Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-3p4.8

Gene Name Gene ID Reads Annotation
si:dkey-3p4.8 ENSDARG00000114124 82 si:dkey-3p4.8 [Source:ZFIN;Acc:ZDB-GENE-120215-16]










Genes with expression patterns similar to si:dkey-3p4.8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-3p4.8 ENSDARG00000114124 82 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-3p4.8 [Source:ZFIN;Acc:ZDB-GENE-120215-16]
2. fbxw9 ENSDARG00000058020 28 1.837 - 0.837 - - - - 1.000 - - F-box and WD repeat domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-091204-198]
3. fancg ENSDARG00000024967, ENSDARG00000113462 82 1.768 - - - 0.768 - - 1.000 - - FA complementation group G [Source:ZFIN;Acc:ZDB-GENE-050417-103]
4. si:dkey-238o14.8 si:dkey-238o14.8 32 1.71 - 0.833 - 0.877 - - - - -
5. klhl24 klhl24 40 1.666 - 0.836 - 0.830 - - - - -
6. tlr7 ENSDARG00000068812, ENSDARG00000075685 30 1.66 - 0.792 - 0.868 - - - - - toll-like receptor 7 [Source:ZFIN;Acc:ZDB-GENE-040219-11]
7. b3galtlb b3galtlb 27 1.628 - 0.792 - - - - 0.836 - -
8. CU424462.2 CU424462.2 73 1.59 - - - 0.858 - 0.732 - - -
9. AL844186.1 ENSDARG00000114351 41 1.581 0.785 - - 0.796 - - - - -
10. ripply2 ENSDARG00000070535 18 1.58 - 0.744 - - - - 0.836 - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
11. pdpk1a ENSDARG00000062304 213 1.576 0.821 0.755 - - - - - - - 3-phosphoinositide dependent protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-109]
12. lyst ENSDARG00000008575, ENSDARG00000113634 55 1.568 - 0.792 - - - 0.776 - - - lysosomal trafficking regulator [Source:ZFIN;Acc:ZDB-GENE-070702-1]
13. SUSD3 SUSD3 64 1.563 - - - - - 0.831 0.732 - -
14. RNF39 RNF39 52 1.52 - 0.744 - - - 0.776 - - -
15. si:ch73-256j6.5 ENSDARG00000092732 65 1.504 - 0.802 - - - - 0.702 - - si:ch73-256j6.5 [Source:ZFIN;Acc:ZDB-GENE-070705-225]
16. TLN2 TLN2 359 1.48 - 0.707 - - - - 0.773 - -
17. trim8a ENSDARG00000090512 228 1.465 0.709 - - 0.756 - - - - - tripartite motif containing 8a [Source:ZFIN;Acc:ZDB-GENE-130107-1]
18. NF1 NF1 62 1 - - - - - 1.000 - - -
19. CABZ01016604.1 CABZ01016604.1 12 1 - - - - - - 1.000 - -
20. morn4 ENSDARG00000039062 145 1 - - - - - - 1.000 - - MORN repeat containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-7]
21. si:ch211-132g1.6 ENSDARG00000093102 13 1 - - - - - - 1.000 - - si:ch211-132g1.6 [Source:ZFIN;Acc:ZDB-GENE-091204-469]
22. dclre1a ENSDARG00000091768 94 1 - - - - - 1.000 - - - DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-124]
23. si:dkey-19f21.8 si:dkey-19f21.8 12 1 - - - - - - 1.000 - -
24. FAM184A ENSDARG00000014081 34 1 - - - - - - 1.000 - - family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
25. BX004785.5 BX004785.5 35 1 - - - - - - 1.000 - -
26. METTL15 ENSDARG00000089236 39 1 - - - - - - 1.000 - - methyltransferase like 15 [Source:ZFIN;Acc:ZDB-GENE-130530-958]
27. syk ENSDARG00000008186 24 0.966 - - - - - - 0.966 - - spleen tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-040702-3]
28. znf687b ENSDARG00000019299 71 0.966 - - - - - - 0.966 - - zinc finger protein 687b [Source:ZFIN;Acc:ZDB-GENE-041111-214]
29. MEOX2 MEOX2 63 0.951 - - - - - - 0.951 - -
30. ift80 ENSDARG00000038879 283 0.949 - - - - - 0.949 - - - intraflagellar transport 80 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-041212-50]
31. pus3 ENSDARG00000028976 52 0.937 - - - - - 0.937 - - - pseudouridylate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9433]
32. wars2 ENSDARG00000011801 134 0.928 - 0.928 - - - - - - - tryptophanyl tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050306-26]
33. si:ch211-197n1.2 58 0.927 - - - - - 0.927 - - - si:ch211-197n1.2, transcript variant X1
34. LRCH4 ENSDARG00000068258 22 0.914 - - - 0.914 - - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
35. si:dkey-205h13.2 ENSDARG00000089429 71 0.91 - - - 0.910 - - - - - si:dkey-205h13.2 [Source:ZFIN;Acc:ZDB-GENE-080225-18]
36. LRAT LRAT 12 0.9 - - - 0.900 - - - - -
37. gpn2_1 ENSDARG00000103127 14 0.896 - - - 0.896 - - - - - GPN-loop GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-86]
38. BX005410.2 BX005410.2 44 0.896 - - - - - 0.896 - - -
39. si:dkey-14o18.3 si:dkey-14o18.3 5 0.896 - - - 0.896 - - - - -
40. fgf8b ENSDARG00000039615 29 0.893 - - - 0.893 - - - - - fibroblast growth factor 8 b [Source:ZFIN;Acc:ZDB-GENE-010122-1]
41. SLC39A8 ENSDARG00000056757 52 0.891 - 0.891 - - - - - - - solute carrier family 39 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-050419-124]
42. SYNDIG1 ENSDARG00000100751 165 0.891 - - - - - - 0.891 - - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
43. kcnk9 ENSDARG00000104563 92 0.89 - - - - - - 0.890 - - potassium channel, subfamily K, member 9 [Source:ZFIN;Acc:ZDB-GENE-070705-260]
44. si:ch211-202h22.7 ENSDARG00000073912 18 0.883 - - - 0.883 - - - - - si:ch211-202h22.7 [Source:ZFIN;Acc:ZDB-GENE-090313-77]
45. RBBP6_11 RBBP6_11 6 0.882 - - - 0.882 - - - - -
46. Mar-11 Mar-11 5 0.882 - - - 0.882 - - - - -
47. cbln12 ENSDARG00000068232 4 0.882 - - - 0.882 - - - - - cerebellin 12 [Source:ZFIN;Acc:ZDB-GENE-070912-11]
48. slc35c1 ENSDARG00000104669 65 0.882 - - - 0.882 - - - - - solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
49. CCDC132 CCDC132 267 0.882 - - - - - - 0.882 - -
50. sbno2a ENSDARG00000098801 40 0.882 - - - 0.882 - - - - - strawberry notch homolog 2a [Source:ZFIN;Acc:ZDB-GENE-100629-3]
51. zgc:113090 ENSDARG00000053260, ENSDARG00000110502, ENSDARG00000115912 9 0.882 - - - 0.882 - - - - - zgc:113090 [Source:ZFIN;Acc:ZDB-GENE-050522-532]
52. CU695222.1 ENSDARG00000097132 4 0.882 - - - 0.882 - - - - -
53. si:dkey-14d8.19 si:dkey-14d8.19 12 0.882 - - - 0.882 - - - - -
54. acsm3 ENSDARG00000004880 165 0.881 - - - - - 0.881 - - - acyl-CoA synthetase medium chain family member 3 [Source:ZFIN;Acc:ZDB-GENE-080220-22]
55. star ENSDARG00000006137 149 0.878 - - - - - 0.878 - - - steroidogenic acute regulatory protein [Source:ZFIN;Acc:ZDB-GENE-001120-3]
56. CU234171.2 CU234171.2 86 0.877 - - - 0.877 - - - - -
57. hhat ENSDARG00000074428 8 0.875 - - - 0.875 - - - - - hedgehog acyltransferase [Source:ZFIN;Acc:ZDB-GENE-051118-1]
58. bicc1b ENSDARG00000070497 406 0.869 - 0.869 - - - - - - - BicC family RNA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-080522-3]
59. zrsr2 ENSDARG00000058448 335 0.869 - - - - - 0.869 - - - zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1495]
60. pcsk5a ENSDARG00000067537 44 0.868 - - - 0.868 - - - - - proprotein convertase subtilisin/kexin type 5a [Source:ZFIN;Acc:ZDB-GENE-060531-130]
61. IGSF10 ENSDARG00000077497 317 0.867 - 0.867 - - - - - - - immunoglobulin superfamily, member 10 [Source:ZFIN;Acc:ZDB-GENE-130530-827]
62. CABZ01087111.1 CABZ01087111.1 42 0.866 - - - 0.866 - - - - -
63. si:ch211-113a14.17 15 0.866 - - - 0.866 - - - - - si:ch211-113a14.17
64. acot8 ENSDARG00000014138 89 0.865 - 0.865 - - - - - - - acyl-CoA thioesterase 8 [Source:ZFIN;Acc:ZDB-GENE-041010-174]
65. arsk ENSDARG00000059714, ENSDARG00000115105 31 0.863 - - - 0.863 - - - - - arylsulfatase family, member K [Source:ZFIN;Acc:ZDB-GENE-060929-332]
66. hes2.2 ENSDARG00000068168 197 0.863 - - - - - - 0.863 - - hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
67. si:ch211-141e20.2 ENSDARG00000093349 61 0.862 - - - 0.862 - - - - - si:ch211-141e20.2 [Source:ZFIN;Acc:ZDB-GENE-070912-75]
68. rcor3 ENSDARG00000004502 680 0.862 - - - 0.862 - - - - - REST corepressor 3 [Source:ZFIN;Acc:ZDB-GENE-050208-371]
69. irg1 22 0.861 - - - 0.861 - - - - - immunoresponsive 1 homolog (mouse)
70. C5H2orf42 C5H2orf42 65 0.858 - 0.858 - - - - - - -
71. dre-mir-126b ENSDARG00000098981 40 0.858 - - - 0.858 - - - - - dre-mir-126b [Source:miRBase;Acc:MI0010848]
72. si:dkey-22i16.3 34 0.857 - 0.857 - - - - - - - si:dkey-22i16.3
73. tk2 ENSDARG00000046127, ENSDARG00000111531 204 0.856 - 0.856 - - - - - - - thymidine kinase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-243]
74. FBLN7 ENSDARG00000089519 4 0.856 - - - - - - 0.856 - - fibulin 7 [Source:ZFIN;Acc:ZDB-GENE-170130-2]
75. lypla1 ENSDARG00000104228 185 0.856 - 0.856 - - - - - - - lysophospholipase I [Source:ZFIN;Acc:ZDB-GENE-050417-87]
76. BX664752.1 BX664752.1 64 0.856 - - - - - - 0.856 - -
77. irak1bp1 ENSDARG00000036903, ENSDARG00000110205 426 0.856 - 0.856 - - - - - - - interleukin-1 receptor-associated kinase 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-272]
78. ENSDARG00000029117 ENSDARG00000029117 80 0.855 - - - 0.855 - - - - -
79. SBK1 SBK1 154 0.855 - - - - - - 0.855 - -
80. pole2 ENSDARG00000100028 42 0.855 - - - 0.855 - - - - - polymerase (DNA directed), epsilon 2 [Source:ZFIN;Acc:ZDB-GENE-020419-16]
81. tnfrsf9a ENSDARG00000060498, ENSDARG00000116466 679 0.854 - - - - - - 0.854 - - tumor necrosis factor receptor superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060421-8213]
82. gas6 ENSDARG00000007804 405 0.854 - 0.854 - - - - - - - growth arrest-specific 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7773]
83. SMC6 ENSDARG00000091821 165 0.851 - 0.851 - - - - - - - structural maintenance of chromosomes 6 [Source:ZFIN;Acc:ZDB-GENE-110303-1]
84. fancc ENSDARG00000055232, ENSDARG00000116499 50 0.851 - - - - - - 0.851 - - FA complementation group C [Source:ZFIN;Acc:ZDB-GENE-060510-2]
85. ncbp2 ENSDARG00000014898 232 0.848 - 0.848 - - - - - - - nuclear cap binding protein subunit 2 [Source:ZFIN;Acc:ZDB-GENE-020419-31]
86. rnf152 ENSDARG00000087782 141 0.848 - - - 0.848 - - - - - ring finger protein 152 [Source:ZFIN;Acc:ZDB-GENE-050327-84]
87. CABZ01092943.1 CABZ01092943.1 29 0.846 - 0.846 - - - - - - -
88. CR318603.2 ENSDARG00000105536 199 0.846 - 0.846 - - - - - - -
89. zgc:66313 ENSDARG00000030357 45 0.846 - 0.846 - - - - - - - zgc:66313 [Source:ZFIN;Acc:ZDB-GENE-040426-1606]
90. ENSDARG00000095340 ENSDARG00000095340 8 0.846 - 0.846 - - - - - - -
91. mgat2 ENSDARG00000052408 264 0.845 - - - 0.845 - - - - - mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-070410-54]
92. PPP2R2A PPP2R2A 50 0.843 - - - 0.843 - - - - -
93. JTB ENSDARG00000070150 135 0.842 - - - - - - 0.842 - - jumping translocation breakpoint [Source:ZFIN;Acc:ZDB-GENE-060503-674]
94. si:ch211-215p11.4 si:ch211-215p11.4 67 0.842 - 0.842 - - - - - - -
95. ZNF337_7 ZNF337_7 198 0.841 - 0.841 - - - - - - -
96. HIP1R_1 HIP1R_1 129 0.839 - 0.839 - - - - - - -
97. ago4 ENSDARG00000100854 496 0.839 - - - 0.839 - - - - - argonaute RISC catalytic component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5357]
98. SDR42E2 ENSDARG00000059914 132 0.838 - - - 0.838 - - - - - short chain dehydrogenase/reductase family 42E, member 2 [Source:ZFIN;Acc:ZDB-GENE-101203-3]
99. her3 ENSDARG00000076857 131 0.838 - - - 0.838 - - - - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
100. fgf6a ENSDARG00000009351 799 0.838 - 0.838 - - - - - - - fibroblast growth factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-559]

There are 629 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA