Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:dkey-3d18.4

Gene Name Gene ID Reads Annotation
si:dkey-3d18.4 si:dkey-3d18.4 43










Genes with expression patterns similar to si:dkey-3d18.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-3d18.4 si:dkey-3d18.4 43 8 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000
2. si:dkey-5n7.2 ENSDARG00000102339 42 1.923 - - - - - 0.933 0.990 - - si:dkey-5n7.2 [Source:ZFIN;Acc:ZDB-GENE-050420-254]
3. CR631122.1 ENSDARG00000044534 8 1.9 0.913 - - - - - 0.987 - - protein RD3-like [Source:NCBI gene;Acc:100149591]
4. si:dkey-153n9.5 si:dkey-153n9.5 20 1.879 - - - - - 0.892 0.987 - -
5. si:dkey-192i18.3 si:dkey-192i18.3 47 1.87 0.919 - - - 0.951 - - - -
6. si:ch211-161h7.8 ENSDARG00000089919 60 1.842 0.913 - - - - - 0.929 - - si:ch211-161h7.8 [Source:ZFIN;Acc:ZDB-GENE-091204-302]
7. insl5a ENSDARG00000070966, ENSDARG00000112563 45 1.841 - - - - - 0.892 0.949 - - insulin-like 5a [Source:ZFIN;Acc:ZDB-GENE-050310-4]
8. CCNJ ENSDARG00000059917 115 1.829 0.889 - - - - - 0.940 - - cyclin J [Source:ZFIN;Acc:ZDB-GENE-100721-4]
9. hoxc13a ENSDARG00000070353 4815 1.821 - - - - - 0.910 0.911 - - homeobox C13a [Source:ZFIN;Acc:ZDB-GENE-000822-4]
10. CU302326.2 CU302326.2 54 1.775 - 0.815 - - - - 0.960 - -
11. casp6l1 ENSDARG00000025608, ENSDARG00000117004 107 1.756 - - - - 1.000 0.756 - - - caspase 6, apoptosis-related cysteine peptidase, like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-48]
12. drd4-rs ENSDARG00000001912 45 1.746 - 0.815 - - - 0.931 - - - dopamine receptor D4 related sequence [Source:ZFIN;Acc:ZDB-GENE-051113-172]
13. hoxd13a ENSDARG00000059256 1190 1.73 - - - - - 0.777 0.953 - - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
14. HMBOX1 HMBOX1 67 1.73 - 0.815 - - - - 0.915 - -
15. zgc:173594 57 1.728 0.913 0.815 - - - - - - - zgc:173594
16. lsm14b ENSDARG00000025386 23 1.721 - 0.815 - - - 0.906 - - - LSM family member 14B [Source:ZFIN;Acc:ZDB-GENE-040426-779]
17. poc1b ENSDARG00000021110, ENSDARG00000116944 254 1.719 - - - - - 0.773 0.946 - - POC1 centriolar protein B [Source:ZFIN;Acc:ZDB-GENE-031118-54]
18. olfml2bb ENSDARG00000021480 256 1.703 0.888 0.815 - - - - - - - olfactomedin-like 2Bb [Source:ZFIN;Acc:ZDB-GENE-070912-266]
19. FAM183B FAM183B 25 1.694 0.879 0.815 - - - - - - -
20. dysf ENSDARG00000007370 125 1.691 0.704 - - - - - 0.987 - - dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive) [Source:ZFIN;Acc:ZDB-GENE-070501-1]
21. hdac6 ENSDARG00000008384 144 1.684 0.842 - - - - - 0.842 - - histone deacetylase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3232]
22. ptger1b ENSDARG00000104847 91 1.683 0.913 - - - - 0.770 - - - prostaglandin E receptor 1b (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-100922-278]
23. oxgr1a.1 ENSDARG00000033684 24 1.672 - 0.815 - - 0.857 - - - - oxoglutarate (alpha-ketoglutarate) receptor 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6734]
24. ncf4 ENSDARG00000040812, ENSDARG00000110339 45 1.658 - - - - 0.849 0.809 - - - neutrophil cytosolic factor 4 [Source:ZFIN;Acc:ZDB-GENE-041124-1]
25. SERTAD4 ENSDARG00000089795 791 1.656 0.856 - - - - - 0.800 - - SERTA domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-090313-199]
26. C25H1orf51 C25H1orf51 2460 1.654 0.848 - - - - - 0.806 - -
27. rpgra ENSDARG00000056617 77 1.653 0.928 - - - 0.725 - - - - retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]
28. CR848029.2 CR848029.2 215 1.652 - 0.851 - - - 0.801 - - -
29. pc pc 116 1.638 - - - - - 0.759 0.879 - -
30. si:ch211-241n15.2 si:ch211-241n15.2 435 1.636 - - - - - 0.870 0.766 - -
31. ENSDARG00000088164 ENSDARG00000088164 59 1.635 - 0.815 - - - - 0.820 - -
32. atn1 ENSDARG00000092067 257 1.631 - 0.815 - - - - 0.816 - - atrophin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-426]
33. zgc:173575 ENSDARG00000078281, ENSDARG00000115456 190 1.628 - - - - 0.777 0.851 - - - zgc:173575 [Source:ZFIN;Acc:ZDB-GENE-080218-25]
34. FAM65C 127 1.627 0.892 0.735 - - - - - - - family with sequence similarity 65, member C, transcript variant X2
35. usp11 ENSDARG00000076303 183 1.627 0.826 - - - - 0.801 - - - ubiquitin specific peptidase 11 [Source:ZFIN;Acc:ZDB-GENE-081104-421]
36. cry5 ENSDARG00000019498 90 1.614 0.703 - - - - 0.911 - - - cryptochrome circadian clock 5 [Source:ZFIN;Acc:ZDB-GENE-010426-8]
37. edem2 ENSDARG00000028448 236 1.604 - - - - - 0.738 0.866 - - ER degradation enhancer, mannosidase alpha-like 2 [Source:ZFIN;Acc:ZDB-GENE-060519-1]
38. stard3nl ENSDARG00000045421 316 1.589 0.807 - - - - - 0.782 - - STARD3 N-terminal like [Source:ZFIN;Acc:ZDB-GENE-040718-4]
39. dvl1b ENSDARG00000055552 146 1.566 - 0.760 - - - - 0.806 - - dishevelled segment polarity protein 1b [Source:ZFIN;Acc:ZDB-GENE-071004-1]
40. ppp1r12c ENSDARG00000052423 183 1.564 - - - - - 0.768 0.796 - - protein phosphatase 1, regulatory subunit 12C [Source:ZFIN;Acc:ZDB-GENE-010724-11]
41. dkk3b ENSDARG00000070683 209 1.552 - - - - 0.756 0.796 - - - dickkopf WNT signaling pathway inhibitor 3b [Source:ZFIN;Acc:ZDB-GENE-061207-74]
42. rufy2 ENSDARG00000062019, ENSDARG00000116213, ENSDARG00000116286 409 1.551 0.745 - - - - - 0.806 - - RUN and FYVE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070424-66]
43. CR855306.1 ENSDARG00000099475 102 1.547 0.818 0.729 - - - - - - -
44. wbp11 ENSDARG00000099151, ENSDARG00000101411 567 1.54 - - - - - 0.789 0.751 - - WW domain binding protein 11 [Source:ZFIN;Acc:ZDB-GENE-040426-1829]
45. nrd1 nrd1 324 1.535 0.824 - - - - - 0.711 - -
46. TMEM120A ENSDARG00000030914 266 1.483 0.757 - - - - 0.726 - - - transmembrane protein 120A [Source:ZFIN;Acc:ZDB-GENE-070424-21]
47. pkp2 ENSDARG00000023026 120 1.481 0.703 - - - - - 0.778 - - plakophilin 2 [Source:ZFIN;Acc:ZDB-GENE-041210-167]
48. fbxo25 ENSDARG00000075172 153 1.472 0.754 - - - - 0.718 - - - F-box protein 25 [Source:ZFIN;Acc:ZDB-GENE-040801-19]
49. si:ch73-27e22.5 si:ch73-27e22.5 10 1 - - - - 1.000 - - - -
50. dnali1 ENSDARG00000069815 10 1 - 1.000 - - - - - - - dynein, axonemal, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-080204-7]
51. zgc:171759_6 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 15 1 - 1.000 - - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
52. baiap2l2 baiap2l2 30 1 - 1.000 - - - - - - -
53. cul5b ENSDARG00000004260 9 1 - 1.000 - - - - - - - cullin 5b [Source:ZFIN;Acc:ZDB-GENE-091113-45]
54. si:dkey-26i13.8 ENSDARG00000062606 13 1 - - - - 1.000 - - - - si:dkey-26i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-134]
55. KCNMB3 KCNMB3 5 1 - 1.000 - - - - - - -
56. tceb3 40 1 - - - - - - 1.000 - - transcription elongation factor B (SIII), polypeptide 3
57. CNGB1 CNGB1 40 1 - - - - - - 1.000 - -
58. CR388163.4 CR388163.4 4 1 - - - - 1.000 - - - -
59. si:ch211-59h6.1 ENSDARG00000013022 193 1 - 1.000 - - - - - - - si:ch211-59h6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-418]
60. si:dkey-164k14.1 si:dkey-164k14.1 5 1 - 1.000 - - - - - - -
61. stk32a ENSDARG00000079499 17 1 - - - - 1.000 - - - - serine/threonine kinase 32A [Source:ZFIN;Acc:ZDB-GENE-091204-271]
62. pld6 ENSDARG00000059951 17 1 - 1.000 - - - - - - - phospholipase D family, member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3825]
63. SPAG17 SPAG17 31 1 - - - - - - 1.000 - -
64. prph2l ENSDARG00000021345 3 1 - - - - 1.000 - - - - peripherin 2, like [Source:ZFIN;Acc:ZDB-GENE-041001-147]
65. si:dkey-30c15.12 ENSDARG00000058546 12 1 - - - - 1.000 - - - - si:dkey-30c15.12 [Source:ZFIN;Acc:ZDB-GENE-060503-920]
66. COL5A3 COL5A3 3 1 - - - - 1.000 - - - -
67. gnai3 ENSDARG00000030644 29 1 - 1.000 - - - - - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
68. CU693366.1 CU693366.1 186 1 - 1.000 - - - - - - -
69. CR942805.1 CR942805.1 94 1 - 1.000 - - - - - - -
70. EFCAB10 EFCAB10 3 1 - - - - 1.000 - - - -
71. map3k8 ENSDARG00000061710 76 1 - 1.000 - - - - - - - mitogen-activated protein kinase kinase kinase 8 [Source:ZFIN;Acc:ZDB-GENE-100316-8]
72. ECM1 ECM1 87 1 - 1.000 - - - - - - -
73. ankrd1b ENSDARG00000076192 204 1 - - - - 1.000 - - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
74. zgc:174708 zgc:174708 11 0.999 - - - - 0.999 - - - -
75. slc37a1 ENSDARG00000086103 16 0.999 - - - - 0.999 - - - - solute carrier family 37 (glucose-6-phosphate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-041114-151]
76. mxc ENSDARG00000024789 68 0.999 - - - - 0.999 - - - - myxovirus (influenza virus) resistance C [Source:ZFIN;Acc:ZDB-GENE-030721-7]
77. ftr58 ENSDARG00000071238 10 0.999 - - - - 0.999 - - - - finTRIM family, member 58 [Source:ZFIN;Acc:ZDB-GENE-080219-44]
78. si:ch211-207e7.1 si:ch211-207e7.1 33 0.998 - - - - 0.998 - - - -
79. rhbdl1 ENSDARG00000087040 23 0.994 - - - - - - 0.994 - - rhomboid, veinlet-like 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-120529-2]
80. cngb3 cngb3 12 0.994 - - - - 0.994 - - - -
81. DOCK1 ENSDARG00000099093 21 0.991 - - - - 0.991 - - - - dedicator of cytokinesis 1 [Source:ZFIN;Acc:ZDB-GENE-080108-5]
82. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 0.991 - - - - 0.991 - - - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
83. si:dkey-71h2.2 ENSDARG00000043394 11 0.99 - - - - 0.990 - - - - si:dkey-71h2.2 [Source:ZFIN;Acc:ZDB-GENE-041014-145]
84. zp2.2 ENSDARG00000105346 23 0.987 - - - - - - 0.987 - - zona pellucida glycoprotein 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-010622-1]
85. SI:DKEY-79P17.2 SI:DKEY-79P17.2 3 0.987 - - - - - - 0.987 - -
86. si:dkey-234l24.8 ENSDARG00000093588 7 0.987 - - - - - - 0.987 - - si:dkey-234l24.8 [Source:ZFIN;Acc:ZDB-GENE-050420-23]
87. C24H16orf11 C24H16orf11 32 0.987 - - - - - - 0.987 - -
88. si:ch211-117n7.8 si:ch211-117n7.8 83 0.987 - - - - - - 0.987 - -
89. bik ENSDARG00000045549 18 0.987 - - - - - - 0.987 - - BCL2 interacting killer [Source:ZFIN;Acc:ZDB-GENE-041210-181]
90. zgc:153039 ENSDARG00000102724 4 0.987 - - - - - - 0.987 - - zgc:153039 [Source:ZFIN;Acc:ZDB-GENE-060929-736]
91. hbl3 11 0.987 - - - - - - 0.987 - - hexose-binding lectin 3, transcript variant X1
92. btr09 ENSDARG00000054805, ENSDARG00000115798 20 0.987 - - - - - - 0.987 - - bloodthirsty-related gene family, member 9 [Source:ZFIN;Acc:ZDB-GENE-080722-46]
93. slc22a5 ENSDARG00000101021 20 0.987 - - - - - - 0.987 - - solute carrier family 22 (organic cation/carnitine transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-091012-1]
94. inhbab ENSDARG00000024759 29 0.987 - - - - - - 0.987 - - inhibin subunit beta Ab [Source:ZFIN;Acc:ZDB-GENE-050525-2]
95. myo10l1 ENSDARG00000074723 21 0.987 - - - - - - 0.987 - - myosin X-like 1 [Source:ZFIN;Acc:ZDB-GENE-080425-1]
96. PLEKHS1_1 PLEKHS1_1 23 0.987 - - - - - - 0.987 - -
97. PDILT PDILT 6 0.987 - - - - - - 0.987 - -
98. zgc:110782 ENSDARG00000044544 48 0.987 - - - - - - 0.987 - - zgc:110782 [Source:ZFIN;Acc:ZDB-GENE-050320-51]
99. trim35-37 trim35-37 2 0.987 - - - - - - 0.987 - -
100. cryba2a ENSDARG00000030349 1342 0.987 - - - - - - 0.987 - - crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]

There are 1236 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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