Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-246i21.1

Gene Name Gene ID Reads Annotation
si:dkey-246i21.1 197 si:dkey-246i21.1, transcript variant X2










Genes with expression patterns similar to si:dkey-246i21.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-246i21.1 197 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-246i21.1, transcript variant X2
2. nt5dc3 ENSDARG00000062949 816 2.267 - 0.775 - - - 0.709 0.783 - - 5'-nucleotidase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-080523-3]
3. sult1st5 ENSDARG00000003475, ENSDARG00000111502 34 1.686 - - - - - 0.884 - 0.802 - sulfotransferase family 1, cytosolic sulfotransferase 5 [Source:ZFIN;Acc:ZDB-GENE-050809-2]
4. myhc4 ENSDARG00000035438 1322 1.641 - 0.853 - - - - 0.788 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
5. CR450814.3 CR450814.3 608 1.619 - 0.844 - - - - 0.775 - -
6. kcnj2 kcnj2 326 1.619 - 0.888 - - - - - 0.731 -
7. nmrk2 ENSDARG00000067848 10293 1.618 - 0.850 - - - - 0.768 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
8. rnf41l ENSDARG00000073918 329 1.618 - 0.790 - - - 0.828 - - - ring finger protein 41, like [Source:ZFIN;Acc:ZDB-GENE-030131-9441]
9. CU929408.1 CU929408.1 714 1.618 - 0.710 - - - 0.908 - - -
10. jph1a ENSDARG00000058603 2852 1.613 - 0.879 - - - - 0.734 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
11. alpk3a ENSDARG00000078989 1992 1.611 - 0.833 - - - - 0.778 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
12. fitm1 ENSDARG00000056464 1759 1.607 - 0.803 - - - - 0.804 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
13. ehbp1l1b ENSDARG00000079895 559 1.595 - 0.827 - - - 0.768 - - - EH domain binding protein 1-like 1b [Source:ZFIN;Acc:ZDB-GENE-091204-238]
14. trdn ENSDARG00000041779 4283 1.591 - 0.753 - - - - 0.838 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
15. CR388002.1 CR388002.1 1998 1.591 - 0.859 - - - - 0.732 - -
16. LRRC8E LRRC8E 495 1.585 - - - - - 0.814 - 0.771 -
17. txlnbb ENSDARG00000076241 6396 1.585 - 0.832 - - - - 0.753 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
18. slc43a1b ENSDARG00000037748 1406 1.567 - 0.729 - - - 0.838 - - - solute carrier family 43 (amino acid system L transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-070209-173]
19. ARAP2 ARAP2 428 1.566 - 0.832 - - - 0.734 - - -
20. chrnd ENSDARG00000019342 2728 1.565 - 0.782 - - - - 0.783 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
21. kcnf1a ENSDARG00000027940 155 1.565 - 0.742 - - - 0.823 - - - potassium voltage-gated channel, subfamily F, member 1a [Source:ZFIN;Acc:ZDB-GENE-041001-217]
22. ryr3 ENSDARG00000071331 6795 1.563 - 0.758 - - - - 0.805 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
23. CABZ01088061.1 CABZ01088061.1 695 1.562 0.726 - - - - 0.836 - - -
24. sh3bgr ENSDARG00000021633 3498 1.557 - 0.805 - - - - 0.752 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
25. tnw 16679 1.554 - 0.813 - - - - 0.741 - - tenascin W, transcript variant X2
26. setd3 ENSDARG00000016513 1507 1.549 - 0.758 - - - - 0.791 - - SET domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9137]
27. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.547 - 0.790 - - - - 0.757 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
28. BX530018.3 ENSDARG00000107022 614 1.547 - 0.794 - - - 0.753 - - -
29. C12H10orf71 C12H10orf71 595 1.544 - 0.824 - - - - 0.720 - -
30. CABZ01043311.1 CABZ01043311.1 475 1.542 - 0.721 - - - - 0.821 - -
31. srl ENSDARG00000104587 11126 1.538 - 0.824 - - - - 0.714 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
32. BX294434.1 ENSDARG00000061272 6493 1.535 - 0.784 - - - - 0.751 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
33. prx ENSDARG00000017246 6183 1.535 - 0.725 - - - - 0.810 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
34. slc6a8 ENSDARG00000043646 1114 1.524 - - - - - 0.811 0.713 - - solute carrier family 6 (neurotransmitter transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-071024-2]
35. ntmt1 ENSDARG00000022399 5779 1.523 - 0.781 - - - - 0.742 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
36. prss12 ENSDARG00000061830 593 1.514 - - - - - - 0.758 0.756 - serine protease 12 [Source:ZFIN;Acc:ZDB-GENE-090313-45]
37. mef2aa ENSDARG00000031756 2699 1.514 - 0.790 - - - - 0.724 - - myocyte enhancer factor 2aa [Source:ZFIN;Acc:ZDB-GENE-990415-163]
38. TRIM63 TRIM63 1600 1.503 - 0.727 - - - - 0.776 - -
39. sptb ENSDARG00000030490 7128 1.503 - 0.775 - - - - 0.728 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
40. zgc:66479 ENSDARG00000008732 3347 1.499 - 0.790 - - - - 0.709 - - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
41. hsd17b7 ENSDARG00000088140 185 1.496 - 0.705 - - - 0.791 - - - hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
42. tnnc1b ENSDARG00000037539 13945 1.492 - 0.728 - - - - 0.764 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
43. tnnt2d ENSDARG00000002988 7590 1.492 - 0.746 - - - - 0.746 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
44. naca ENSDARG00000005513 2745 1.49 - 0.723 - - - 0.767 - - - nascent polypeptide associated complex subunit alpha [Source:ZFIN;Acc:ZDB-GENE-020423-4]
45. vwde ENSDARG00000103443 5758 1.487 - 0.753 - - - - 0.734 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
46. asb5b ENSDARG00000053222 1207 1.482 - 0.763 - - - - 0.719 - - ankyrin repeat and SOCS box containing 5b [Source:ZFIN;Acc:ZDB-GENE-050417-271]
47. zgc:153662 zgc:153662 4604 1.481 - 0.772 - - - - 0.709 - -
48. NRAP ENSDARG00000009341 3565 1.481 - 0.777 - - - - 0.704 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
49. sox9a ENSDARG00000003293 812 1.477 - 0.746 - - - - 0.731 - - SRY (sex determining region Y)-box 9a [Source:ZFIN;Acc:ZDB-GENE-001103-1]
50. hapln1a ENSDARG00000089769 12334 1.477 - 0.714 - - - - 0.763 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
51. ryr1b ENSDARG00000023797 5693 1.476 - 0.770 - - - - 0.706 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
52. zgc:110353 ENSDARG00000039443 80 1.467 - - - - - 0.709 - 0.758 - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
53. chrna1 ENSDARG00000009021 2931 1.464 - 0.700 - - - - 0.764 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
54. CR792456.1 CR792456.1 783 1.46 - 0.734 - - - - 0.726 - -
55. EHBP1L1 EHBP1L1 2500 1.459 - 0.752 - - - - 0.707 - -
56. ppm1la ENSDARG00000063218 2142 1.458 - 0.729 - - - - 0.729 - - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
57. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 1.458 - - 0.728 - - - 0.730 - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
58. plod2 ENSDARG00000011821 1656 1.458 - 0.735 - - - - 0.723 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
59. clic5a ENSDARG00000075993, ENSDARG00000115073 607 1.452 - 0.701 - - - - 0.751 - - chloride intracellular channel 5a [Source:ZFIN;Acc:ZDB-GENE-041114-84]
60. si:dkey-1f1.4 si:dkey-1f1.4 105 1.452 0.727 - - - - - - 0.725 -
61. znf106a ENSDARG00000016651 6049 1.448 - 0.717 - - - - 0.731 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
62. PTPLA PTPLA 4044 1.446 - 0.710 - - - - 0.736 - -
63. cacng1 cacng1 3118 1.442 - 0.721 - - - - 0.721 - -
64. plekhg5a ENSDARG00000025902 397 1.442 - 0.731 - - - - 0.711 - - pleckstrin homology domain containing, family G (with RhoGef domain) member 5a [Source:ZFIN;Acc:ZDB-GENE-060503-766]
65. qrsl1 ENSDARG00000032704 200 1.437 - 0.704 - - - 0.733 - - - glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5540]
66. cmc2 ENSDARG00000043635 591 1.432 - - - - - 0.731 0.701 - - C-x(9)-C motif containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-409]
67. crim1 ENSDARG00000029668 118 1.428 - - - - - 0.727 0.701 - - cysteine rich transmembrane BMP regulator 1 (chordin-like) [Source:ZFIN;Acc:ZDB-GENE-040312-2]
68. C13H10orf71 3489 1.414 - 0.714 - - - - 0.700 - - chromosome 13 C10orf71 homolog
69. txnipb ENSDARG00000070000 2365 1.41 - 0.705 - - - - 0.705 - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
70. ankrd1a ENSDARG00000075263, ENSDARG00000110628, ENSDARG00000114111 252 0.946 - - - - - 0.946 - - - ankyrin repeat domain 1a (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-100405-1]
71. nptx2a ENSDARG00000037794 127 0.939 - - - - - 0.939 - - - neuronal pentraxin 2a [Source:ZFIN;Acc:ZDB-GENE-060707-1]
72. ICT1 356 0.935 - 0.935 - - - - - - - immature colon carcinoma transcript 1
73. si:dkey-254e13.6 ENSDARG00000088301 191 0.929 - - - - - 0.929 - - - si:dkey-254e13.6 [Source:ZFIN;Acc:ZDB-GENE-070705-420]
74. coro6 ENSDARG00000102272 76 0.92 - - - - - 0.920 - - - coronin 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1202]
75. tnni3k ENSDARG00000086933 37 0.919 - - - - - 0.919 - - - TNNI3 interacting kinase [Source:ZFIN;Acc:ZDB-GENE-081104-399]
76. twist2 ENSDARG00000078266 499 0.917 - 0.917 - - - - - - - twist2 [Source:ZFIN;Acc:ZDB-GENE-980526-235]
77. CAPG CAPG 17 0.916 - - - - - 0.916 - - -
78. GAB3 GAB3 72 0.916 - - - - - 0.916 - - -
79. dguok ENSDARG00000075395, ENSDARG00000111034, ENSDARG00000114526 93 0.91 - - - - - 0.910 - - - deoxyguanosine kinase [Source:ZFIN;Acc:ZDB-GENE-040625-14]
80. mirlet7i 192 0.908 - - - - - 0.908 - - - microRNA let-7i
81. ZNF337_22 ZNF337_22 322 0.907 - - - - - 0.907 - - -
82. asb2b ENSDARG00000102490 311 0.905 - - - - - 0.905 - - - ankyrin repeat and SOCS box containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-20]
83. si:dkey-253d23.3 ENSDARG00000095643 66 0.902 - - - - - 0.902 - - - si:dkey-253d23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-330]
84. zgc:91811 zgc:91811 186 0.902 - - - - - 0.902 - - -
85. TMEM102 ENSDARG00000087162 312 0.901 - 0.901 - - - - - - - transmembrane protein 102 [Source:HGNC Symbol;Acc:HGNC:26722]
86. UFSP1 ENSDARG00000061610 81 0.899 - - - - - 0.899 - - - UFM1-specific peptidase 1 (non-functional) [Source:ZFIN;Acc:ZDB-GENE-070410-124]
87. ssbp3a ENSDARG00000058237 87 0.899 - - - - - 0.899 - - - single stranded DNA binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-070705-484]
88. OSBPL3 OSBPL3 145 0.899 - - - - - 0.899 - - -
89. tdrd3 ENSDARG00000025421 633 0.899 0.899 - - - - - - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
90. ppp2r3a ENSDARG00000077722 7 0.899 - - - - - 0.899 - - - protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
91. zgc:153911 ENSDARG00000002509 110 0.898 - - - - - 0.898 - - - zgc:153911 [Source:ZFIN;Acc:ZDB-GENE-061013-174]
92. phkg1b ENSDARG00000069498 43 0.896 - - - - - 0.896 - - - phosphorylase kinase, gamma 1b (muscle) [Source:ZFIN;Acc:ZDB-GENE-050522-52]
93. CABZ01059415.2 CABZ01059415.2 195 0.896 - - - - - 0.896 - - -
94. fscn2b ENSDARG00000074396 177 0.896 - - - - - 0.896 - - - fascin actin-bundling protein 2b, retinal [Source:ZFIN;Acc:ZDB-GENE-040426-1740]
95. si:dkeyp-79f12.7 si:dkeyp-79f12.7 5 0.895 - - - - - 0.895 - - -
96. htr1b ENSDARG00000053987 11 0.895 - - - - - 0.895 - - - 5-hydroxytryptamine (serotonin) receptor 1B [Source:ZFIN;Acc:ZDB-GENE-081022-141]
97. polg2 ENSDARG00000074933 117 0.893 - - - - - 0.893 - - - polymerase (DNA directed), gamma 2, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060810-116]
98. CR854923.1 CR854923.1 18 0.893 - - - - - 0.893 - - -
99. commd9 ENSDARG00000094258, ENSDARG00000111031 49 0.892 - - - - - 0.892 - - - COMM domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-070424-139]
100. sept7b ENSDARG00000052673 432 0.892 - - - - - 0.892 - - - septin 7b [Source:ZFIN;Acc:ZDB-GENE-030131-37]

There are 917 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA