Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-3d4.1

Gene Name Gene ID Reads Annotation
si:dkey-3d4.1 si:dkey-3d4.1 37










Genes with expression patterns similar to si:dkey-3d4.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-3d4.1 si:dkey-3d4.1 37 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. rnf213b ENSDARG00000103551 63 1.95 - 1.000 - - - 0.950 - - - ring finger protein 213b [Source:ZFIN;Acc:ZDB-GENE-110822-1]
3. lgalslb ENSDARG00000055525 18 1.948 - 1.000 - - - 0.948 - - - lectin, galactoside-binding-like b [Source:ZFIN;Acc:ZDB-GENE-030616-570]
4. MSRA ENSDARG00000029587 30 1.88 - 1.000 - - - - 0.880 - - methionine sulfoxide reductase A [Source:ZFIN;Acc:ZDB-GENE-041014-344]
5. CABZ01074081.1 CABZ01074081.1 109 1.876 - - - - - 0.969 0.907 - -
6. cdx1b ENSDARG00000116139 113 1.861 - 1.000 - - - - 0.861 - - caudal type homeobox 1 b [Source:ZFIN;Acc:ZDB-GENE-070615-29]
7. chia.3 ENSDARG00000009612 14 1.785 - - - - - 0.967 - 0.818 - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
8. sprn ENSDARG00000056004 128 1.741 0.741 1.000 - - - - - - - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
9. zgc:162576 zgc:162576 56 1.735 - 0.802 - - - - - - 0.933
10. sfi1 ENSDARG00000053992 1075 1.728 - - - - - 0.921 0.807 - - SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
11. BX511189.1 BX511189.1 34 1.708 - 1.000 - - - - 0.708 - -
12. BX470224.1 ENSDARG00000092793 22 1.708 - 1.000 - - - - 0.708 - -
13. tcf23 ENSDARG00000087381 6 1.708 - 1.000 - - - - 0.708 - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
14. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1.703 0.703 1.000 - - - - - - -
15. ercc5 ENSDARG00000023678 468 1.685 - - - - - 0.860 0.825 - - excision repair cross-complementation group 5 [Source:ZFIN;Acc:ZDB-GENE-050327-28]
16. fkbp5 ENSDARG00000028396 20 1.673 - - - - - 0.938 - - 0.735 FK506 binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-030616-630]
17. si:dkey-1p9.5 si:dkey-1p9.5 55 1.665 - - - - - 0.840 - 0.825 -
18. elp2 ENSDARG00000017199 399 1.66 - - - - - 0.890 0.770 - - elongator acetyltransferase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060503-525]
19. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.65 0.729 0.921 - - - - - - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
20. ANXA9 ANXA9 74 1.621 - - - - - 0.853 - 0.768 -
21. hoxc11b ENSDARG00000102631 808 1.589 - - - - - 0.869 0.720 - - homeobox C11b [Source:ZFIN;Acc:ZDB-GENE-000822-3]
22. sdr39u1 ENSDARG00000099617 225 1.586 - - - - - 0.760 0.826 - - short chain dehydrogenase/reductase family 39U, member 1 [Source:ZFIN;Acc:ZDB-GENE-060929-104]
23. zgc:153031 ENSDARG00000068876 73 1.571 - 0.704 - - - 0.867 - - - zgc:153031 [Source:ZFIN;Acc:ZDB-GENE-060929-1190]
24. tcf19l ENSDARG00000040036 369 1.57 - - - - - 0.849 0.721 - - transcription factor 19 (SC1), like [Source:ZFIN;Acc:ZDB-GENE-060324-2]
25. CABZ01067609.1 CABZ01067609.1 111 1.54 - - - - - 0.803 - 0.737 -
26. CDHR2_1 CDHR2_1 12 1.537 - 0.829 - - - - 0.708 - -
27. arhgef28 ENSDARG00000060415 142 1.528 - - - - - 0.756 0.772 - - Rho guanine nucleotide exchange factor (GEF) 28 [Source:ZFIN;Acc:ZDB-GENE-060531-28]
28. coro6 ENSDARG00000102272 76 1.515 - 0.784 - - - - 0.731 - - coronin 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1202]
29. tnfaip1 ENSDARG00000041565, ENSDARG00000113688, ENSDARG00000115018 553 1.487 - - - - - 0.755 0.732 - - tumor necrosis factor, alpha-induced protein 1 (endothelial) [Source:ZFIN;Acc:ZDB-GENE-030131-5610]
30. qser1 ENSDARG00000074750 597 1.469 - - - - - 0.716 0.753 - - glutamine and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2978]
31. CR932358.2 CR932358.2 15 1.451 - - 0.715 - - - 0.736 - -
32. eea1 ENSDARG00000062868 1126 1.444 - - - - - 0.708 0.736 - - early endosome antigen 1 [Source:ZFIN;Acc:ZDB-GENE-041111-270]
33. cnih3 ENSDARG00000014953 25 1.441 - 0.731 0.710 - - - - - - cornichon family AMPA receptor auxiliary protein 3 [Source:ZFIN;Acc:ZDB-GENE-041001-180]
34. ovca2 ENSDARG00000103748 38 1.417 - 0.709 - - - - 0.708 - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
35. si:ch211-255a21.4 si:ch211-255a21.4 26 1 - 1.000 - - - - - - -
36. si:dkey-57a22.13 ENSDARG00000092345, ENSDARG00000116169 2 1 - 1.000 - - - - - - - si:dkey-57a22.13 [Source:ZFIN;Acc:ZDB-GENE-081104-425]
37. dnah1 ENSDARG00000100115 17 1 - 1.000 - - - - - - - dynein, axonemal, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-081015-3]
38. LGALS8_1 LGALS8_1 29 1 - 1.000 - - - - - - -
39. CU694254.1 CU694254.1 4 1 - 1.000 - - - - - - -
40. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 - 1.000 - - - - - - -
41. crygm2d10 ENSDARG00000087765 358 1 - 1.000 - - - - - - - crystallin, gamma M2d10 [Source:ZFIN;Acc:ZDB-GENE-071004-96]
42. zgc:195633 19 1 - 1.000 - - - - - - - zgc:195633
43. PGBD4 ENSDARG00000079328 20 1 - 1.000 - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
44. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1 - 1.000 - - - - - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
45. si:ch211-113a14.26_3 6 1 - 1.000 - - - - - - - si:ch211-113a14.26
46. scin ENSDARG00000010728, ENSDARG00000111092 437 1 - 1.000 - - - - - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
47. BX321871.2 BX321871.2 1 1 - 1.000 - - - - - - -
48. si:dkey-218i12.3 si:dkey-218i12.3 4 1 - 1.000 - - - - - - -
49. mstnb ENSDARG00000069133 3 1 - 1.000 - - - - - - - myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
50. eif2b5 ENSDARG00000074995 8 1 - 1.000 - - - - - - - eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-5364]
51. CABZ01089980.1 ENSDARG00000117446 16 1 - 1.000 - - - - - - -
52. zgc:152951 ENSDARG00000068663, ENSDARG00000113135 22 1 - 1.000 - - - - - - - zgc:152951 [Source:ZFIN;Acc:ZDB-GENE-060929-416]
53. sult3st1 ENSDARG00000009885 218 1 - 1.000 - - - - - - - sulfotransferase family 3, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-061207-52]
54. atat1 ENSDARG00000004472 700 1 - 1.000 - - - - - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
55. KCNJ6 ENSDARG00000058985 71 1 - 1.000 - - - - - - - potassium voltage-gated channel subfamily J member 6 [Source:HGNC Symbol;Acc:HGNC:6267]
56. CCDC50_1 CCDC50_1 1 1 - 1.000 - - - - - - -
57. si:dkey-273g18.1_1 ENSDARG00000097405, ENSDARG00000105439 5 1 - 1.000 - - - - - - - si:dkey-273g18.1 [Source:ZFIN;Acc:ZDB-GENE-060503-256]
58. zgc:194665 ENSDARG00000004577 136 1 - 1.000 - - - - - - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
59. CU855821.2 CU855821.2 21 1 - 1.000 - - - - - - -
60. c3c c3c 174 1 - 1.000 - - - - - - -
61. atf1 ENSDARG00000044301, ENSDARG00000109865 2 1 - 1.000 - - - - - - - activating transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4334]
62. zmiz2 ENSDARG00000098683 1 1 - 1.000 - - - - - - - zinc finger, MIZ-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-285]
63. LRP3 ENSDARG00000008485 1401 1 - 1.000 - - - - - - - low density lipoprotein receptor-related protein 3 [Source:ZFIN;Acc:ZDB-GENE-080116-3]
64. vwc2 ENSDARG00000076495 22 1 - 1.000 - - - - - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
65. si:ch73-346o4.3 si:ch73-346o4.3 29 1 - 1.000 - - - - - - -
66. dap1b_1 ENSDARG00000086842, ENSDARG00000109678 830 1 - 1.000 - - - - - - - death associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-000511-4]
67. BTBD17 BTBD17 53 1 - 1.000 - - - - - - -
68. CABZ01065506.1 CABZ01065506.1 204 1 - 1.000 - - - - - - -
69. sox8 sox8 109 1 - 1.000 - - - - - - -
70. kcnj14 ENSDARG00000075914 38 1 - 1.000 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 14 [Source:ZFIN;Acc:ZDB-GENE-100922-48]
71. zgc:174153 ENSDARG00000079376 12007 1 - 1.000 - - - - - - - zgc:174153 [Source:ZFIN;Acc:ZDB-GENE-080215-7]
72. TENM2 ENSDARG00000037122 48 1 - 1.000 - - - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
73. SACS ENSDARG00000091042 15 1 - 1.000 - - - - - - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
74. si:dkey-242g16.2 ENSDARG00000069377 7 1 - 1.000 - - - - - - - si:dkey-242g16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8324]
75. necab1 ENSDARG00000056566, ENSDARG00000111028 26 1 - 1.000 - - - - - - - N-terminal EF-hand calcium binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-395]
76. gpr88 24 1 - 1.000 - - - - - - - G protein-coupled receptor 88
77. olig3 ENSDARG00000074253 84 1 - 1.000 - - - - - - - oligodendrocyte transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-080903-1]
78. KCNIP4 ENSDARG00000088100 86 1 - 1.000 - - - - - - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
79. si:dkey-149m13.1 si:dkey-149m13.1 6 1 - 1.000 - - - - - - -
80. si:dkey-287f10.2 si:dkey-287f10.2 3 1 - 1.000 - - - - - - -
81. DNAJC14 ENSDARG00000105398 20 1 - 1.000 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 14 [Source:ZFIN;Acc:ZDB-GENE-121105-7]
82. mettl11b ENSDARG00000042033 176 1 - 1.000 - - - - - - - methyltransferase like 11B [Source:ZFIN;Acc:ZDB-GENE-081104-175]
83. si:ch211-263m18.4 ENSDARG00000093353 27 1 - 1.000 - - - - - - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
84. bcl11ba ENSDARG00000062510 169 1 - 1.000 - - - - - - - B cell CLL/lymphoma 11Ba [Source:ZFIN;Acc:ZDB-GENE-061207-62]
85. CABZ01055343.1 CABZ01055343.1 12 1 - 1.000 - - - - - - -
86. CABZ01038313.1 CABZ01038313.1 79 1 - 1.000 - - - - - - -
87. calb2a ENSDARG00000041062, ENSDARG00000110220 459 1 - 1.000 - - - - - - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
88. CT573494.2 CT573494.2 58 1 - 1.000 - - - - - - -
89. pappa2 ENSDARG00000076020 89 1 - 1.000 - - - - - - - pappalysin 2 [Source:ZFIN;Acc:ZDB-GENE-070912-525]
90. GRAMD3 GRAMD3 4 1 - 1.000 - - - - - - -
91. vat1l ENSDARG00000101280 1 1 - 1.000 - - - - - - - vesicle amine transport 1-like [Source:ZFIN;Acc:ZDB-GENE-080204-21]
92. CABZ01074423.1 CABZ01074423.1 8 1 - 1.000 - - - - - - -
93. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 1 - 1.000 - - - - - - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
94. ggt1a ENSDARG00000023526 26 1 - 1.000 - - - - - - - gamma-glutamyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1388]
95. zdhhc18a ENSDARG00000069807 8 1 - 1.000 - - - - - - - zinc finger, DHHC-type containing 18a [Source:ZFIN;Acc:ZDB-GENE-060929-424]
96. rnf207b ENSDARG00000012409, ENSDARG00000116638 139 1 - 1.000 - - - - - - - ring finger protein 207b [Source:ZFIN;Acc:ZDB-GENE-080227-9]
97. SEMA6B SEMA6B 35 1 - 1.000 - - - - - - -
98. ca5 ca5 1 1 - 1.000 - - - - - - -
99. BX000430.1 ENSDARG00000112057 135 1 - 1.000 - - - - - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
100. ltk ENSDARG00000042861, ENSDARG00000116109 76 1 - 1.000 - - - - - - - leukocyte receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030616-115]

There are 1309 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA