Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkeyp-52c3.1

Gene Name Gene ID Reads Annotation
si:dkeyp-52c3.1 3 si:dkeyp-52c3.1, transcript variant X1










Genes with expression patterns similar to si:dkeyp-52c3.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkeyp-52c3.1 3 4 - - - 1.000 1.000 - - 1.000 1.000 si:dkeyp-52c3.1, transcript variant X1
2. CR450840.2 CR450840.2 1 2 - - - 1.000 - - - 1.000 -
3. si:ch211-15p9.2 ENSDARG00000062241 1 1.806 - - - 1.000 0.806 - - - - si:ch211-15p9.2 [Source:ZFIN;Acc:ZDB-GENE-060503-577]
4. CABZ01072853.1 CABZ01072853.1 35 1.753 - - - 0.947 0.806 - - - -
5. ftr64 ENSDARG00000101514 33 1.732 - - - - - - - 1.000 0.732 finTRIM family, member 64 [Source:ZFIN;Acc:ZDB-GENE-090508-8]
6. CABZ01086354.1 CABZ01086354.1 22 1.598 - - - 0.789 - - - - 0.809
7. CU468142.1 CU468142.1 6 1 - - - 1.000 - - - - -
8. zgc:158654 19 1 - - - 1.000 - - - - - zgc:158654, transcript variant X1
9. SLCO2B1 ENSDARG00000054609 0 1 - - - - - - - 1.000 - solute carrier organic anion transporter family, member 2B1 [Source:ZFIN;Acc:ZDB-GENE-051023-6]
10. NLRC5 ENSDARG00000024631 11 1 - - - - - - - 1.000 - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
11. zgc:174698_1 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 1 1 - - - - - - - 1.000 - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
12. Metazoa_SRP_4 Metazoa_SRP_4 0 1 - - - 1.000 - - - - -
13. CR626884.3 ENSDARG00000104648 1 1 - - - 1.000 - - - - -
14. ca14 ENSDARG00000061697 1 1 - - - - - - - 1.000 - carbonic anhydrase XIV [Source:ZFIN;Acc:ZDB-GENE-051030-57]
15. ighv14-1 ENSDARG00000096418 17 1 - - - 1.000 - - - - - immunoglobulin heavy variable 14-1 [Source:ZFIN;Acc:ZDB-GENE-040514-42]
16. BX571813.1 ENSDARG00000107283 0 1 - - - - - - - 1.000 -
17. cd44a ENSDARG00000087863 4 1 - - - 1.000 - - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
18. GGA3 ENSDARG00000103667 0 1 - - - - - - - 1.000 - ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
19. si:dkey-78k22.2 si:dkey-78k22.2 2 1 - - - 1.000 - - - - -
20. LRFN5 LRFN5 1 1 - - - - - - - 1.000 -
21. CU181898.1 CU181898.1 0 1 - - - 1.000 - - - - -
22. MYL2 MYL2 7 1 - - - 1.000 - - - - -
23. pde6g 8 1 - - - - - - - 1.000 - phosphodiesterase 6G, cGMP-specific, rod, gamma
24. FBXL19 FBXL19 8 1 - - - - - - - 1.000 -
25. BICD2_1 BICD2_1 18 1 - - - - - - - 1.000 -
26. BX005442.2 ENSDARG00000111949 0 1 - - - 1.000 - - - - -
27. ush1c ENSDARG00000051876, ENSDARG00000112799 25 1 - - - - 1.000 - - - - Usher syndrome 1C [Source:ZFIN;Acc:ZDB-GENE-060312-41]
28. U1_27 U1_27 0 1 - - - 1.000 - - - - -
29. zgc:110045 ENSDARG00000057141, ENSDARG00000110961 4 1 - - - - - - - 1.000 - zgc:110045 [Source:ZFIN;Acc:ZDB-GENE-050706-149]
30. si:dkey-225h23.4 si:dkey-225h23.4 7 1 - - - - - - - 1.000 -
31. pabpc1l ENSDARG00000002597, ENSDARG00000112364 3 1 - - - 1.000 - - - - - poly(A) binding protein, cytoplasmic 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-5836]
32. CABZ01077140.1 CABZ01077140.1 2 1 - - - - - - - 1.000 -
33. C10H5orf42 C10H5orf42 5 1 - - - - - - - 1.000 -
34. U1_24 U1_24 0 1 - - - 1.000 - - - - -
35. tmem244 ENSDARG00000043847 3 1 - - - - - - - 1.000 - transmembrane protein 244 [Source:ZFIN;Acc:ZDB-GENE-040724-54]
36. BX005006.2 BX005006.2 1 1 - - - - - - - 1.000 -
37. FMNL1 FMNL1 7 1 - - - 1.000 - - - - -
38. GM2A ENSDARG00000088439 55 1 - - - 1.000 - - - - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
39. trim35-31 ENSDARG00000052097, ENSDARG00000111232 0 1 - - - - - - - 1.000 - tripartite motif containing 35-31 [Source:ZFIN;Acc:ZDB-GENE-061009-3]
40. si:dkey-111b14.1 si:dkey-111b14.1 3 1 - - - 1.000 - - - - -
41. top3b ENSDARG00000027586 8 1 - - - 1.000 - - - - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
42. dicp1.1 ENSDARG00000091993, ENSDARG00000111013, ENSDARG00000114814 2 1 - - - - - - - 1.000 - diverse immunoglobulin domain-containing protein 1.1 [Source:ZFIN;Acc:ZDB-GENE-120305-1]
43. hyal6 ENSDARG00000038166, ENSDARG00000111343 2 1 - - - 1.000 - - - - - hyaluronoglucosaminidase 6 [Source:ZFIN;Acc:ZDB-GENE-070112-2372]
44. BX005421.6 BX005421.6 4 1 - - - 1.000 - - - - -
45. si:dkey-118j18.3 si:dkey-118j18.3 4 1 - - - - - - - 1.000 -
46. mfsd12b 8 1 - - - - - - - - 1.000 major facilitator superfamily domain containing 12b
47. si:ch211-14a17.7 ENSDARG00000038720, ENSDARG00000115206 1 1 - - - 1.000 - - - - - si:ch211-14a17.7 [Source:ZFIN;Acc:ZDB-GENE-030616-590]
48. ipp ENSDARG00000075339 3 1 - - - - - - - 1.000 - intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]
49. dcst2 ENSDARG00000088693 1 1 - - - 1.000 - - - - - DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
50. FNDC3A ENSDARG00000105503 11 1 - - - - - - - 1.000 - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
51. bard1 ENSDARG00000076733 40 1 - - - 1.000 - - - - - BRCA1 associated RING domain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5883]
52. phc3 ENSDARG00000074604 2 1 - - - - - - - 1.000 - polyhomeotic homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-369]
53. arhgap23b ENSDARG00000026840 6 1 - - - 1.000 - - - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
54. mtp 1 1 - - - 1.000 - - - - - microsomal triglyceride transfer protein
55. zgc:114037_5 6 1 - - - 1.000 - - - - - zgc:114037
56. ASCC3 ENSDARG00000086678 1 1 - - - - - - - 1.000 - activating signal cointegrator 1 complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-130214-2]
57. BX321875.3 ENSDARG00000112569 24 1 - - - 1.000 - - - - -
58. CABZ01060030.1 ENSDARG00000106579 55 1 - - - 1.000 - - - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
59. guca1c ENSDARG00000030758 9 1 - - - 1.000 - - - - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
60. RP1L1 RP1L1 15 1 - - - - - - - 1.000 -
61. mcf2b ENSDARG00000056603, ENSDARG00000097371 1 1 - - - - - - - 1.000 - MCF.2 cell line derived transforming sequence b [Source:ZFIN;Acc:ZDB-GENE-091118-4]
62. nt5dc1 ENSDARG00000006797 3 1 - - - - - - - 1.000 - 5'-nucleotidase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8274]
63. si:ch211-198o19.2 si:ch211-198o19.2 0 1 - - - 1.000 - - - - -
64. gpr155a ENSDARG00000090804 27 1 - - - 1.000 - - - - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
65. inpp5k inpp5k 2 1 - - - 1.000 - - - - -
66. U5_3 U5_3 3 1 - - - - - - - 1.000 -
67. si:ch211-264f5.5 si:ch211-264f5.5 2 1 - - - - - - - 1.000 -
68. 5S_rRNA_15 5S_rRNA_15 9 1 - - - - 1.000 - - - -
69. ONECUT2 ENSDARG00000090387 8 1 - - - 1.000 - - - - - one cut homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-120215-73]
70. BX927308.3 BX927308.3 126 1 - - - - - - - 1.000 -
71. ryr2b ENSDARG00000003706 6 1 - - - 1.000 - - - - - ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
72. ENSDARG00000086339 ENSDARG00000086339 1 1 - - - - - - - 1.000 -
73. COL26A1 COL26A1 9 1 - - - - - - - 1.000 -
74. zgc:113295 ENSDARG00000074768, ENSDARG00000103947 36 1 - - - - - - - 1.000 - zgc:113295 [Source:ZFIN;Acc:ZDB-GENE-050320-122]
75. tlr5a ENSDARG00000044415 3 1 - - - 1.000 - - - - - toll-like receptor 5a [Source:ZFIN;Acc:ZDB-GENE-040219-14]
76. hcrt ENSDARG00000070932 4 1 - - - 1.000 - - - - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
77. DTWD2 ENSDARG00000101873 1 1 - - - - - - - 1.000 - DTW domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120215-183]
78. BX649394.1 BX649394.1 1 1 - - - - - - - 1.000 -
79. FBXO15 ENSDARG00000016897 4 1 - - - 1.000 - - - - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
80. si:dkey-164n2.1 47 1 - - - - - - - 1.000 - si:dkey-164n2.1, transcript variant X1
81. SSTR2 SSTR2 12 1 - - - 1.000 - - - - -
82. BX649314.1 BX649314.1 3 1 - - - - - - - 1.000 -
83. U1_43 U1_43 0 1 - - - 1.000 - - - - -
84. BX465203.1 ENSDARG00000113985 8 1 - - - 1.000 - - - - -
85. TRAF2 TRAF2 13 1 - - - 1.000 - - - - -
86. si:ch211-12e13.12 ENSDARG00000094737 1 1 - - - - - - - 1.000 - si:ch211-12e13.12 [Source:ZFIN;Acc:ZDB-GENE-070424-121]
87. CREBBP CREBBP 8 1 - - - 1.000 - - - - -
88. cx52.9 ENSDARG00000086453 7 1 - - - - - - - 1.000 - connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
89. m17 ENSDARG00000035435 28 1 - - - - - - - 1.000 - IL-6 subfamily cytokine M17 [Source:ZFIN;Acc:ZDB-GENE-060526-368]
90. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - - - 1.000 - - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
91. si:dkeyp-69b9.2 si:dkeyp-69b9.2 25 1 - - - 1.000 - - - - -
92. ZNF337_19 ZNF337_19 3 1 - - - - 1.000 - - - -
93. si:ch211-202n12.5 si:ch211-202n12.5 19 1 - - - - - - - 1.000 -
94. si:dkey-201i6.5 si:dkey-201i6.5 3 1 - - - - - - - 1.000 -
95. SGSM1_1 SGSM1_1 40 1 - - - 1.000 - - - - -
96. si:dkey-233e3.6 si:dkey-233e3.6 1 1 - - - - - - - 1.000 -
97. mcm5_1 ENSDARG00000019507 10 1 - - - 1.000 - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
98. kitb ENSDARG00000056133, ENSDARG00000113747 10 1 - - - - - - - 1.000 - v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050916-2]
99. si:ch73-21k16.5 ENSDARG00000078770 7 1 - - - 1.000 - - - - - si:ch73-21k16.5 [Source:ZFIN;Acc:ZDB-GENE-030131-8374]
100. si:dkey-70p6.1 ENSDARG00000092039, ENSDARG00000114631 19 1 - - - 1.000 - - - - - si:dkey-70p6.1 [Source:ZFIN;Acc:ZDB-GENE-040724-140]

There are 277 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA