Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch73-18b11.1

Gene Name Gene ID Reads Annotation
si:ch73-18b11.1 si:ch73-18b11.1 3840










Genes with expression patterns similar to si:ch73-18b11.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-18b11.1 si:ch73-18b11.1 3840 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 2.364 - - 0.850 - - - - 0.795 0.719 chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
3. ncaph ENSDARG00000061468, ENSDARG00000113773 1401 2.328 - 0.716 - - 0.895 - - 0.717 - non-SMC condensin I complex, subunit H [Source:ZFIN;Acc:ZDB-GENE-070112-652]
4. rassf1 ENSDARG00000004840 1248 1.922 - - 0.930 - - - 0.992 - - Ras association (RalGDS/AF-6) domain family 1 [Source:ZFIN;Acc:ZDB-GENE-040912-14]
5. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 1.9 - - 0.911 - - - 0.989 - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
6. specc1la ENSDARG00000006719, ENSDARG00000115728 1079 1.893 - - - - 0.898 - 0.995 - - sperm antigen with calponin homology and coiled-coil domains 1-like a [Source:ZFIN;Acc:ZDB-GENE-060810-139]
7. ppapdc1b ppapdc1b 2866 1.886 - - 0.901 - - - 0.985 - -
8. nrf1 ENSDARG00000000018 4683 1.881 - - - - 0.899 - 0.982 - - nuclear respiratory factor 1 [Source:ZFIN;Acc:ZDB-GENE-001221-1]
9. lrp1b lrp1b 3216 1.872 - - - - 0.895 - 0.977 - -
10. CORO1C CORO1C 5554 1.859 - - - - 0.881 - 0.978 - -
11. rqcd1 2301 1.838 - - 0.940 - 0.898 - - - - RCD1 required for cell differentiation1 homolog (S. pombe)
12. ubtf ENSDARG00000035066 4070 1.834 - - 0.925 - 0.909 - - - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
13. atpif1a 6030 1.827 - - 0.909 - 0.918 - - - - ATPase inhibitory factor 1a
14. SEC24A ENSDARG00000104375 2614 1.817 - - 0.837 - - - 0.980 - - SEC24 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-120926-1]
15. CWC15 ENSDARG00000013382 8969 1.815 - - - - 0.858 - 0.957 - - CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
16. slc35b1 ENSDARG00000038213 465 1.811 - - - - - 0.816 0.995 - - solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]
17. tspan7b ENSDARG00000008407 5740 1.788 - - 0.914 - 0.874 - - - - tetraspanin 7b [Source:ZFIN;Acc:ZDB-GENE-040927-5]
18. gapdhs ENSDARG00000039914 8760 1.758 - - - - 0.790 - 0.968 - - glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
19. lrba ENSDARG00000031108 2136 1.757 - 0.787 - - - - 0.970 - - LPS-responsive vesicle trafficking, beach and anchor containing [Source:ZFIN;Acc:ZDB-GENE-090311-19]
20. pcbp2 ENSDARG00000099039 4248 1.754 - - 0.929 - - - 0.825 - - poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]
21. cstf3 ENSDARG00000018904 6111 1.753 - - - - 0.779 - 0.974 - - cleavage stimulation factor, 3' pre-RNA, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1997]
22. mpi ENSDARG00000030786 3052 1.751 - 0.770 - - - - 0.981 - - mannose phosphate isomerase [Source:ZFIN;Acc:ZDB-GENE-050904-6]
23. CPEB2 ENSDARG00000052604 2646 1.739 - 0.833 - - 0.906 - - - - cytoplasmic polyadenylation element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-130530-639]
24. cdc14b ENSDARG00000021483 4958 1.731 - - 0.829 - 0.902 - - - - cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
25. arid1aa ENSDARG00000101710 3644 1.715 - - - - - - 0.986 - 0.729 AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
26. mgll ENSDARG00000036820 747 1.706 - 0.727 - - - - 0.979 - - monoglyceride lipase [Source:ZFIN;Acc:ZDB-GENE-031006-9]
27. skp1 ENSDARG00000003151 8172 1.702 - - - - - - 0.917 - 0.785 S-phase kinase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1707]
28. nme3 ENSDARG00000100990 3889 1.694 - - 0.926 - 0.768 - - - - NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
29. cab39l1 ENSDARG00000021374, ENSDARG00000112995 2033 1.692 - - 0.926 - - 0.766 - - - calcium binding protein 39, like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2897]
30. taf6l ENSDARG00000079684 1408 1.681 - - 0.928 - - - - 0.753 - TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-6789]
31. fbxw11b ENSDARG00000017230, ENSDARG00000112841 2593 1.676 - - 0.925 - - 0.751 - - - F-box and WD repeat domain containing 11b [Source:ZFIN;Acc:ZDB-GENE-040426-2903]
32. CU302436.2 CU302436.2 587 1.675 - 0.750 0.925 - - - - - -
33. AL844567.1 AL844567.1 1605 1.668 - - 0.938 0.730 - - - - -
34. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 1.665 - - - - - - 0.923 - 0.742 RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
35. nckipsd ENSDARG00000079475 777 1.665 - 0.742 0.923 - - - - - - NCK interacting protein with SH3 domain [Source:ZFIN;Acc:ZDB-GENE-130326-2]
36. e2f4 ENSDARG00000101578, ENSDARG00000109320 1783 1.661 - - 0.932 - - - - - 0.729 E2F transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2773]
37. thrap3b ENSDARG00000098228 4396 1.655 - 0.775 0.880 - - - - - - thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
38. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 1.654 - - 0.944 - - - - - 0.710 transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
39. gna13a ENSDARG00000073765 925 1.652 - - 0.938 - - 0.714 - - - guanine nucleotide binding protein (G protein), alpha 13a [Source:ZFIN;Acc:ZDB-GENE-030131-5024]
40. pdlim1 ENSDARG00000019845 5765 1.635 - 0.830 0.805 - - - - - - PDZ and LIM domain 1 (elfin) [Source:ZFIN;Acc:ZDB-GENE-030131-5227]
41. zgc:113054 ENSDARG00000053483 1079 1.631 - 0.717 0.914 - - - - - - zgc:113054 [Source:ZFIN;Acc:ZDB-GENE-050320-9]
42. rhoaa ENSDARG00000026845 6900 1.626 - - - - 0.745 - 0.881 - - ras homolog gene family, member Aa [Source:ZFIN;Acc:ZDB-GENE-040426-2150]
43. ppp2r2d ENSDARG00000102009 5710 1.611 - - - - 0.897 0.714 - - - protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
44. unc119.1 ENSDARG00000009629 1193 1.607 - 0.712 - - 0.895 - - - - unc-119 homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030219-130]
45. snx3 ENSDARG00000008678 3430 1.604 - 0.725 - - 0.879 - - - - sorting nexin 3 [Source:ZFIN;Acc:ZDB-GENE-030131-921]
46. slc47a1 ENSDARG00000046012 1426 1.603 - 0.706 - - 0.897 - - - - solute carrier family 47 (multidrug and toxin extrusion), member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-20]
47. adnpa ENSDARG00000062002, ENSDARG00000115617 2009 1.602 - - - 0.705 0.897 - - - - activity-dependent neuroprotector homeobox a [Source:ZFIN;Acc:ZDB-GENE-061215-112]
48. SI:DKEY-209E8.1 SI:DKEY-209E8.1 1143 1.594 - 0.700 - - 0.894 - - - -
49. ppp5c ENSDARG00000034313 8794 1.585 - - 0.794 - - - 0.791 - - protein phosphatase 5, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050327-75]
50. stmn1a ENSDARG00000004169 21169 1.561 - - - - 0.845 - - - 0.716 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
51. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 1.543 - - 0.809 0.734 - - - - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
52. cldn5a ENSDARG00000043716 3865 1.543 - - 0.811 - - - - - 0.732 claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
53. rpl13 ENSDARG00000099380 20663 1.53 - - - - 0.824 - 0.706 - - ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-031007-1]
54. zgc:101846 15202 1.53 - - - - 0.717 - 0.813 - - zgc:101846
55. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 1.514 - 0.741 - 0.773 - - - - - stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
56. ddx5 ENSDARG00000038068 35302 1.502 - - - 0.708 - - 0.794 - - DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]
57. dnajc9 ENSDARG00000031293, ENSDARG00000111989 4082 1.499 0.785 - - - 0.714 - - - - DnaJ (Hsp40) homolog, subfamily C, member 9 [Source:ZFIN;Acc:ZDB-GENE-040718-130]
58. fth1a ENSDARG00000015551 48001 1.487 - - - - 0.747 - 0.740 - - ferritin, heavy polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-000831-2]
59. tgif1 ENSDARG00000059337 4020 1.484 - - - 0.716 0.768 - - - - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
60. fam32al fam32al 5716 1.461 - 0.740 - - - - - - 0.721
61. ilf3b ENSDARG00000105177 9473 1.458 - - 0.735 0.723 - - - - - interleukin enhancer binding factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-587]
62. sumo2b ENSDARG00000102741 18514 1.446 - - - - 0.733 - 0.713 - - small ubiquitin-like modifier 2b [Source:ZFIN;Acc:ZDB-GENE-040801-7]
63. rlf ENSDARG00000063553 1339 1.446 0.729 0.717 - - - - - - - rearranged L-myc fusion [Source:ZFIN;Acc:ZDB-GENE-050208-257]
64. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.44 - - - - 0.726 - - - 0.714 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
65. C13H6orf203 C13H6orf203 881 0.998 - - - - - - 0.998 - -
66. trappc3 ENSDARG00000045364 1021 0.997 - - - - - - 0.997 - - trafficking protein particle complex 3 [Source:ZFIN;Acc:ZDB-GENE-040801-120]
67. ino80c ENSDARG00000055719 1512 0.997 - - - - - - 0.997 - - INO80 complex subunit C [Source:ZFIN;Acc:ZDB-GENE-040625-97]
68. pam ENSDARG00000100170 2442 0.997 - - - - - - 0.997 - - peptidylglycine alpha-amidating monooxygenase [Source:ZFIN;Acc:ZDB-GENE-090313-384]
69. calub ENSDARG00000005115 1478 0.997 - - - - - - 0.997 - - calumenin b [Source:ZFIN;Acc:ZDB-GENE-040426-1251]
70. tmem104 ENSDARG00000088560 859 0.996 - - - - - - 0.996 - - transmembrane protein 104 [Source:ZFIN;Acc:ZDB-GENE-070822-4]
71. NBR1 NBR1 752 0.996 - - - - - - 0.996 - -
72. TPGS1 TPGS1 228 0.996 - - - - - - 0.996 - -
73. cap1 ENSDARG00000016350 891 0.996 - - - - - - 0.996 - - CAP, adenylate cyclase-associated protein 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6459]
74. nlk1 ENSDARG00000006566 1123 0.996 - - - - - - 0.996 - - nemo-like kinase, type 1 [Source:ZFIN;Acc:ZDB-GENE-040701-1]
75. pdcd10b ENSDARG00000012591 3395 0.996 - - - - - - 0.996 - - programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
76. CABZ01115256.1 CABZ01115256.1 683 0.996 - - - - - - 0.996 - -
77. IGSF8 ENSDARG00000038467 2102 0.996 - - - - - - 0.996 - - immunoglobulin superfamily, member 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2444]
78. ARSB ENSDARG00000108788 774 0.996 - - - - - - 0.996 - - arylsulfatase B [Source:HGNC Symbol;Acc:HGNC:714]
79. thbs4a ENSDARG00000102777 625 0.996 - - - - - - 0.996 - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
80. ncoa6 ENSDARG00000071272 759 0.996 - - - - - - 0.996 - - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
81. rnf168 ENSDARG00000112483 594 0.995 - - - - - - 0.995 - - ring finger protein 168 [Source:ZFIN;Acc:ZDB-GENE-030131-6013]
82. gnpat ENSDARG00000074401 479 0.995 - - - - - - 0.995 - - glyceronephosphate O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-040618-4]
83. cacna1ba ENSDARG00000021735 870 0.995 - - - - - - 0.995 - - calcium channel, voltage-dependent, N type, alpha 1B subunit, a [Source:ZFIN;Acc:ZDB-GENE-060531-44]
84. CU019646.2 CU019646.2 519 0.995 - - - - - - 0.995 - -
85. rtdr1 rtdr1 158 0.995 - - - - - - 0.995 - -
86. timeless ENSDARG00000078497 1114 0.995 - - - - - - 0.995 - - timeless circadian clock [Source:ZFIN;Acc:ZDB-GENE-030131-8978]
87. ENSDARG00000078787 ENSDARG00000078787 97 0.995 - - - - - - 0.995 - -
88. ech1 ENSDARG00000012915, ENSDARG00000109720 1409 0.995 - - - - - - 0.995 - - enoyl CoA hydratase 1, peroxisomal [Source:ZFIN;Acc:ZDB-GENE-041010-170]
89. nup98 ENSDARG00000074955 3998 0.995 - - - - - - 0.995 - - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
90. ccdc22 ENSDARG00000052379 2276 0.995 - - - - - - 0.995 - - coiled-coil domain containing 22 [Source:ZFIN;Acc:ZDB-GENE-050913-93]
91. hiat1a ENSDARG00000013117 607 0.995 - - - - - - 0.995 - - hippocampus abundant transcript 1a [Source:ZFIN;Acc:ZDB-GENE-030131-834]
92. RAB38 122 0.995 - - - - - - 0.995 - - RAB38, member RAS oncogene family
93. fam102ba ENSDARG00000053104 845 0.995 - - - - - - 0.995 - - family with sequence similarity 102, member B, a [Source:ZFIN;Acc:ZDB-GENE-060616-312]
94. mpeg1 mpeg1 123 0.995 - - - - - - 0.995 - -
95. ipmkb ENSDARG00000029291 625 0.995 - - - - - - 0.995 - - inositol polyphosphate multikinase b [Source:ZFIN;Acc:ZDB-GENE-061215-5]
96. cryba1b ENSDARG00000053875 3256 0.995 - - - - - - 0.995 - - crystallin, beta A1b [Source:ZFIN;Acc:ZDB-GENE-040718-326]
97. CABZ01078431.1 CABZ01078431.1 183 0.995 - - - - - - 0.995 - -
98. magixa ENSDARG00000025108 561 0.995 - - - - - - 0.995 - - MAGI family member, X-linked a [Source:ZFIN;Acc:ZDB-GENE-060503-115]
99. mapk15 ENSDARG00000100822 157 0.995 - - - - - - 0.995 - - mitogen-activated protein kinase 15 [Source:ZFIN;Acc:ZDB-GENE-050522-307]
100. tmem198b ENSDARG00000034685, ENSDARG00000111728 639 0.995 - - - - - - 0.995 - - transmembrane protein 198b [Source:ZFIN;Acc:ZDB-GENE-050809-123]

There are 964 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA