Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-3p4.4

Gene Name Gene ID Reads Annotation
si:dkey-3p4.4 si:dkey-3p4.4 2










Genes with expression patterns similar to si:dkey-3p4.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-3p4.4 si:dkey-3p4.4 2 4 - - 1.000 1.000 - - - 1.000 1.000
2. zgc:194418 ENSDARG00000111790 1 2 - - - - - - - 1.000 1.000 zgc:194418 [Source:ZFIN;Acc:ZDB-GENE-080723-5]
3. CABZ01071407.1 CABZ01071407.1 6 2 - - - - - - - 1.000 1.000
4. MUC5B_1 MUC5B_1 7 1.89 - - - 1.000 - - - - 0.890
5. CABZ01073380.1 CABZ01073380.1 5 1.814 - - 0.814 - - - - 1.000 -
6. si:ch73-95a24.1 si:ch73-95a24.1 11 1.75 - - - - - - - 0.750 1.000
7. CR854907.1 ENSDARG00000097386 1 1 - - - - - - - - 1.000
8. si:dkeyp-46h3.6 ENSDARG00000087363 14 1 - - - - - - - 1.000 - si:dkeyp-46h3.6 [Source:ZFIN;Acc:ZDB-GENE-060503-90]
9. prlh2 ENSDARG00000071735, ENSDARG00000110890 21 1 - - 1.000 - - - - - - prolactin releasing hormone 2 [Source:ZFIN;Acc:ZDB-GENE-091204-205]
10. CST7 CST7 22 1 - - - - - - - - 1.000
11. CABZ01019904.1 ENSDARG00000104193 6 1 - - - 1.000 - - - - -
12. BX957278.1_1 ENSDARG00000010940 9 1 - - - 1.000 - - - - -
13. 5S_rRNA_17 5S_rRNA_17 4 1 - - 1.000 - - - - - -
14. MLXIPL ENSDARG00000089107, ENSDARG00000104054 5 1 - - - - - - - 1.000 - MLX interacting protein like [Source:ZFIN;Acc:ZDB-GENE-100922-66]
15. POLR2E POLR2E 1 1 - - - - - - - - 1.000
16. mov10b.2 ENSDARG00000056065, ENSDARG00000111814 3 1 - - - - - - - 1.000 - Moloney leukemia virus 10b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060526-371]
17. si:ch211-197g15.9 1 1 - - - 1.000 - - - - - si:ch211-197g15.9, transcript variant X2
18. ulk1a ENSDARG00000062518 10 1 - - - - - - - 1.000 - unc-51 like autophagy activating kinase 1a [Source:ZFIN;Acc:ZDB-GENE-080723-31]
19. cd74b ENSDARG00000036628 8 1 - - - - - - - - 1.000 CD74 molecule, major histocompatibility complex, class II invariant chain b [Source:ZFIN;Acc:ZDB-GENE-990910-10]
20. CR848788.1 ENSDARG00000103037 1 1 - - - - - - - - 1.000
21. CR847990.1 CR847990.1 21 1 - - - 1.000 - - - - -
22. si:ch211-180p9.2 si:ch211-180p9.2 1 1 - - - - - - - - 1.000
23. 5S_rRNA_10 5S_rRNA_10 2 1 - - - - - - - - 1.000
24. si:ch211-281k19.2 ENSDARG00000098133 1 1 - - - - - - - - 1.000 si:ch211-281k19.2 [Source:ZFIN;Acc:ZDB-GENE-090311-35]
25. cda 3 1 - - - - - - - - 1.000 cytidine deaminase
26. ENSDARG00000087581 ENSDARG00000087581 2 1 - - - - - - - - 1.000
27. EVA1A ENSDARG00000061405 1 1 - - - - - - - - 1.000 eva-1 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-060929-200]
28. CABZ01071530.1 CABZ01071530.1 1 1 - - - - - - - - 1.000
29. GTF3A GTF3A 6 1 - - - - - - - - 1.000
30. MEIS2 MEIS2 3 1 - - 1.000 - - - - - -
31. moxd1l ENSDARG00000069296, ENSDARG00000115126 2 1 - - - - - - - 1.000 - monooxygenase, DBH-like 1, like [Source:ZFIN;Acc:ZDB-GENE-060126-3]
32. f7i ENSDARG00000075827 4 1 - - - - - - - 1.000 - coagulation factor VIIi [Source:ZFIN;Acc:ZDB-GENE-021206-10]
33. BX572078.1 ENSDARG00000099083 1 1 - - 1.000 - - - - - -
34. IGFN1_2 IGFN1_2 3 1 - - - - - - - - 1.000
35. si:ch211-146g19.1 si:ch211-146g19.1 1 1 - - - - - - - - 1.000
36. si:ch211-145h19.4 si:ch211-145h19.4 1 1 - - 1.000 - - - - - -
37. si:ch211-95j8.3 ENSDARG00000092580 20 1 - - - - - - - 1.000 - si:ch211-95j8.3 [Source:ZFIN;Acc:ZDB-GENE-091204-307]
38. lmod2a ENSDARG00000045634, ENSDARG00000112060, ENSDARG00000113325 2 1 - - - - - - - - 1.000 leiomodin 2 (cardiac) a [Source:ZFIN;Acc:ZDB-GENE-040912-41]
39. HIST2H4B HIST2H4B 9 1 - - - - - - - - 1.000
40. PITPNM3 ENSDARG00000055255 3 1 - - - - - - - 1.000 - PITPNM family member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9216]
41. U2_5 U2_5 5 1 - - - 1.000 - - - - -
42. FAM13C FAM13C 1 1 - - - - - - - - 1.000
43. atf1 ENSDARG00000044301, ENSDARG00000109865 2 1 - - - - - - - - 1.000 activating transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4334]
44. tmtopsa 1 1 - - - 1.000 - - - - - teleost multiple tissue opsin a
45. hs3st4 ENSDARG00000052648 6 1 - - - - - - - - 1.000 heparan sulfate (glucosamine) 3-O-sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-070202-8]
46. phc2b ENSDARG00000013224 3 1 - - - - - - - 1.000 - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
47. mbd5 ENSDARG00000059581 1 1 - - - - - - - 1.000 - methyl-CpG binding domain protein 5 [Source:ZFIN;Acc:ZDB-GENE-070209-125]
48. trim35-23 ENSDARG00000102368, ENSDARG00000113611 1 1 - - - - - - - - 1.000 tripartite motif containing 35-23 [Source:ZFIN;Acc:ZDB-GENE-060503-295]
49. si:ch211-246m6.4 ENSDARG00000042857 1 1 - - - 1.000 - - - - - si:ch211-246m6.4 [Source:ZFIN;Acc:ZDB-GENE-050208-498]
50. als2a ENSDARG00000075111 29 1 - - - - - - - 1.000 - amyotrophic lateral sclerosis 2a (juvenile) [Source:ZFIN;Acc:ZDB-GENE-070402-2]
51. si:dkey-14i17.2 si:dkey-14i17.2 10 1 - - - - - - - - 1.000
52. ppp2r3a ENSDARG00000077722 7 1 - - - - - - - - 1.000 protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
53. ca5 ca5 1 1 - - - - - - - 1.000 -
54. CR936977.1 ENSDARG00000100144 4 1 - - - - - - - - 1.000
55. epb41l3b ENSDARG00000019917 9 1 - - - - - - - 1.000 - erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
56. MAPKBP1 ENSDARG00000103746 4 1 - - - - - - - 1.000 - mitogen-activated protein kinase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-120207-1]
57. si:ch73-189n23.1 ENSDARG00000086247 15 1 - - - - - - - 1.000 - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
58. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1 - - - - - - - - 1.000 si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
59. zgc:173856 ENSDARG00000045424 5 1 - - - - - - - - 1.000 zgc:173856 [Source:ZFIN;Acc:ZDB-GENE-030131-5358]
60. HMGXB3 ENSDARG00000077823 2 1 - - - - - - - 1.000 - HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
61. si:dkey-284g18.1 si:dkey-284g18.1 2 1 - - - - - - - 1.000 -
62. cacna1hb ENSDARG00000099708 1 1 - - - - - - - 1.000 - calcium channel, voltage-dependent, T type, alpha 1H subunit b [Source:ZFIN;Acc:ZDB-GENE-090312-128]
63. CMAS CMAS 10 1 - - - - - - - - 1.000
64. si:ch211-225p5.10 si:ch211-225p5.10 4 1 - - - 1.000 - - - - -
65. mir125b-3 0 1 - - - - - - - 1.000 - microRNA 125b-3
66. si:dkey-33k1.2 si:dkey-33k1.2 1 1 - - - - - - - - 1.000
67. KRT18_1 KRT18_1 17 1 - - - - - - - 1.000 -
68. zgc:174259 ENSDARG00000091136, ENSDARG00000115432 3 1 - - - 1.000 - - - - - zgc:174259 [Source:ZFIN;Acc:ZDB-GENE-080213-10]
69. si:ch211-22d5.2 ENSDARG00000079031 3 1 - - - - - - - - 1.000 si:ch211-22d5.2 [Source:ZFIN;Acc:ZDB-GENE-091204-283]
70. si:dkey-234l24.9 si:dkey-234l24.9 8 1 - - - - - - - 1.000 -
71. si:dkey-19c16.1 si:dkey-19c16.1 2 1 - - - 1.000 - - - - -
72. zgc:113295_2 ENSDARG00000074768, ENSDARG00000103947 4 1 - - - 1.000 - - - - - zgc:113295 [Source:ZFIN;Acc:ZDB-GENE-050320-122]
73. si:ch211-128b10.4 si:ch211-128b10.4 3 1 - - - - - - - - 1.000
74. tcp10 tcp10 1 1 - - - - - - - - 1.000
75. C1S ENSDARG00000100599 20 1 - - - - - - - 1.000 - complement component 1, s subcomponent [Source:ZFIN;Acc:ZDB-GENE-030131-1232]
76. chpfb ENSDARG00000078037 30 1 - - - 1.000 - - - - - chondroitin polymerizing factor b [Source:ZFIN;Acc:ZDB-GENE-100504-1]
77. CR925813.2 CR925813.2 9 1 - - - - - - - 1.000 -
78. AHSG AHSG 3 1 - - - 1.000 - - - - -
79. slc5a9 ENSDARG00000005518 16 1 - - - - - - - - 1.000 solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
80. thpo ENSDARG00000079158 1 1 - - - 1.000 - - - - - thrombopoietin [Source:ZFIN;Acc:ZDB-GENE-110510-1]
81. CU459094.2 ENSDARG00000113503 5 1 - - - - - - - 1.000 - uncharacterized LOC100331538 [Source:NCBI gene;Acc:100331538]
82. AL929378.1 ENSDARG00000117372 4 1 - - - 1.000 - - - - -
83. men1 ENSDARG00000089456 10 1 - - 1.000 - - - - - - multiple endocrine neoplasia I [Source:ZFIN;Acc:ZDB-GENE-991110-12]
84. BX323557.2 BX323557.2 1 1 - - - - - - - - 1.000
85. mxg ENSDARG00000008019 4 1 - - - 1.000 - - - - - myxovirus (influenza virus) resistance G [Source:ZFIN;Acc:ZDB-GENE-030721-10]
86. si:dkey-94f20.4 ENSDARG00000016923 2 1 - - - - - - - 1.000 - si:dkey-94f20.4 [Source:ZFIN;Acc:ZDB-GENE-121214-276]
87. si:dkeyp-25a3.1 si:dkeyp-25a3.1 4 1 - - - - - - - - 1.000
88. si:ch211-117l17.4 ENSDARG00000103534 24 1 - - - - - - - - 1.000 si:ch211-117l17.4 [Source:ZFIN;Acc:ZDB-GENE-110913-102]
89. ST3GAL1 ENSDARG00000079654 2 1 - - - - - - - - 1.000 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060321-1]
90. si:ch211-199i18.8 si:ch211-199i18.8 4 1 - - - - - - - - 1.000
91. DGKA DGKA 8 1 - - - - - - - - 1.000
92. si:dkey-270b7.4 si:dkey-270b7.4 11 1 - - - - - - - 1.000 -
93. PHF21B ENSDARG00000109502 6 1 - - - 1.000 - - - - - PHD finger protein 21B [Source:HGNC Symbol;Acc:HGNC:25161]
94. BX537350.1 BX537350.1 8 1 - - - - - - - - 1.000
95. radil ENSDARG00000079779 14 1 - - - - - - - - 1.000 Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
96. MFAP4_3 MFAP4_3 7 1 - - - 1.000 - - - - -
97. CABZ01057951.1 CABZ01057951.1 10 1 - - - - - - - - 1.000
98. si:ch211-163f10.4 si:ch211-163f10.4 1 1 - - - - - - - - 1.000
99. desmb ENSDARG00000005221, ENSDARG00000110245 3 1 - - - - - - - - 1.000 desmin b [Source:ZFIN;Acc:ZDB-GENE-061027-102]
100. ftr58 ENSDARG00000071238 10 1 - - - 1.000 - - - - - finTRIM family, member 58 [Source:ZFIN;Acc:ZDB-GENE-080219-44]

There are 210 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA