Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-153k10.7

Gene Name Gene ID Reads Annotation
si:dkey-153k10.7 3 si:dkey-153k10.7, transcript variant X1










Genes with expression patterns similar to si:dkey-153k10.7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-153k10.7 3 2 - - 1.000 - - 1.000 - - - si:dkey-153k10.7, transcript variant X1
2. BX897671.1 BX897671.1 10 1.694 - - 0.967 - - 0.727 - - -
3. ZC2HC1C ENSDARG00000070526 14 1 - - 1.000 - - - - - - zinc finger, C2HC-type containing 1C [Source:ZFIN;Acc:ZDB-GENE-111020-1]
4. si:ch211-67e16.2 41 1 - - - - - 1.000 - - - si:ch211-67e16.2, transcript variant X2
5. btr32 ENSDARG00000053940 17 1 - - 1.000 - - - - - - bloodthirsty-related gene family, member 32 [Source:ZFIN;Acc:ZDB-GENE-060421-3827]
6. zgc:174680 ENSDARG00000100702 3 1 - - 1.000 - - - - - - zgc:174680 [Source:ZFIN;Acc:ZDB-GENE-080204-24]
7. dre-mir-2189 ENSDARG00000098723 9 1 - - 1.000 - - - - - - dre-mir-2189 [Source:miRBase;Acc:MI0010851]
8. mvb12bb ENSDARG00000079478 9 0.998 - - 0.998 - - - - - - multivesicular body subunit 12Bb [Source:ZFIN;Acc:ZDB-GENE-080414-2]
9. ACAP3 ACAP3 2 0.995 - - 0.995 - - - - - -
10. BX000442.2 BX000442.2 8 0.992 - - 0.992 - - - - - -
11. tmem167b ENSDARG00000059400 9 0.986 - - 0.986 - - - - - - transmembrane protein 167B [Source:ZFIN;Acc:ZDB-GENE-040808-17]
12. si:dkey-24p1.7 ENSDARG00000089404 7 0.982 - - 0.982 - - - - - - si:dkey-24p1.7 [Source:ZFIN;Acc:ZDB-GENE-121214-215]
13. si:dkey-241l7.4 ENSDARG00000089478 8 0.979 - - 0.979 - - - - - - si:dkey-241l7.4 [Source:ZFIN;Acc:ZDB-GENE-041014-238]
14. mir196a-1 ENSDARG00000083309 15 0.979 - - 0.979 - - - - - - microRNA 196a-1 [Source:ZFIN;Acc:ZDB-MIRNAG-041217-14]
15. CU655961.3 ENSDARG00000106724 14 0.976 - - 0.976 - - - - - -
16. dcun1d5 ENSDARG00000100363 3 0.967 - - 0.967 - - - - - - DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2603]
17. CABZ01088930.1 CABZ01088930.1 20 0.965 - - 0.965 - - - - - -
18. CR391998.1 ENSDARG00000091817 15 0.965 - - 0.965 - - - - - - putative protein TPRXL [Source:NCBI gene;Acc:101882255]
19. zgc:173652 22 0.964 - - 0.964 - - - - - - zgc:173652
20. si:dkey-211g8.6 ENSDARG00000063088 19 0.957 - - 0.957 - - - - - - si:dkey-211g8.6 [Source:ZFIN;Acc:ZDB-GENE-060503-813]
21. si:dkey-77p23.2 si:dkey-77p23.2 22 0.955 - - 0.955 - - - - - -
22. lhfpl2a ENSDARG00000009653 35 0.951 - - - - - 0.951 - - - LHFPL tetraspan subfamily member 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1839]
23. C22H19orf26 C22H19orf26 66 0.945 - - - - - 0.945 - - -
24. slc18b1 ENSDARG00000044047 7 0.943 - - 0.943 - - - - - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
25. crp1 ENSDARG00000071454 31 0.936 - - 0.936 - - - - - - C-reactive protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-314]
26. sorl1 ENSDARG00000013892 13 0.934 - - 0.934 - - - - - - sortilin-related receptor, L(DLR class) A repeats containing [Source:ZFIN;Acc:ZDB-GENE-050208-22]
27. atp2b1b ENSDARG00000007788 56 0.919 - - - - - 0.919 - - - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
28. HIST1H2BA_1 ENSDARG00000116654 37 0.919 - - - - - 0.919 - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
29. pcsk9 ENSDARG00000074185 8 0.919 - - - - - 0.919 - - - proprotein convertase subtilisin/kexin type 9 [Source:ZFIN;Acc:ZDB-GENE-060927-1]
30. wu:fb39e10 wu:fb39e10 23 0.919 - - - - - 0.919 - - -
31. CT027705.3 CT027705.3 9 0.919 - - - - - 0.919 - - -
32. SPAG17 SPAG17 31 0.919 - - - - - 0.919 - - -
33. ankrd37 ENSDARG00000056376 131 0.919 - - - - - 0.919 - - - ankyrin repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-070308-1]
34. sst2 ENSDARG00000014190 617 0.919 - - - - - 0.919 - - - somatostatin 2 [Source:ZFIN;Acc:ZDB-GENE-010219-2]
35. si:dkey-238m4.1 si:dkey-238m4.1 71 0.919 - - - - - 0.919 - - -
36. gpr75 ENSDARG00000098526 32 0.912 - - 0.912 - - - - - - G protein-coupled receptor 75 [Source:ZFIN;Acc:ZDB-GENE-100316-3]
37. QRFPR ENSDARG00000101969 47 0.908 - - - - - 0.908 - - - pyroglutamylated RFamide peptide receptor [Source:HGNC Symbol;Acc:HGNC:15565]
38. COPS6 5 0.893 - - 0.893 - - - - - - COP9 signalosome subunit 6
39. SPG21 ENSDARG00000007760 645 0.892 - - 0.892 - - - - - - spastic paraplegia 21 (autosomal recessive, Mast syndrome) [Source:ZFIN;Acc:ZDB-GENE-040426-2722]
40. si:ch211-190k17.13 si:ch211-190k17.13 48 0.89 - - 0.890 - - - - - -
41. stx17 ENSDARG00000006869 24 0.888 - - 0.888 - - - - - - syntaxin 17 [Source:ZFIN;Acc:ZDB-GENE-041114-164]
42. rrnad1 ENSDARG00000089033 69 0.886 - - - - - 0.886 - - - ribosomal RNA adenine dimethylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-515]
43. si:dkey-20i20.9 ENSDARG00000092027 23 0.883 - - 0.883 - - - - - - si:dkey-20i20.9 [Source:ZFIN;Acc:ZDB-GENE-060503-152]
44. si:ch1073-181h11.4 ENSDARG00000098347 86 0.875 - - - - - 0.875 - - - si:ch1073-181h11.4 [Source:ZFIN;Acc:ZDB-GENE-091204-426]
45. CR376848.1 ENSDARG00000115549 149 0.875 - - - - - 0.875 - - - neutral cholesterol ester hydrolase 1-like [Source:NCBI gene;Acc:797436]
46. P2RY1 ENSDARG00000105281 45 0.874 - - 0.874 - - - - - - purinergic receptor P2Y1 [Source:ZFIN;Acc:ZDB-GENE-121004-2]
47. cdk5r1a ENSDARG00000037916 46 0.871 - - - - - 0.871 - - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
48. zgc:153116 ENSDARG00000077205 7 0.87 - - 0.870 - - - - - - zgc:153116 [Source:ZFIN;Acc:ZDB-GENE-060825-107]
49. si:ch211-196f5.9 ENSDARG00000096451 70 0.869 - - - - - 0.869 - - - si:ch211-196f5.9 [Source:ZFIN;Acc:ZDB-GENE-120709-32]
50. si:ch211-117c9.5 ENSDARG00000071235 154 0.865 - - - - - 0.865 - - - si:ch211-117c9.5 [Source:ZFIN;Acc:ZDB-GENE-110408-2]
51. insl5a ENSDARG00000070966, ENSDARG00000112563 45 0.86 - - 0.860 - - - - - - insulin-like 5a [Source:ZFIN;Acc:ZDB-GENE-050310-4]
52. si:ch211-145h19.5 ENSDARG00000102884 5 0.856 - - 0.856 - - - - - - si:ch211-145h19.5 [Source:ZFIN;Acc:ZDB-GENE-110914-112]
53. kif20a ENSDARG00000044491 12 0.855 - - 0.855 - - - - - - kinesin family member 20A [Source:ZFIN;Acc:ZDB-GENE-050522-252]
54. CSMD3 CSMD3 0 0.854 - - 0.854 - - - - - -
55. retsatl ENSDARG00000034989 41 0.854 - - 0.854 - - - - - - retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
56. poln ENSDARG00000103961, ENSDARG00000113911 57 0.848 - - - - - 0.848 - - - polymerase (DNA directed) nu [Source:ZFIN;Acc:ZDB-GENE-100917-1]
57. cyp3c4 ENSDARG00000070021 95 0.848 - - 0.848 - - - - - - cytochrome P450, family 3, subfamily C, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-060929-96]
58. l3mbtl1b ENSDARG00000074346 120 0.847 - - - - - 0.847 - - - l(3)mbt-like 1b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-100922-38]
59. elovl4b ENSDARG00000027495 107 0.846 - - 0.846 - - - - - - ELOVL fatty acid elongase 4b [Source:ZFIN;Acc:ZDB-GENE-030131-7672]
60. tmem200a ENSDARG00000031540 52 0.845 - - 0.845 - - - - - - transmembrane protein 200A [Source:ZFIN;Acc:ZDB-GENE-040724-81]
61. lcmt2 ENSDARG00000000747, ENSDARG00000110257 97 0.837 - - 0.837 - - - - - - leucine carboxyl methyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-110714-2]
62. CENPA 63 0.835 - - 0.835 - - - - - - histone H3-like centromeric protein A
63. GJC1 GJC1 44 0.831 - - - - - 0.831 - - -
64. ankrd55 ENSDARG00000099182 50 0.826 - - - - - 0.826 - - - ankyrin repeat domain 55 [Source:ZFIN;Acc:ZDB-GENE-080104-7]
65. faima ENSDARG00000005828 154 0.821 - - 0.821 - - - - - - Fas apoptotic inhibitory molecule a [Source:ZFIN;Acc:ZDB-GENE-040718-323]
66. pik3cg ENSDARG00000017757 157 0.819 - - 0.819 - - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040426-2532]
67. CABZ01022575.2 CABZ01022575.2 83 0.818 - - - - - 0.818 - - -
68. trmt1 ENSDARG00000010978 72 0.818 - - - - - 0.818 - - - tRNA methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060810-40]
69. mhc1zea ENSDARG00000001470 184 0.816 - - - - - 0.816 - - - major histocompatibility complex class I ZEA [Source:ZFIN;Acc:ZDB-GENE-070705-176]
70. SNORA31 SNORA31 23 0.816 - - 0.816 - - - - - -
71. cep70 ENSDARG00000076965 140 0.796 - - - - - 0.796 - - - centrosomal protein 70 [Source:ZFIN;Acc:ZDB-GENE-070705-311]
72. fam105ba fam105ba 93 0.794 - - - - - 0.794 - - -
73. AP5Z1 ENSDARG00000078111 91 0.789 - - 0.789 - - - - - - adaptor related protein complex 5 subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-120508-2]
74. MAATS1 ENSDARG00000006292 59 0.782 - - - - - 0.782 - - - MYCBP-associated, testis expressed 1 [Source:ZFIN;Acc:ZDB-GENE-070912-489]
75. si:ch73-27e22.2 ENSDARG00000092266 8 0.781 - - 0.781 - - - - - - si:ch73-27e22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-230]
76. fam151b ENSDARG00000020024 255 0.781 - - - - - 0.781 - - - family with sequence similarity 151, member B [Source:ZFIN;Acc:ZDB-GENE-040801-38]
77. FHOD3 FHOD3 422 0.777 - - - - - 0.777 - - -
78. ARHGAP42 ARHGAP42 53 0.775 - - - - - 0.775 - - -
79. golga2 ENSDARG00000063197 30 0.775 - - - - - 0.775 - - - golgin A2 [Source:ZFIN;Acc:ZDB-GENE-081030-1]
80. zte25 zte25 29 0.775 - - - - - 0.775 - - -
81. lrguk ENSDARG00000069698 5 0.775 - - - - - 0.775 - - - leucine-rich repeats and guanylate kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-232]
82. atr ENSDARG00000079625 231 0.775 - - - - - 0.775 - - - ATR serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-070912-458]
83. CABZ01055343.4 CABZ01055343.4 9 0.775 - - - - - 0.775 - - -
84. HNRNPUL2 HNRNPUL2 110 0.775 - - - - - 0.775 - - -
85. Metazoa_SRP_25 Metazoa_SRP_25 13 0.775 - - - - - 0.775 - - -
86. si:ch73-27j14.2 si:ch73-27j14.2 32 0.775 - - - - - 0.775 - - -
87. map2k4a ENSDARG00000063583 38 0.775 - - - - - 0.775 - - - mitogen-activated protein kinase kinase 4a [Source:ZFIN;Acc:ZDB-GENE-060512-98]
88. NFATC4 ENSDARG00000054162 44 0.775 - - - - - 0.775 - - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
89. ptk2ba ENSDARG00000022841 19 0.775 - - - - - 0.775 - - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
90. ECT2L 39 0.775 - - - - - 0.775 - - - epithelial cell transforming 2 like, transcript variant X4
91. si:dkey-13d5.1 si:dkey-13d5.1 3 0.775 - - - - - 0.775 - - -
92. CABZ01088933.1 CABZ01088933.1 40 0.775 - - - - - 0.775 - - -
93. si:dkey-89j23.3 si:dkey-89j23.3 9 0.775 - - - - - 0.775 - - -
94. dis3l ENSDARG00000053200, ENSDARG00000112358 267 0.772 - - - - - 0.772 - - - DIS3 like exosome 3'-5' exoribonuclease [Source:ZFIN;Acc:ZDB-GENE-070209-95]
95. CR391967.1 CR391967.1 135 0.77 - - - - - 0.770 - - -
96. arrdc1b ENSDARG00000079839 236 0.768 - - 0.768 - - - - - - arrestin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080515-2]
97. zgc:66472 ENSDARG00000075916 635 0.761 - - - - - 0.761 - - - zgc:66472 [Source:ZFIN;Acc:ZDB-GENE-030131-5705]
98. wdr92 ENSDARG00000037334 329 0.759 - - - - - 0.759 - - - WD repeat domain 92 [Source:ZFIN;Acc:ZDB-GENE-050417-93]
99. PEG3_12 PEG3_12 128 0.759 - - - - - 0.759 - - -
100. spata17 ENSDARG00000054414 64 0.758 - - - - - 0.758 - - - spermatogenesis associated 17 [Source:ZFIN;Acc:ZDB-GENE-111214-1]

There are 35 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA