Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-233e3.4

Gene Name Gene ID Reads Annotation
si:dkey-233e3.4 si:dkey-233e3.4 3










Genes with expression patterns similar to si:dkey-233e3.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-233e3.4 si:dkey-233e3.4 3 4 - 1.000 1.000 1.000 1.000 - - - -
2. itih6 ENSDARG00000056037 3 2 - 1.000 - - 1.000 - - - - inter-alpha-trypsin inhibitor heavy chain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-050603-1]
3. arrb2a ENSDARG00000039215 5 2 - 1.000 - 1.000 - - - - - arrestin, beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-29]
4. si:dkeyp-82h4.1 ENSDARG00000096463 18 2 - 1.000 - - 1.000 - - - - si:dkeyp-82h4.1 [Source:ZFIN;Acc:ZDB-GENE-120709-49]
5. zgc:112234_5 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 6 2 - 1.000 - 1.000 - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
6. zgc:152698 32 1.893 - 1.000 0.893 - - - - - - zgc:152698
7. si:ch73-94f11.5 si:ch73-94f11.5 6 1.803 - 1.000 0.803 - - - - - -
8. nmba ENSDARG00000068144 9 1.802 - - 0.848 - 0.954 - - - - neuromedin Ba [Source:ZFIN;Acc:ZDB-GENE-050419-3]
9. scg2b ENSDARG00000038574 345 1.743 - 1.000 0.743 - - - - - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
10. pdx1 ENSDARG00000002779, ENSDARG00000109275 28 1.62 - - 0.715 - 0.905 - - - - pancreatic and duodenal homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-122]
11. C2CD4C_1 C2CD4C_1 24 1.496 - - 0.786 - 0.710 - - - -
12. TMEM57 TMEM57 260 1 - 1.000 - - - - - - -
13. ITPRIPL2 88 1 - 1.000 - - - - - - - inositol 1,4,5-trisphosphate receptor interacting protein like 2
14. ODF2 ODF2 6 1 - 1.000 - - - - - - -
15. si:ch211-157l15.4 si:ch211-157l15.4 92 1 - 1.000 - - - - - - -
16. RD3L RD3L 15 1 - - - 1.000 - - - - -
17. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1 - 1.000 - - - - - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
18. abcb9 ENSDARG00000056200, ENSDARG00000109326 63 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family B (MDR/TAP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-12]
19. traf1 ENSDARG00000069482 50 1 - 1.000 - - - - - - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
20. ATP6V1C2 ENSDARG00000070440 2 1 - - - - 1.000 - - - - ATPase H+ transporting V1 subunit C2 [Source:ZFIN;Acc:ZDB-GENE-131127-65]
21. si:ch211-239j9.1 ENSDARG00000096319 27 1 - 1.000 - - - - - - - si:ch211-239j9.1 [Source:ZFIN;Acc:ZDB-GENE-120215-212]
22. CR626874.1 ENSDARG00000100141 55 1 - 1.000 - - - - - - -
23. hsp70l_1 ENSDARG00000055723 72 1 - 1.000 - - - - - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
24. si:zfos-754c12.2 ENSDARG00000089747 0 1 - - - 1.000 - - - - - si:zfos-754c12.2 [Source:ZFIN;Acc:ZDB-GENE-130531-27]
25. fam43b ENSDARG00000070222 92 1 - 1.000 - - - - - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
26. irbp 2 1 - - - - 1.000 - - - - interphotoreceptor retinoid-binding protein, transcript variant X2
27. BX000703.2 BX000703.2 10 1 - 1.000 - - - - - - -
28. ctslb ENSDARG00000039173, ENSDARG00000074306 27150 1 - 1.000 - - - - - - - cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
29. zgc:153615 ENSDARG00000038981 105 1 - 1.000 - - - - - - - zgc:153615 [Source:ZFIN;Acc:ZDB-GENE-061110-79]
30. CU457778.2 ENSDARG00000109381 2 1 - 1.000 - - - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100329258]
31. ccr6a ENSDARG00000087474 10 1 - 1.000 - - - - - - - chemokine (C-C motif) receptor 6a [Source:ZFIN;Acc:ZDB-GENE-040625-126]
32. SNORD30 SNORD30 34 1 - 1.000 - - - - - - -
33. rassf4 ENSDARG00000012460 43 1 - 1.000 - - - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
34. FAXC FAXC 102 1 - 1.000 - - - - - - -
35. si:dkey-20f20.3 si:dkey-20f20.3 7 1 - 1.000 - - - - - - -
36. CT027800.1 CT027800.1 36 1 - 1.000 - - - - - - -
37. pcdh15b ENSDARG00000008127 2 1 - - - 1.000 - - - - - protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1]
38. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 1 - 1.000 - - - - - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
39. olfm1a ENSDARG00000018270 107 1 - 1.000 - - - - - - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
40. SMARCA4 ENSDARG00000104339 48 1 - 1.000 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
41. LRRK1_1 LRRK1_1 11 1 - 1.000 - - - - - - -
42. mettl25 ENSDARG00000045754 36 1 - 1.000 - - - - - - - methyltransferase like 25 [Source:ZFIN;Acc:ZDB-GENE-041210-90]
43. si:ch211-188i4.4 5 1 - 1.000 - - - - - - - si:ch211-188i4.4, transcript variant X3
44. DUSP13 DUSP13 2 1 - 1.000 - - - - - - -
45. zgc:153681 ENSDARG00000086017 0 1 - - - 1.000 - - - - - zgc:153681 [Source:ZFIN;Acc:ZDB-GENE-060825-299]
46. CT583679.2 CT583679.2 10 1 - - - 1.000 - - - - -
47. CMKLR1_1 CMKLR1_1 2 1 - - - 1.000 - - - - -
48. hbaa2 ENSDARG00000069735 10 1 - 1.000 - - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
49. urgcp ENSDARG00000036767 6 1 - 1.000 - - - - - - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
50. pcyox1 ENSDARG00000103052 20 1 - 1.000 - - - - - - - prenylcysteine oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-98]
51. zgc:165627 zgc:165627 4 1 - 1.000 - - - - - - -
52. zgc:152968 ENSDARG00000037002 6 1 - 1.000 - - - - - - - zgc:152968 [Source:ZFIN;Acc:ZDB-GENE-061013-448]
53. si:dkey-79i2.4 ENSDARG00000094710 1 1 - - - - 1.000 - - - - si:dkey-79i2.4 [Source:ZFIN;Acc:ZDB-GENE-060503-553]
54. CABZ01008480.1 CABZ01008480.1 0 1 - 1.000 - - - - - - -
55. ABCC6 ABCC6 5 1 - 1.000 - - - - - - -
56. CR855273.1 CR855273.1 2 1 - - - 1.000 - - - - -
57. zgc:175136 ENSDARG00000103024 4 1 - - - - 1.000 - - - - zgc:175136 [Source:ZFIN;Acc:ZDB-GENE-080204-122]
58. CU652893.1 ENSDARG00000104131 3 1 - 1.000 - - - - - - -
59. erap2 ENSDARG00000098618 16 1 - 1.000 - - - - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
60. NRP2 NRP2 5 1 - - - 1.000 - - - - -
61. ptpn6 ENSDARG00000089043 168 1 - 1.000 - - - - - - - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]
62. CR792453.1 ENSDARG00000095699 4 1 - 1.000 - - - - - - -
63. gna15.3 ENSDARG00000056654, ENSDARG00000092948 9 1 - 1.000 - - - - - - - guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-050208-700]
64. RNaseP_nuc RNaseP_nuc 7 1 - 1.000 - - - - - - -
65. si:dkey-85k15.4 ENSDARG00000095047 25 1 - 1.000 - - - - - - - si:dkey-85k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-242]
66. antxr2a ENSDARG00000104118, ENSDARG00000111517 12 1 - 1.000 - - - - - - - ANTXR cell adhesion molecule 2a [Source:ZFIN;Acc:ZDB-GENE-060526-14]
67. entpd2b ENSDARG00000044795 7 1 - 1.000 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 2b [Source:ZFIN;Acc:ZDB-GENE-061013-2]
68. SLC5A10 ENSDARG00000074212 11 1 - - - - 1.000 - - - - solute carrier family 5 member 10 [Source:HGNC Symbol;Acc:HGNC:23155]
69. si:rp71-36a1.3 ENSDARG00000071662 2 1 - 1.000 - - - - - - - si:rp71-36a1.3 [Source:ZFIN;Acc:ZDB-GENE-050208-566]
70. Metazoa_SRP_15 Metazoa_SRP_15 2 1 - - - 1.000 - - - - -
71. lhcgr ENSDARG00000026081 2 1 - - - - 1.000 - - - - luteinizing hormone/choriogonadotropin receptor [Source:ZFIN;Acc:ZDB-GENE-040806-3]
72. si:ch211-244h4.1 si:ch211-244h4.1 1 1 - - - 1.000 - - - - -
73. ZNF70_9 ZNF70_9 1 1 - 1.000 - - - - - - -
74. si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 1 - 1.000 - - - - - - - si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
75. si:dkey-188p4.1 si:dkey-188p4.1 1 1 - 1.000 - - - - - - -
76. tnxb 30 1 - 1.000 - - - - - - - tenascin XB
77. si:dkey-193c22.1 ENSDARG00000093687 104 1 - 1.000 - - - - - - - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
78. AC024175.21 AC024175.21 10 1 - - - 1.000 - - - - -
79. ca10b ENSDARG00000009568 8 1 - 1.000 - - - - - - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
80. pja2 ENSDARG00000100296 1 1 - 1.000 - - - - - - - praja ring finger ubiquitin ligase 2 [Source:ZFIN;Acc:ZDB-GENE-060526-337]
81. KIF2A_1 ENSDARG00000043571 189 1 - 1.000 - - - - - - - kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
82. si:dkey-29b11.3 ENSDARG00000087388 29 1 - - - 1.000 - - - - - si:dkey-29b11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-178]
83. amy2a ENSDARG00000013856 13 1 - 1.000 - - - - - - - amylase, alpha 2A (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040426-2393]
84. PCDH10 PCDH10 7 1 - 1.000 - - - - - - -
85. si:dkey-222h21.4 1 1 - 1.000 - - - - - - - si:dkey-222h21.4
86. LRFN4 LRFN4 59 1 - 1.000 - - - - - - -
87. pdzd4 175 1 - 1.000 - - - - - - - PDZ domain containing 4, transcript variant X2
88. CR774179.1 ENSDARG00000086969 3 1 - - - 1.000 - - - - -
89. si:dkeyp-77c8.1 ENSDARG00000093940 0 1 - 1.000 - - - - - - - si:dkeyp-77c8.1 [Source:ZFIN;Acc:ZDB-GENE-090313-397]
90. si:ch211-199m9.2 si:ch211-199m9.2 9 1 - 1.000 - - - - - - -
91. tecrl2a ENSDARG00000089485 12 1 - - - - 1.000 - - - - trans-2,3-enoyl-CoA reductase-like 2a [Source:ZFIN;Acc:ZDB-GENE-131121-138]
92. si:ch73-7i4.1 ENSDARG00000094554 771 1 - 1.000 - - - - - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
93. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 - 1.000 - - - - - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
94. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
95. hfm1 ENSDARG00000104288 9 1 - - - - 1.000 - - - - HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061207-43]
96. AL954676.2 AL954676.2 50 1 - 1.000 - - - - - - -
97. chrnb3b ENSDARG00000038508 7 1 - - - - 1.000 - - - - cholinergic receptor, nicotinic, beta 3b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-030102-4]
98. si:ch211-108c6.2 14 1 - 1.000 - - - - - - - si:ch211-108c6.2
99. lrrc18b ENSDARG00000076236 5 1 - 1.000 - - - - - - - leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]
100. lsm10 5 1 - 1.000 - - - - - - - LSM10, U7 small nuclear RNA associated

There are 602 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA