Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-56m15.4

Gene Name Gene ID Reads Annotation
si:dkey-56m15.4 si:dkey-56m15.4 39










Genes with expression patterns similar to si:dkey-56m15.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-56m15.4 si:dkey-56m15.4 39 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000
2. BX914198.1 BX914198.1 5 2 1.000 - - - - - - 1.000 -
3. PGBD4 ENSDARG00000079328 20 2 1.000 1.000 - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
4. CABZ01065506.1 CABZ01065506.1 204 2 1.000 1.000 - - - - - - -
5. lppr5b lppr5b 23 2 1.000 1.000 - - - - - - -
6. si:ch211-10j20.7 si:ch211-10j20.7 8 2 1.000 1.000 - - - - - - -
7. BX548021.2 BX548021.2 4 2 1.000 1.000 - - - - - - -
8. si:dkey-191j3.2 ENSDARG00000101997 1 2 - 1.000 - - - - - 1.000 - si:dkey-191j3.2 [Source:ZFIN;Acc:ZDB-GENE-081103-55]
9. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 2 1.000 1.000 - - - - - - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
10. si:dkey-4j21.1 17 2 1.000 1.000 - - - - - - - si:dkey-4j21.1, transcript variant X2
11. NPBWR2 NPBWR2 132 1.935 1.000 - - - - - 0.935 - -
12. helt ENSDARG00000056400 482 1.896 1.000 0.896 - - - - - - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
13. cnn1b ENSDARG00000102398 40 1.883 1.000 0.883 - - - - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
14. PPFIA3 ENSDARG00000077053 310 1.879 0.879 1.000 - - - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
15. TENM2 ENSDARG00000037122 48 1.878 0.878 1.000 - - - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
16. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1.874 0.874 1.000 - - - - - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
17. XKR7 ENSDARG00000026333 175 1.856 0.856 1.000 - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
18. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1.854 0.854 1.000 - - - - - - - shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
19. si:dkey-11c5.14 si:dkey-11c5.14 15 1.845 - 1.000 - 0.845 - - - - -
20. fubp3 ENSDARG00000086896 21 1.823 - - - - - - 0.976 0.847 - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
21. GADD45G GADD45G 382 1.813 0.813 1.000 - - - - - - -
22. dio3a 19 1.793 0.850 - - - - - - 0.943 - deiodinase, iodothyronine, type IIIa
23. lpar6b ENSDARG00000069441 65 1.792 - 0.819 - - - - 0.973 - - lysophosphatidic acid receptor 6b [Source:ZFIN;Acc:ZDB-GENE-110408-67]
24. zgc:194665 ENSDARG00000004577 136 1.783 0.783 1.000 - - - - - - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
25. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1.772 - 1.000 - 0.772 - - - - - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
26. arl8 ENSDARG00000094709 6 1.766 - 1.000 - - - - - 0.766 - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
27. gpr22 gpr22 115 1.766 0.766 1.000 - - - - - - -
28. si:dkey-200l5.4 ENSDARG00000095294 13 1.764 1.000 - - 0.764 - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
29. scin ENSDARG00000010728, ENSDARG00000111092 437 1.752 0.752 1.000 - - - - - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
30. CSMD1 CSMD1 15 1.731 1.000 0.731 - - - - - - -
31. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.73 0.730 1.000 - - - - - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
32. AKIP1 ENSDARG00000069037, ENSDARG00000111207, ENSDARG00000115020 351 1.718 0.872 - - - - - 0.846 - - A kinase (PRKA) interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030829-24]
33. rtn4r ENSDARG00000090035 46 1.709 1.000 0.709 - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
34. ptprc ENSDARG00000071437 104 1.704 1.000 0.704 - - - - - - - protein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]
35. CABZ01029822.1 ENSDARG00000086931 1654 1.679 0.883 0.796 - - - - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
36. cnih3 ENSDARG00000014953 25 1.67 0.939 0.731 - - - - - - - cornichon family AMPA receptor auxiliary protein 3 [Source:ZFIN;Acc:ZDB-GENE-041001-180]
37. alkbh6 ENSDARG00000077253 117 1.668 0.786 - - - - - 0.882 - - alkB homolog 6 [Source:ZFIN;Acc:ZDB-GENE-060407-1]
38. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.648 0.826 0.822 - - - - - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
39. si:dkey-4c15.16 ENSDARG00000097261 154 1.643 - - - - - - 0.927 - 0.716 si:dkey-4c15.16 [Source:ZFIN;Acc:ZDB-GENE-050420-215]
40. pgls ENSDARG00000021233 264 1.619 - 0.709 - - - - 0.910 - - 6-phosphogluconolactonase [Source:ZFIN;Acc:ZDB-GENE-040822-9]
41. grnas ENSDARG00000091885 71 1.583 - 0.731 - - - - - 0.852 - granulin antisense [Source:ZFIN;Acc:ZDB-GENE-060104-1]
42. zswim7 ENSDARG00000067608 179 1.583 - 0.713 - - - - 0.870 - - zinc finger, SWIM-type containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-4255]
43. EIF4G3 EIF4G3 24 1.582 - 0.713 - - - - - 0.869 -
44. FAM69A FAM69A 28 1.535 - 0.713 - 0.822 - - - - -
45. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.506 0.752 0.754 - - - - - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
46. cnr1 ENSDARG00000009020 33 1.506 0.802 - - 0.704 - - - - - cannabinoid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040312-3]
47. atp2b3b ENSDARG00000023445 1424 1.503 0.787 0.716 - - - - - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
48. syngr3b ENSDARG00000025034 290 1.44 0.721 0.719 - - - - - - - synaptogyrin 3b [Source:ZFIN;Acc:ZDB-GENE-070822-6]
49. dsel dsel 96 1.424 - 0.711 - 0.713 - - - - -
50. pdp2 ENSDARG00000058571, ENSDARG00000115915 464 1.424 - 0.710 - - - - 0.714 - - putative pyruvate dehydrogenase phosphatase isoenzyme 2 [Source:ZFIN;Acc:ZDB-GENE-000921-2]
51. LRRC4C ENSDARG00000113411 36 1 1.000 - - - - - - - - leucine rich repeat containing 4C [Source:ZFIN;Acc:ZDB-GENE-050522-533]
52. rbm10 ENSDARG00000077400 1 1 1.000 - - - - - - - - RNA binding motif protein 10 [Source:ZFIN;Acc:ZDB-GENE-100922-245]
53. klhl6 ENSDARG00000026990 24 1 - 1.000 - - - - - - - kelch-like family member 6 [Source:ZFIN;Acc:ZDB-GENE-030616-325]
54. thada ENSDARG00000053082, ENSDARG00000112761 2 1 - 1.000 - - - - - - - thyroid adenoma associated [Source:ZFIN;Acc:ZDB-GENE-050320-49]
55. syt9a ENSDARG00000003994 298 1 - 1.000 - - - - - - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
56. si:ch73-91k6.8 si:ch73-91k6.8 37 1 - 1.000 - - - - - - -
57. ZNF337_9 ZNF337_9 18 1 1.000 - - - - - - - -
58. igsf21b ENSDARG00000056084 6 1 - 1.000 - - - - - - - immunoglobin superfamily, member 21b [Source:ZFIN;Acc:ZDB-GENE-070424-59]
59. pcsk5a ENSDARG00000067537 44 1 - 1.000 - - - - - - - proprotein convertase subtilisin/kexin type 5a [Source:ZFIN;Acc:ZDB-GENE-060531-130]
60. RGS9BP ENSDARG00000086756 65 1 - 1.000 - - - - - - - regulator of G protein signaling 9 binding protein [Source:HGNC Symbol;Acc:HGNC:30304]
61. CU570691.1 ENSDARG00000088908 5 1 1.000 - - - - - - - -
62. dync1i2b ENSDARG00000103195 46 1 1.000 - - - - - - - - dynein, cytoplasmic 1, intermediate chain 2b [Source:ZFIN;Acc:ZDB-GENE-090121-1]
63. C13H10orf53 C13H10orf53 3 1 1.000 - - - - - - - -
64. gdf10a ENSDARG00000095378 12 1 - 1.000 - - - - - - - growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
65. BX957278.1_1 ENSDARG00000010940 9 1 - - - - - - - 1.000 -
66. si:ch211-232k18.2 si:ch211-232k18.2 2 1 - 1.000 - - - - - - -
67. MSRA ENSDARG00000029587 30 1 - 1.000 - - - - - - - methionine sulfoxide reductase A [Source:ZFIN;Acc:ZDB-GENE-041014-344]
68. evlb ENSDARG00000099720 245 1 - 1.000 - - - - - - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
69. ftr76 ENSDARG00000076093 1 1 - 1.000 - - - - - - - finTRIM family, member 76 [Source:ZFIN;Acc:ZDB-GENE-090508-15]
70. si:dkey-17e6.2 si:dkey-17e6.2 72 1 1.000 - - - - - - - -
71. CLDN20 26 1 1.000 - - - - - - - - claudin 20, transcript variant X2
72. ME1 ENSDARG00000053215 8 1 - 1.000 - - - - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
73. rab14l ENSDARG00000035188 18 1 - 1.000 - - - - - - - RAB14, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-040426-1207]
74. VASH1 ENSDARG00000092716 33 1 1.000 - - - - - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
75. CR762480.3 CR762480.3 3 1 - 1.000 - - - - - - -
76. nosip ENSDARG00000037958, ENSDARG00000112335 59 1 1.000 - - - - - - - - nitric oxide synthase interacting protein [Source:ZFIN;Acc:ZDB-GENE-041114-146]
77. zgc:174356 ENSDARG00000088263, ENSDARG00000116818 6 1 - 1.000 - - - - - - - zgc:174356 [Source:ZFIN;Acc:ZDB-GENE-080215-21]
78. grik5 ENSDARG00000101449, ENSDARG00000111384 75 1 1.000 - - - - - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
79. nitr3a_1 ENSDARG00000110676 44 1 - 1.000 - - - - - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
80. KCNJ2 KCNJ2 1 1 - - - - - - - 1.000 -
81. TRIM14_4 TRIM14_4 2 1 1.000 - - - - - - - -
82. BEGAIN BEGAIN 39 1 1.000 - - - - - - - -
83. zgc:77112 ENSDARG00000015657 24 1 - 1.000 - - - - - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
84. si:dkey-150k17.3 33 1 1.000 - - - - - - - - si:dkey-150k17.3
85. BX470131.1 BX470131.1 86 1 1.000 - - - - - - - -
86. zgc:113210 ENSDARG00000002872 99 1 1.000 - - - - - - - - zgc:113210 [Source:ZFIN;Acc:ZDB-GENE-050320-83]
87. si:dkeyp-85d8.3 si:dkeyp-85d8.3 0 1 - 1.000 - - - - - - -
88. si:dkeyp-33c10.5 11 1 - 1.000 - - - - - - - si:dkeyp-33c10.5, transcript variant X2
89. SGSM1 SGSM1 254 1 - 1.000 - - - - - - -
90. ppp1r3db ENSDARG00000076248 32 1 - 1.000 - - - - - - - protein phosphatase 1, regulatory subunit 3Db [Source:ZFIN;Acc:ZDB-GENE-110201-1]
91. camta1a ENSDARG00000077428, ENSDARG00000116922 176 1 - 1.000 - - - - - - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
92. zgc:153039 ENSDARG00000102724 4 1 1.000 - - - - - - - - zgc:153039 [Source:ZFIN;Acc:ZDB-GENE-060929-736]
93. GRIK1 GRIK1 1 1 - 1.000 - - - - - - -
94. BX936303.1 ENSDARG00000103105 26 1 - 1.000 - - - - - - -
95. si:dkey-103i16.2 si:dkey-103i16.2 492 1 - 1.000 - - - - - - -
96. ccdc64 ccdc64 2 1 - 1.000 - - - - - - -
97. si:dkey-228i19.32 si:dkey-228i19.32 9 1 1.000 - - - - - - - -
98. si:dkey-3d4.1 si:dkey-3d4.1 37 1 - 1.000 - - - - - - -
99. lepa ENSDARG00000091085 11 1 - 1.000 - - - - - - - leptin a [Source:ZFIN;Acc:ZDB-GENE-081001-1]
100. nyx ENSDARG00000061791 2 1 - 1.000 - - - - - - - nyctalopin [Source:ZFIN;Acc:ZDB-GENE-061026-3]

There are 1500 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA