Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkeyp-53d3.6

Gene Name Gene ID Reads Annotation
si:dkeyp-53d3.6 204 si:dkeyp-53d3.6, transcript variant X1










Genes with expression patterns similar to si:dkeyp-53d3.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkeyp-53d3.6 204 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkeyp-53d3.6, transcript variant X1
2. zgc:110353 ENSDARG00000039443 80 2.712 0.882 - 0.857 0.973 - - - - - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
3. PMFBP1 ENSDARG00000101917 292 2.44 0.849 - - - - 0.805 0.786 - - polyamine modulated factor 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-131127-619]
4. tpm4b ENSDARG00000019128 450 2.232 0.812 - - 0.705 - 0.715 - - - tropomyosin 4b [Source:ZFIN;Acc:ZDB-GENE-030131-2964]
5. dnajb9a ENSDARG00000052072 578 1.851 0.950 - - 0.901 - - - - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
6. herc3 ENSDARG00000075887 41 1.798 1.000 - 0.798 - - - - - - HECT and RLD domain containing E3 ubiquitin protein ligase 3 [Source:ZFIN;Acc:ZDB-GENE-090313-139]
7. cnot7 ENSDARG00000032116, ENSDARG00000115413 184 1.789 0.882 - - - - 0.907 - - - CCR4-NOT transcription complex, subunit 7 [Source:ZFIN;Acc:ZDB-GENE-061013-29]
8. e4f1 ENSDARG00000038243 160 1.726 - - - 0.922 - 0.804 - - - E4F transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050913-103]
9. ZNF337_20 ZNF337_20 65 1.721 0.825 - 0.896 - - - - - -
10. rhof ENSDARG00000054389, ENSDARG00000111798 15 1.719 0.882 - - - - - 0.837 - - ras homolog family member F [Source:ZFIN;Acc:ZDB-GENE-050522-280]
11. tcf23 ENSDARG00000087381 6 1.719 0.882 - - - - - 0.837 - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
12. zgc:163121 ENSDARG00000055370 110 1.719 - - 0.835 - - - 0.884 - - zgc:163121 [Source:ZFIN;Acc:ZDB-GENE-070424-80]
13. CABZ01032467.1 CABZ01032467.1 400 1.696 - - - 0.919 - - 0.777 - -
14. htr2cl1 ENSDARG00000018228, ENSDARG00000113913 131 1.691 - - - 0.909 - 0.782 - - - 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1 [Source:ZFIN;Acc:ZDB-GENE-081104-48]
15. exoc3l4 ENSDARG00000058180 923 1.69 - - - 0.887 - - 0.803 - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
16. gpib ENSDARG00000103826 19 1.681 0.842 - - - - - 0.839 - - glucose-6-phosphate isomerase b [Source:ZFIN;Acc:ZDB-GENE-020513-3]
17. rasal3 ENSDARG00000089933 17 1.679 0.882 - - - - - 0.797 - - RAS protein activator like 3 [Source:ZFIN;Acc:ZDB-GENE-101130-3]
18. pcsk7 ENSDARG00000069968 5 1.679 0.842 - - - - - 0.837 - - proprotein convertase subtilisin/kexin type 7 [Source:ZFIN;Acc:ZDB-GENE-030131-7293]
19. hcfc1a ENSDARG00000015990, ENSDARG00000111404 59 1.657 - - - - - 0.765 0.892 - - host cell factor C1a [Source:ZFIN;Acc:ZDB-GENE-030912-10]
20. rp1 ENSDARG00000077687 18 1.646 0.882 - - - - - 0.764 - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
21. rad21b ENSDARG00000035655 87 1.644 - - - - - 0.774 0.870 - - RAD21 cohesin complex component b [Source:ZFIN;Acc:ZDB-GENE-060503-223]
22. sox7 ENSDARG00000030125 806 1.64 - - - 0.887 - - 0.753 - - SRY (sex determining region Y)-box 7 [Source:ZFIN;Acc:ZDB-GENE-040109-4]
23. mlh3 ENSDARG00000056334 142 1.64 0.800 - - 0.840 - - - - - mutL homolog 3 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-060810-45]
24. tcp11l1 ENSDARG00000031890 257 1.637 0.759 - - 0.878 - - - - - t-complex 11, testis-specific-like 1 [Source:ZFIN;Acc:ZDB-GENE-050327-11]
25. stambpb ENSDARG00000086906 265 1.634 - - - 0.885 - - 0.749 - - STAM binding protein b [Source:ZFIN;Acc:ZDB-GENE-051127-31]
26. CR774186.1 CR774186.1 92 1.626 0.842 - 0.784 - - - - - -
27. tmem165 ENSDARG00000034600 1174 1.622 - - - 0.818 - 0.804 - - - transmembrane protein 165 [Source:ZFIN;Acc:ZDB-GENE-030131-3222]
28. BX649494.1 BX649494.1 195 1.619 - - 0.854 - - 0.765 - - -
29. cog8 ENSDARG00000002798 229 1.618 - 0.741 - 0.877 - - - - - component of oligomeric golgi complex 8 [Source:ZFIN;Acc:ZDB-GENE-050320-74]
30. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 1.618 0.882 - - - - - 0.736 - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
31. sigirr ENSDARG00000062204 52 1.618 - - 0.831 - - - 0.787 - - single immunoglobulin and toll-interleukin 1 receptor (TIR) domain [Source:ZFIN;Acc:ZDB-GENE-080303-3]
32. CU929133.1 CU929133.1 94 1.617 - 0.769 - - - 0.848 - - -
33. smpd5 ENSDARG00000059811, ENSDARG00000117140 60 1.614 0.837 - - - - 0.777 - - - sphingomyelin phosphodiesterase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-22]
34. si:ch211-163l21.8 ENSDARG00000042899 724 1.613 0.739 - - 0.874 - - - - - si:ch211-163l21.8 [Source:ZFIN;Acc:ZDB-GENE-041008-93]
35. bcl9l ENSDARG00000055054 128 1.609 0.882 - - - - - 0.727 - - B cell CLL/lymphoma 9-like [Source:ZFIN;Acc:ZDB-GENE-040927-29]
36. sarm1 ENSDARG00000010610 387 1.609 - - - 0.740 - 0.869 - - - sterile alpha and TIR motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040219-1]
37. CELF6 ENSDARG00000101933 228 1.605 - - - 0.881 - 0.724 - - - CUGBP Elav-like family member 6 [Source:HGNC Symbol;Acc:HGNC:14059]
38. KCTD9 KCTD9 147 1.605 - 0.849 - - - 0.756 - - -
39. rps6kal ENSDARG00000037574, ENSDARG00000115099 294 1.604 - - 0.725 - - 0.879 - - - ribosomal protein S6 kinase a, like [Source:ZFIN;Acc:ZDB-GENE-030131-9616]
40. plxnb3 ENSDARG00000032990 98 1.603 - - 0.860 - - - 0.743 - - plexin B3 [Source:ZFIN;Acc:ZDB-GENE-081104-53]
41. kitlga ENSDARG00000070917 155 1.601 - - - 0.804 - 0.797 - - - kit ligand a [Source:ZFIN;Acc:ZDB-GENE-070424-1]
42. MTERFD2 MTERFD2 140 1.6 - 0.704 - - - - 0.896 - -
43. cdk12 ENSDARG00000063726 1220 1.599 - - - 0.870 - 0.729 - - - cyclin-dependent kinase 12 [Source:ZFIN;Acc:ZDB-GENE-081104-294]
44. sgsh ENSDARG00000032087 294 1.595 - - 0.817 - - 0.778 - - - N-sulfoglucosamine sulfohydrolase (sulfamidase) [Source:ZFIN;Acc:ZDB-GENE-030131-4958]
45. morn5 ENSDARG00000033610, ENSDARG00000110509 21 1.593 0.842 - - - - - 0.751 - - MORN repeat containing 5 [Source:ZFIN;Acc:ZDB-GENE-050522-267]
46. si:dkey-68l7.1 si:dkey-68l7.1 159 1.589 - - - 0.806 - - 0.783 - -
47. cept1b ENSDARG00000021177 675 1.586 - 0.772 - - - - 0.814 - - choline/ethanolamine phosphotransferase 1b [Source:ZFIN;Acc:ZDB-GENE-071004-33]
48. CU915778.2 CU915778.2 194 1.583 0.882 - - - - - 0.701 - -
49. CU896555.1 CU896555.1 27 1.579 - 0.742 - - - - 0.837 - -
50. CR762436.4 CR762436.4 267 1.565 - - - - - 0.814 0.751 - -
51. BX004964.3 BX004964.3 87 1.564 - - 0.800 - - - 0.764 - -
52. fancd2 ENSDARG00000053574 247 1.561 0.775 - - - - 0.786 - - - FA complementation group D2 [Source:ZFIN;Acc:ZDB-GENE-040116-5]
53. st6galnac5a ENSDARG00000039220 76 1.551 0.754 - - - - 0.797 - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-070705-488]
54. dhrs1 ENSDARG00000054300, ENSDARG00000116842 555 1.549 0.741 - - - - 0.808 - - - dehydrogenase/reductase (SDR family) member 1 [Source:ZFIN;Acc:ZDB-GENE-030616-591]
55. ebag9 ENSDARG00000040021 2217 1.547 - - - 0.810 - 0.737 - - - estrogen receptor binding site associated, antigen, 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1093]
56. crmp1 ENSDARG00000056742 332 1.544 0.816 - - - - 0.728 - - - collapsin response mediator protein 1 [Source:ZFIN;Acc:ZDB-GENE-050720-1]
57. setmar ENSDARG00000074836 29 1.539 - 0.742 - - - - 0.797 - - SET domain and mariner transposase fusion gene [Source:ZFIN;Acc:ZDB-GENE-080204-61]
58. zgc:171566 ENSDARG00000105118 340 1.535 - - - - - 0.750 0.785 - - zgc:171566 [Source:ZFIN;Acc:ZDB-GENE-050309-193]
59. si:dkey-148f10.4 ENSDARG00000094627, ENSDARG00000109786 236 1.533 0.735 - - - - - 0.798 - - si:dkey-148f10.4 [Source:ZFIN;Acc:ZDB-GENE-060503-292]
60. atf5a ENSDARG00000068096 573 1.533 0.800 - - - - - 0.733 - - activating transcription factor 5a [Source:ZFIN;Acc:ZDB-GENE-060526-205]
61. SLC41A2 SLC41A2 202 1.53 - - 0.731 - - - 0.799 - -
62. pdcd2l ENSDARG00000002754 417 1.523 - - 0.742 - - 0.781 - - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
63. si:dkey-114c15.5 ENSDARG00000095150 70 1.521 0.779 - - - - 0.742 - - - si:dkey-114c15.5 [Source:ZFIN;Acc:ZDB-GENE-060531-72]
64. si:ch211-57i17.2 ENSDARG00000093354 58 1.521 0.741 - - - - - 0.780 - - si:ch211-57i17.2 [Source:ZFIN;Acc:ZDB-GENE-041014-258]
65. serpine3 ENSDARG00000057108 49 1.521 - 0.712 - - - - 0.809 - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
66. arl16 ENSDARG00000059498, ENSDARG00000110386 229 1.519 - 0.707 - - - 0.812 - - - ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]
67. si:dkey-103i16.6 ENSDARG00000062893, ENSDARG00000116729 108 1.515 - 0.740 - - - 0.775 - - - si:dkey-103i16.6 [Source:ZFIN;Acc:ZDB-GENE-061207-46]
68. si:ch211-199m9.3 50 1.509 0.753 - - - - - 0.756 - - si:ch211-199m9.3, transcript variant X3
69. kctd1 ENSDARG00000074056 652 1.508 - - - - - 0.787 0.721 - - potassium channel tetramerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040724-194]
70. BX004890.2 BX004890.2 84 1.506 0.726 - - - - 0.780 - - -
71. CR855996.2 ENSDARG00000104450 310 1.498 0.712 - - - - - 0.786 - - ATPase phospholipid transporting 8B5b [Source:NCBI gene;Acc:563450]
72. lmx1ba ENSDARG00000104815 376 1.497 - - 0.718 - - 0.779 - - - LIM homeobox transcription factor 1, beta a [Source:ZFIN;Acc:ZDB-GENE-050114-3]
73. kcnip3b ENSDARG00000017880, ENSDARG00000109763 105 1.495 - - - - - 0.773 0.722 - - Kv channel interacting protein 3b, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1752]
74. nrcam nrcam 397 1.495 - - - 0.772 - 0.723 - - -
75. trps1 ENSDARG00000104082 918 1.493 - - - - - 0.770 0.723 - - trichorhinophalangeal syndrome I [Source:ZFIN;Acc:ZDB-GENE-030131-8404]
76. si:ch211-282k23.2 ENSDARG00000093591 447 1.49 0.758 - - - - 0.732 - - - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
77. BACH1 BACH1 1021 1.489 - - - 0.719 - 0.770 - - -
78. ZCCHC2 ENSDARG00000067950 204 1.482 - 0.738 - - - 0.744 - - - zinc finger, CCHC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070912-269]
79. rgs3a ENSDARG00000099746 727 1.464 - - - 0.724 - 0.740 - - - regulator of G protein signaling 3a [Source:ZFIN;Acc:ZDB-GENE-040801-150]
80. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 1.463 - - - - - 0.749 0.714 - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
81. PEG3_40 PEG3_40 186 1.46 - - - - - 0.749 0.711 - -
82. pole ENSDARG00000058533, ENSDARG00000115430 381 1.456 - - - - - 0.742 0.714 - - polymerase (DNA directed), epsilon [Source:ZFIN;Acc:ZDB-GENE-070705-557]
83. si:ch1073-280h16.1 si:ch1073-280h16.1 229 1.454 0.749 - - - - 0.705 - - -
84. ADCYAP1R1 ADCYAP1R1 118 1.453 0.706 - - - - 0.747 - - -
85. hmp19 2554 1.446 - - 0.740 - - 0.706 - - - HMP19 protein
86. atm ENSDARG00000002385 510 1.443 - - - - - 0.728 0.715 - - ATM serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-040809-1]
87. slc45a4 ENSDARG00000077326 481 1.436 0.702 - - - - 0.734 - - - solute carrier family 45, member 4 [Source:ZFIN;Acc:ZDB-GENE-091230-5]
88. fbxo45 ENSDARG00000071492, ENSDARG00000111553 732 1.428 - - - 0.720 - 0.708 - - - F-box protein 45 [Source:ZFIN;Acc:ZDB-GENE-040426-1450]
89. ficd ENSDARG00000035595 129 1.425 0.713 - 0.712 - - - - - - FIC domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-6588]
90. hars2 hars2 1104 1.417 - - 0.706 - - 0.711 - - -
91. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.416 - - - - - 0.706 0.710 - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
92. gtf3ab ENSDARG00000071583, ENSDARG00000116242 58 0.976 - - - 0.976 - - - - - general transcription factor IIIA, b [Source:ZFIN;Acc:ZDB-GENE-030131-7698]
93. arhgap22 ENSDARG00000021255 117 0.972 - - - 0.972 - - - - - Rho GTPase activating protein 22 [Source:ZFIN;Acc:ZDB-GENE-090313-87]
94. zgc:154054 ENSDARG00000099923 19 0.971 - - - 0.971 - - - - - zgc:154054 [Source:ZFIN;Acc:ZDB-GENE-061103-283]
95. cyp2x6 ENSDARG00000079653, ENSDARG00000111425 33 0.971 - - - 0.971 - - - - - cytochrome P450, family 2, subfamily X, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-050320-144]
96. nlgn3b ENSDARG00000062376 171 0.969 - - - 0.969 - - - - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
97. GMIP ENSDARG00000077249 43 0.968 - - - 0.968 - - - - - GEM interacting protein [Source:ZFIN;Acc:ZDB-GENE-130530-823]
98. zgc:173652 22 0.968 - - - 0.968 - - - - - zgc:173652
99. si:dkeyp-117b11.2 ENSDARG00000076419 143 0.967 0.967 - - - - - - - - si:dkeyp-117b11.2 [Source:ZFIN;Acc:ZDB-GENE-081104-454]
100. zgc:172075 ENSDARG00000076146 93 0.966 - - - 0.966 - - - - - zgc:172075 [Source:ZFIN;Acc:ZDB-GENE-080215-3]

There are 1907 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA