFIN;Acc:ZDB-GENE-030825-2]
19. rbm22 ENSDARG00000010238 523 1.561 0.716 0.845 - - - - - - - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]
20. chd8 ENSDARG00000075543, ENSDARG00000111419 663 1.56 - 0.835 - 0.725 - - - - - chromodomain helicase DNA binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-030131-6320]
21. zgc:112964 ENSDARG00000101200 4751 1.557 - 0.809 - - - - - 0.748 - zgc:112964 [Source:ZFIN;Acc:ZDB-GENE-050306-47]
22. RNF4 ENSDARG00000090993 688 1.556 - 0.834 - - - - 0.722 - - ring finger protein 4 [Source:ZFIN;Acc:ZDB-GENE-041008-246]
23. MAGI3 MAGI3 114 1.554 0.720 - - - - 0.834 - - -
24. dcaf6 ENSDARG00000078311 1118 1.553 - - - - - 0.840 - 0.713 - ddb1 and cul4 associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-090206-2]
25. OSBPL3 OSBPL3 145 1.552 0.721 - - 0.831 - - - - -
26. zfx ENSDARG00000074453 453 1.55 - 0.781 - - - 0.769 - - - zinc finger protein X-linked [Source:ZFIN;Acc:ZDB-GENE-061220-2]
27. aldh3a2a ENSDARG00000028259 591 1.543 - 0.729 - - - - - 0.814 - aldehyde dehydrogenase 3 family, member A2a [Source:ZFIN;Acc:ZDB-GENE-040718-74]
28. msxd msxd 1750 1.543 0.701 0.842 - - - - - - -
29. PPP2R2B PPP2R2B 257 1.537 - - - - - 0.789 - 0.748 -
30. zgc:110269 ENSDARG00000012325 691 1.537 - 0.798 - - - - - 0.739 - zgc:110269 [Source:ZFIN;Acc:ZDB-GENE-050417-81]
31. FAM98C FAM98C 225 1.529 - 0.721 - - - - - 0.808 -
32. dynll2b ENSDARG00000005172 935 1.517 - 0.766 - - - - - 0.751 - dynein, light chain, LC8-type 2b [Source:ZFIN;Acc:ZDB-GENE-050320-132]
33. si:dkeyp-110e4.6 ENSDARG00000061845 1755 1.517 - 0.739 - - - - 0.778 - - si:dkeyp-110e4.6 [Source:ZFIN;Acc:ZDB-GENE-030219-75]
34. adhfe1 ENSDARG00000053518 499 1.512 - 0.705 - - - - - 0.807 - alcohol dehydrogenase, iron containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2070]
35. anapc15 ENSDARG00000101285 391 1.501 - - - - - 0.725 - 0.776 - anaphase promoting complex subunit 15 [Source:ZFIN;Acc:ZDB-GENE-060825-43]
36. tmem68 ENSDARG00000086737 209 1.5 0.701 - - - - - - 0.799 - transmembrane protein 68 [Source:ZFIN;Acc:ZDB-GENE-040426-1267]
37. IRS2 IRS2 485 1.498 - 0.718 - 0.780 - - - - -
38. med13a ENSDARG00000053884, ENSDARG00000112778 931 1.498 - 0.790 - - - 0.708 - - - mediator complex subunit 13a [Source:ZFIN;Acc:ZDB-GENE-070627-13]
39. syngr2a ENSDARG00000052429 3431 1.488 - 0.714 - - - - - 0.774 - synaptogyrin 2a [Source:ZFIN;Acc:ZDB-GENE-070112-1292]
40. uso1 ENSDARG00000019581 479 1.473 - 0.749 - 0.724 - - - - - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
41. trappc6bl ENSDARG00000033171, ENSDARG00000111544 911 1.45 - 0.722 - - - - 0.728 - - trafficking protein particle complex 6b-like [Source:ZFIN;Acc:ZDB-GENE-040426-1602]
42. cacng6a ENSDARG00000036457 344 1.419 0.708 - - - - - - 0.711 - calcium channel, voltage-dependent, gamma subunit 6a [Source:ZFIN;Acc:ZDB-GENE-060503-440]
43. dnajb9b ENSDARG00000016886 270 0.97 - 0.970 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 9b [Source:ZFIN;Acc:ZDB-GENE-050522-76]
44. nupl1 nupl1 1100 0.967 - 0.967 - - - - - - -
45. gramd1a ENSDARG00000076689 1148 0.963 - 0.963 - - - - - - - GRAM domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-060503-688]
46. ssh2a ENSDARG00000088440 1149 0.946 - 0.946 - - - - - - - slingshot protein phosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3810]
47. dcps ENSDARG00000009862 571 0.939 - 0.939 - - - - - - - decapping enzyme, scavenger [Source:ZFIN;Acc:ZDB-GENE-040311-1]
48. ptpn3 ENSDARG00000055784 436 0.939 - 0.939 - - - - - - - protein tyrosine phosphatase, non-receptor type 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2934]
49. kat6a ENSDARG00000018907 250 0.931 - 0.931 - - - - - - - K(lysine) acetyltransferase 6A [Source:ZFIN;Acc:ZDB-GENE-021022-3]
50. sfrp5 ENSDARG00000039041 1777 0.929 - 0.929 - - - - - - - secreted frizzled-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-011108-2]
51. kifc3 ENSDARG00000054978 1220 0.928 - 0.928 - - - - - - - kinesin family member C3 [Source:ZFIN;Acc:ZDB-GENE-030131-3724]
52. sfxn4 ENSDARG00000069832, ENSDARG00000115771 696 0.926 - - - 0.926 - - - - - sideroflexin 4 [Source:ZFIN;Acc:ZDB-GENE-050309-187]
53. cops4 ENSDARG00000043732 1508 0.925 - 0.925 - - - - - - - COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-030131-4317]
54. pcp4b 1080 0.924 - 0.924 - - - - - - - Purkinje cell protein 4b
55. abcb8 ENSDARG00000056672 589 0.922 - 0.922 - - - - - - - ATP-binding cassette, sub-family B (MDR/TAP), member 8 [Source:ZFIN;Acc:ZDB-GENE-050410-6]
56. zgc:112982 ENSDARG00000001829, ENSDARG00000110590, ENSDARG00000111057 2330 0.919 - 0.919 - - - - - - - zgc:112982 [Source:ZFIN;Acc:ZDB-GENE-050306-55]
57. tnfsf10l ENSDARG00000004196, ENSDARG00000110725 1756 0.918 - 0.918 - - - - - - - TNF superfamily member 10, like [Source:ZFIN;Acc:ZDB-GENE-010801-1]
58. map9 ENSDARG00000037276, ENSDARG00000115648 581 0.918 - 0.918 - - - - - - - microtubule-associated protein 9 [Source:ZFIN;Acc:ZDB-GENE-080225-36]
59. RBM7 ENSDARG00000020841 1203 0.918 - 0.918 - - - - - - - RNA binding motif protein 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6724]
60. ctbp2 ctbp2 3255 0.918 - 0.918 - - - - - - -
61. col12a1a ENSDARG00000078322 1833 0.917 - 0.917 - - - - - - - collagen, type XII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090728-1]
62. FBXL3 FBXL3 1769 0.915 - 0.915 - - - - - - -
63. mark2a ENSDARG00000079905 1765 0.915 - 0.915 - - - - - - - MAP/microtubule affinity-regulating kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4145]
64. yeats4 ENSDARG00000045874 1168 0.914 - 0.914 - - - - - - - YEATS domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-252]
65. znf395_1 znf395_1 342 0.914 - 0.914 - - - - - - -
66. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 0.914 - 0.914 - - - - - - - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
67. CR790363.1 ENSDARG00000097364 145 0.913 - 0.913 - - - - - - -
68. FP236168.1 FP236168.1 150 0.913 - 0.913 - - - - - - -
69. si:dkey-10g2.5 si:dkey-10g2.5 72 0.912 - 0.912 - - - - - - -
70. si:ch211-13o20.3 si:ch211-13o20.3 113 0.912 - 0.912 - - - - - - -
71. six3a ENSDARG00000058008, ENSDARG00000114971 586 0.911 - 0.911 - - - - - - - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
72. si:ch211-181d7.3 ENSDARG00000068621 87 0.911 - 0.911 - - - - - - - si:ch211-181d7.3 [Source:ZFIN;Acc:ZDB-GENE-121214-30]
73. usp10 ENSDARG00000103422 4247 0.911 - 0.911 - - - - - - - ubiquitin specific peptidase 10 [Source:ZFIN;Acc:ZDB-GENE-030219-132]
74. mogat3b ENSDARG00000003635 394 0.91 - 0.910 - - - - - - - monoacylglycerol O-acyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-110302-2]
75. CABZ01068246.1 ENSDARG00000114719 353 0.91 - 0.910 - - - - - - -
76. BX571714.2 BX571714.2 1344 0.91 - 0.910 - - - - - - -
77. xrcc5_1 ENSDARG00000099298 1533 0.91 - 0.910 - - - - - - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
78. vamp4 ENSDARG00000043510 595 0.91 - - - - - - - 0.910 - vesicle-associated membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-92]
79. casp6l1 ENSDARG00000025608, ENSDARG00000117004 107 0.909 - 0.909 - - - - - - - caspase 6, apoptosis-related cysteine peptidase, like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-48]
80. H2AFX ENSDARG00000029406 242 0.908 - 0.908 - - - - - - - H2A histone family, member X [Source:ZFIN;Acc:ZDB-GENE-040426-987]
81. si:dkeyp-52c3.2 ENSDARG00000070516 92 0.908 - 0.908 - - - - - - - si:dkeyp-52c3.2 [Source:ZFIN;Acc:ZDB-GENE-110411-46]
82. acaa1 ENSDARG00000004687 557 0.906 - 0.906 - - - - - - - acetyl-CoA acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-48]
83. BX323045.3 BX323045.3 1044 0.906 - - - 0.906 - - - - -
84. tango6 ENSDARG00000034001 203 0.905 - 0.905 - - - - - - - transport and golgi organization 6 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050419-237]
85. CU856207.1 CU856207.1 87 0.905 - - - - - - - 0.905 -
86. THEM6_1 ENSDARG00000103914 469 0.905 - 0.905 - - - - - - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
87. MYO1D ENSDARG00000036863 768 0.903 - 0.903 - - - - - - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
88. si:dkey-52k20.13 si:dkey-52k20.13 428 0.903 - 0.903 - - - - - - -
89. arhgef18b ENSDARG00000042308 298 0.903 - 0.903 - - - - - - - rho/rac guanine nucleotide exchange factor (GEF) 18b [Source:ZFIN;Acc:ZDB-GENE-070705-462]
90. kif3b ENSDARG00000101120 1158 0.903 - 0.903 - - - - - - - kinesin family member 3B [Source:ZFIN;Acc:ZDB-GENE-050119-3]
91. srfbp1 ENSDARG00000075323 2262 0.902 - 0.902 - - - - - - - serum response factor binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1991]
92. PREB ENSDARG00000101602 626 0.902 - 0.902 - - - - - - - prolactin regulatory element binding [Source:ZFIN;Acc:ZDB-GENE-040718-385]
93. klf5a 1072 0.902 - 0.902 - - - - - - - Kruppel-like factor 5a
94. itsn1 ENSDARG00000000086 684 0.902 - 0.902 - - - - - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
95. si:ch211-214e3.5 ENSDARG00000074270 755 0.902 - 0.902 - - - - - - - si:ch211-214e3.5 [Source:ZFIN;Acc:ZDB-GENE-050208-19]
96. eva1a ENSDARG00000061405 896 0.902 - - - 0.902 - - - - - eva-1 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-060929-200]
97. stk38l ENSDARG00000045482 266 0.9 - 0.900 - - - - - - - serine/threonine kinase 38 like [Source:ZFIN;Acc:ZDB-GENE-040426-798]
98. LIMA1 LIMA1 908 0.899 - - - 0.899 - - - - -
99. btbd9 ENSDARG00000068983 356 0.898 - 0.898 - - - - - - - BTB (POZ) domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040704-39]
100. rxrab ENSDARG00000035127 231 0.898 - 0.898 - - - - - - - retinoid x receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-243]

There are 1138 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA