Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-109j17.5

Gene Name Gene ID Reads Annotation
si:dkey-109j17.5 ENSDARG00000104891 2 si:dkey-109j17.5 [Source:ZFIN;Acc:ZDB-GENE-090313-173]










Genes with expression patterns similar to si:dkey-109j17.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-109j17.5 ENSDARG00000104891 2 4 - - 1.000 - - 1.000 - 1.000 1.000 si:dkey-109j17.5 [Source:ZFIN;Acc:ZDB-GENE-090313-173]
2. cep89 ENSDARG00000005092 4 2 - - - - - 1.000 - - 1.000 centrosomal protein 89 [Source:ZFIN;Acc:ZDB-GENE-040426-1210]
3. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 1.893 - - 0.893 - - 1.000 - - - v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
4. asb10 ENSDARG00000099461 27 1.749 - - 1.000 - - 0.749 - - - ankyrin repeat and SOCS box containing 10 [Source:ZFIN;Acc:ZDB-GENE-060929-1106]
5. si:ch211-3o3.8 si:ch211-3o3.8 2 1.746 - - 0.746 - - 1.000 - - -
6. GABRA3 ENSDARG00000090883 5 1.744 - - - - - 1.000 - - 0.744 gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
7. si:dkeyp-104b3.21 ENSDARG00000103964 6 1.744 - - - - - 1.000 - - 0.744 si:dkeyp-104b3.21 [Source:ZFIN;Acc:ZDB-GENE-070912-626]
8. si:ch211-274k16.6 si:ch211-274k16.6 26 1.744 - - - - - 1.000 - - 0.744
9. wnt7ba ENSDARG00000022858 1 1.744 - - 1.000 - - - - - 0.744 wingless-type MMTV integration site family, member 7Ba [Source:ZFIN;Acc:ZDB-GENE-041210-178]
10. PPAPDC3 PPAPDC3 14 1.744 - - - - - 1.000 - - 0.744
11. C3H19orf66 C3H19orf66 20 1.7 - - - - - 1.000 - 0.700 -
12. si:dkeyp-35f12.3 si:dkeyp-35f12.3 3 1 - - - - - 1.000 - - -
13. zgc:136678 zgc:136678 2 1 - - - - - 1.000 - - -
14. CR855338.2 CR855338.2 0 1 - - - - - 1.000 - - -
15. opn4a ENSDARG00000022098, ENSDARG00000110010 3 1 - - - - - 1.000 - - - opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
16. gyg2 ENSDARG00000033380 12 1 - - - - - 1.000 - - - glycogenin 2 [Source:ZFIN;Acc:ZDB-GENE-080723-74]
17. si:dkey-28d5.7 si:dkey-28d5.7 2 1 - - - - - 1.000 - - -
18. st8sia1 ENSDARG00000098221 34 1 - - - - - 1.000 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
19. BX005356.3 BX005356.3 4 1 - - 1.000 - - - - - -
20. uts2a ENSDARG00000053854, ENSDARG00000116102 16 1 - - - - - 1.000 - - - urotensin 2, alpha [Source:ZFIN;Acc:ZDB-GENE-040630-11]
21. nitr3a_1 ENSDARG00000110676 44 1 - - - - - 1.000 - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
22. CABZ01012885.1 ENSDARG00000100377 0 1 - - - - - 1.000 - - - extracellular calcium-sensing receptor-like [Source:NCBI gene;Acc:100007225]
23. si:dkey-24c2.6 si:dkey-24c2.6 1 1 - - - - - 1.000 - - -
24. si:ch211-283l16.1 ENSDARG00000112586 131 1 - - - - - 1.000 - - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
25. slc2a11l ENSDARG00000062873 1 1 - - - - - 1.000 - - - solute carrier family 2 (facilitated glucose transporter), member 11-like [Source:ZFIN;Acc:ZDB-GENE-061215-118]
26. igf1 ENSDARG00000094132 59 1 - - - - - 1.000 - - - insulin-like growth factor 1 [Source:ZFIN;Acc:ZDB-GENE-010607-2]
27. zgc:171759_2 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 48 1 - - - - - 1.000 - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
28. cbln2a ENSDARG00000074601 12 1 - - 1.000 - - - - - - cerebellin 2a precursor [Source:ZFIN;Acc:ZDB-GENE-070912-591]
29. ENDOD1_3 ENDOD1_3 9 1 - - - - - 1.000 - - -
30. si:dkey-84h14.3 si:dkey-84h14.3 3 1 - - 1.000 - - - - - -
31. klhl5 ENSDARG00000062122, ENSDARG00000114563, ENSDARG00000115909 27 1 - - - - - 1.000 - - - kelch-like family member 5 [Source:ZFIN;Acc:ZDB-GENE-080424-7]
32. grin2cb ENSDARG00000077560 9 1 - - - - - 1.000 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb [Source:ZFIN;Acc:ZDB-GENE-100308-2]
33. si:dkey-7i4.1 ENSDARG00000086897 2 1 - - 1.000 - - - - - - si:dkey-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-081028-64]
34. si:ch211-202m22.1 ENSDARG00000094491 24 1 - - - - - 1.000 - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
35. CU633740.2 CU633740.2 16 1 - - - - - 1.000 - - -
36. grpr ENSDARG00000056620 66 1 - - - - - 1.000 - - - gastrin-releasing peptide receptor [Source:ZFIN;Acc:ZDB-GENE-081015-4]
37. phlpp2 ENSDARG00000090255 1 1 - - - - - 1.000 - - - PH domain and leucine rich repeat protein phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-070719-3]
38. ZNF541 ENSDARG00000052188 0 1 - - - - - 1.000 - - - zinc finger protein 541 [Source:ZFIN;Acc:ZDB-GENE-060526-239]
39. zgc:113030 ENSDARG00000069869 53 1 - - - - - 1.000 - - - zgc:113030 [Source:ZFIN;Acc:ZDB-GENE-050522-528]
40. tceanc2 ENSDARG00000062919 32 1 - - - - - 1.000 - - - transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
41. BX322608.1 ENSDARG00000111690 326 1 - - - - - 1.000 - - -
42. si:ch211-13b16.1 si:ch211-13b16.1 1 1 - - 1.000 - - - - - -
43. CMA1_9 CMA1_9 1 1 - - - - - 1.000 - - -
44. si:ch211-105d18.7 si:ch211-105d18.7 6 1 - - - - - 1.000 - - -
45. asic4a ENSDARG00000025162 25 1 - - - - - 1.000 - - - acid-sensing (proton-gated) ion channel family member 4a [Source:ZFIN;Acc:ZDB-GENE-040513-5]
46. RAC1_1 RAC1_1 0 1 - - 1.000 - - - - - -
47. zgc:175284 ENSDARG00000078159 29 1 - - - - - 1.000 - - - zgc:175284 [Source:ZFIN;Acc:ZDB-GENE-080219-49]
48. si:dkey-162b3.5 si:dkey-162b3.5 24 1 - - - - - 1.000 - - -
49. CR339051.1 CR339051.1 9 1 - - - - - 1.000 - - -
50. si:dkey-17e6.1 si:dkey-17e6.1 1 1 - - 1.000 - - - - - -
51. RNF14_3 RNF14_3 15 1 - - - - - 1.000 - - -
52. ZP2_2 ZP2_2 28 1 - - - - - 1.000 - - -
53. C24H8orf34 C24H8orf34 1 1 - - - - - 1.000 - - -
54. fam160b2 ENSDARG00000060029, ENSDARG00000115630 221 1 - - - - - 1.000 - - - family with sequence similarity 160, member B2 [Source:ZFIN;Acc:ZDB-GENE-061110-76]
55. zgc:153846 ENSDARG00000040738 1 1 - - - - - 1.000 - - - zgc:153846 [Source:ZFIN;Acc:ZDB-GENE-060929-898]
56. si:ch211-262l19.1 si:ch211-262l19.1 0 1 - - - - - 1.000 - - -
57. si:dkey-2j6.2 si:dkey-2j6.2 5 1 - - 1.000 - - - - - -
58. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 1 - - - - - 1.000 - - -
59. si:dkey-259p7.1 si:dkey-259p7.1 59 1 - - - - - 1.000 - - -
60. si:dkey-233e3.2 3 1 - - 1.000 - - - - - - si:dkey-233e3.2, transcript variant X1
61. r3hdm4 ENSDARG00000063254 201 1 - - - - - 1.000 - - - R3H domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1352]
62. DMXL2 ENSDARG00000091293 3 1 - - - - - 1.000 - - - Dmx-like 2 [Source:ZFIN;Acc:ZDB-GENE-031007-6]
63. cnn1a ENSDARG00000017193 6 1 - - 1.000 - - - - - - calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
64. CABZ01112732.1 ENSDARG00000068453 4 1 - - - - - 1.000 - - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
65. nr4a2a ENSDARG00000017007 140 1 - - - - - 1.000 - - - nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
66. polg ENSDARG00000060951 33 1 - - - - - 1.000 - - - polymerase (DNA directed), gamma [Source:ZFIN;Acc:ZDB-GENE-060303-1]
67. asphd1 ENSDARG00000075813, ENSDARG00000110592 54 1 - - - - - 1.000 - - - aspartate beta-hydroxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-091204-62]
68. FP236810.3 FP236810.3 1 1 - - - - - 1.000 - - -
69. zbtb16a ENSDARG00000007184 6 1 - - 1.000 - - - - - - zinc finger and BTB domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-030131-1989]
70. BX255935.2 BX255935.2 0 1 - - 1.000 - - - - - -
71. acp6 ENSDARG00000040064 197 1 - - - - - 1.000 - - - acid phosphatase 6, lysophosphatidic [Source:ZFIN;Acc:ZDB-GENE-050208-290]
72. sh2d4b sh2d4b 1 1 - - - - - 1.000 - - -
73. si:ch73-226l13.2 ENSDARG00000095939 0 1 - - - - - 1.000 - - - si:ch73-226l13.2 [Source:ZFIN;Acc:ZDB-GENE-110411-18]
74. scn1a_1 2 1 - - 1.000 - - - - - - sodium channel, voltage-gated, type I, alpha, transcript variant X1
75. si:dkey-46c2.2 si:dkey-46c2.2 2 1 - - 1.000 - - - - - -
76. FP085391.3 FP085391.3 14 1 - - - - - 1.000 - - -
77. samd10b ENSDARG00000094377 18 1 - - - - - 1.000 - - - sterile alpha motif domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-090312-179]
78. si:ch211-260c23.1 13 1 - - - - - 1.000 - - - si:ch211-260c23.1, transcript variant X7
79. tmprss4b ENSDARG00000012860 6 1 - - 1.000 - - - - - - transmembrane serine protease 4b [Source:ZFIN;Acc:ZDB-GENE-030131-5862]
80. rxfp1 ENSDARG00000090071 6 1 - - - - - 1.000 - - - relaxin family peptide receptor 1 [Source:ZFIN;Acc:ZDB-GENE-110125-1]
81. gdpd3b ENSDARG00000006944 19 1 - - 1.000 - - - - - - glycerophosphodiester phosphodiesterase domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-121210-2]
82. si:dkey-23a23.1 ENSDARG00000094824 1 1 - - - - - 1.000 - - - si:dkey-23a23.1 [Source:ZFIN;Acc:ZDB-GENE-060503-65]
83. htr1aa ENSDARG00000093745 0 1 - - - - - 1.000 - - - 5-hydroxytryptamine (serotonin) receptor 1A a [Source:ZFIN;Acc:ZDB-GENE-071203-1]
84. zmat4a ENSDARG00000092987, ENSDARG00000111611 1 1 - - 1.000 - - - - - - zinc finger, matrin-type 4a [Source:ZFIN;Acc:ZDB-GENE-081104-333]
85. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1 - - - - - 1.000 - - - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
86. BX548000.1 ENSDARG00000099044 45 1 - - - - - 1.000 - - -
87. si:ch211-12e1.5 si:ch211-12e1.5 14 1 - - - - - 1.000 - - -
88. crygmxl1 ENSDARG00000018797 7 1 - - 1.000 - - - - - - crystallin, gamma MX, like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-392]
89. BX649431.1 ENSDARG00000098522 13 1 - - 1.000 - - - - - -
90. IGFN1_2 IGFN1_2 3 1 - - - - - 1.000 - - -
91. fsd1l ENSDARG00000059432, ENSDARG00000113444, ENSDARG00000114848 3 1 - - - - - 1.000 - - - fibronectin type III and SPRY domain containing 1-like [Source:ZFIN;Acc:ZDB-GENE-070501-9]
92. cacng7b ENSDARG00000070624 18 1 - - - - - 1.000 - - - calcium channel, voltage-dependent, gamma subunit 7b [Source:ZFIN;Acc:ZDB-GENE-100921-51]
93. nbn ENSDARG00000040303 43 1 - - - - - 1.000 - - - nibrin [Source:ZFIN;Acc:ZDB-GENE-041008-35]
94. vwc2 ENSDARG00000076495 22 1 - - - - - 1.000 - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
95. si:ch73-346o4.3 si:ch73-346o4.3 29 1 - - - - - 1.000 - - -
96. rrh ENSDARG00000039534 4 1 - - - - - 1.000 - - - retinal pigment epithelium-derived rhodopsin homolog [Source:ZFIN;Acc:ZDB-GENE-040912-94]
97. BMP10 ENSDARG00000061769 3 1 - - 1.000 - - - - - - bone morphogenetic protein 10 [Source:ZFIN;Acc:ZDB-GENE-060526-211]
98. C14orf80 C14orf80 20 1 - - - - - 1.000 - - -
99. MFAP4_5 MFAP4_5 4 1 - - - - - 1.000 - - -
100. si:dkey-167k11.3 si:dkey-167k11.3 3 1 - - - - - 1.000 - - -

There are 553 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA