Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch73-173m3.3

Gene Name Gene ID Reads Annotation
si:ch73-173m3.3 si:ch73-173m3.3 425










Genes with expression patterns similar to si:ch73-173m3.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-173m3.3 si:ch73-173m3.3 425 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. nup88 ENSDARG00000003235, ENSDARG00000111135 1114 2.54 - - 0.878 - - 0.907 - 0.755 - nucleoporin 88 [Source:ZFIN;Acc:ZDB-GENE-050522-297]
3. SCARF2 1117 1.853 - - 0.943 - - 0.910 - - - scavenger receptor class F, member 2
4. arhgap29b ENSDARG00000017748 812 1.844 - - 0.960 - - 0.884 - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
5. msgn1 ENSDARG00000070546 188 1.84 - 0.872 0.968 - - - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
6. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 1.837 - - - - - 0.950 - 0.887 - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
7. C3H16orf58 C3H16orf58 487 1.832 - - 0.949 - - 0.883 - - -
8. rdh8b ENSDARG00000105060 183 1.807 - - - - - 0.885 - 0.922 - retinol dehydrogenase 8b [Source:ZFIN;Acc:ZDB-GENE-040426-1759]
9. CIR1 ENSDARG00000099733 66 1.784 - 0.872 - - - 0.912 - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
10. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 1.779 - 0.872 - - - - - 0.907 - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
11. BX649282.1 ENSDARG00000105704 347 1.778 - - - - - 0.925 - 0.853 -
12. ERO1LB ERO1LB 1433 1.773 - - 0.885 - - - - 0.888 -
13. C18H11orf58 C18H11orf58 1293 1.761 - - 0.958 - - - - 0.803 -
14. b3galtla b3galtla 111 1.759 - 0.872 - - - - - 0.887 -
15. aatkb ENSDARG00000104442 392 1.758 - 0.872 - - - - - 0.886 - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
16. exoc3l1 ENSDARG00000051899, ENSDARG00000113508, ENSDARG00000114148 195 1.73 - - - - - 0.923 0.807 - - exocyst complex component 3-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-36]
17. FBLN1 ENSDARG00000103311 877 1.727 - - 0.963 - 0.764 - - - - fibulin 1 [Source:NCBI gene;Acc:30240]
18. vcam1 vcam1 243 1.726 - 0.872 - - - - - 0.854 -
19. uba3 ENSDARG00000057987, ENSDARG00000116639 1181 1.72 - - 0.894 - - 0.826 - - - ubiquitin-like modifier activating enzyme 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2825]
20. GDPD4_1 GDPD4_1 190 1.714 0.806 - - - - - - 0.908 -
21. klf15 ENSDARG00000091127 1037 1.714 - - 0.921 - - - - 0.793 - Kruppel-like factor 15 [Source:ZFIN;Acc:ZDB-GENE-030131-7844]
22. si:ch211-173m16.2 ENSDARG00000093284 186 1.707 0.826 - - - 0.881 - - - - si:ch211-173m16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-155]
23. TRIP10 TRIP10 1079 1.702 - - 0.924 - - 0.778 - - -
24. mink1 ENSDARG00000035360, ENSDARG00000112785 13 1.696 0.751 - - - 0.945 - - - - misshapen-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-45]
25. CABZ01003826.1_1 CABZ01003826.1_1 1154 1.692 - - 0.931 - - 0.761 - - -
26. git2a ENSDARG00000061915 884 1.692 - - - 0.846 - - - 0.846 - G protein-coupled receptor kinase interacting ArfGAP 2a [Source:ZFIN;Acc:ZDB-GENE-060526-267]
27. arhgef9a ENSDARG00000061746 58 1.685 0.813 0.872 - - - - - - - Cdc42 guanine nucleotide exchange factor (GEF) 9a [Source:ZFIN;Acc:ZDB-GENE-070705-271]
28. tacc3 ENSDARG00000005454 2305 1.676 - - 0.779 - - 0.897 - - - transforming, acidic coiled-coil containing protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-327]
29. zgc:152698 32 1.675 - 0.872 - 0.803 - - - - - zgc:152698
30. fat3a ENSDARG00000033840 902 1.674 - 0.751 0.923 - - - - - - FAT atypical cadherin 3a [Source:ZFIN;Acc:ZDB-GENE-060929-1254]
31. optc ENSDARG00000014358 1295 1.669 - - 0.708 - - 0.961 - - - opticin [Source:ZFIN;Acc:ZDB-GENE-030131-1798]
32. sh3d19_1 ENSDARG00000088202, ENSDARG00000114126, ENSDARG00000117115 90 1.668 - - - - - 0.911 - - 0.757 SH3 domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-050522-481]
33. PCSK6 ENSDARG00000104574 710 1.666 - - - - - 0.919 - 0.747 - proprotein convertase subtilisin/kexin type 6 [Source:ZFIN;Acc:ZDB-GENE-100908-1]
34. sc:d217 ENSDARG00000079645 32 1.664 0.753 0.911 - - - - - - - sc:d217 [Source:ZFIN;Acc:ZDB-GENE-080303-15]
35. CABZ01080599.2 CABZ01080599.2 192 1.659 - 0.808 - - - - - 0.851 -
36. cdkn2c ENSDARG00000057610 179 1.655 - - - - 0.747 0.908 - - - cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-081104-145]
37. rprd2a ENSDARG00000058089 743 1.65 - - - - - 0.897 - 0.753 - regulation of nuclear pre-mRNA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6641]
38. cnr1 ENSDARG00000009020 33 1.645 - - - - 0.734 - 0.911 - - cannabinoid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040312-3]
39. zgc:174688 zgc:174688 170 1.645 0.751 - - - - - - 0.894 -
40. ccdc173 ENSDARG00000077928 260 1.643 - 0.732 - - - 0.911 - - - coiled-coil domain containing 173 [Source:ZFIN;Acc:ZDB-GENE-081104-457]
41. rab35 rab35 1287 1.637 - - - - - 0.847 - 0.790 -
42. TFPT ENSDARG00000089572, ENSDARG00000111694 112 1.635 - 0.736 - - - - - 0.899 - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
43. sra1 ENSDARG00000053619 2799 1.632 - - 0.742 - - 0.890 - - - steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
44. si:ch211-271e10.2 ENSDARG00000092667 177 1.626 - 0.765 - - - 0.861 - - - si:ch211-271e10.2 [Source:ZFIN;Acc:ZDB-GENE-060526-146]
45. SNORD30 SNORD30 34 1.625 - 0.872 - - - - 0.753 - -
46. TESK1_1 TESK1_1 276 1.624 0.743 - - - - 0.881 - - -
47. si:dkeyp-82h4.1 ENSDARG00000096463 18 1.623 0.751 0.872 - - - - - - - si:dkeyp-82h4.1 [Source:ZFIN;Acc:ZDB-GENE-120709-49]
48. bmp1b ENSDARG00000028053 25 1.623 0.751 0.872 - - - - - - - bone morphogenetic protein 1b [Source:ZFIN;Acc:ZDB-GENE-060818-2]
49. traf1 ENSDARG00000069482 50 1.623 0.751 0.872 - - - - - - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
50. si:ch211-188i4.4 5 1.623 0.751 0.872 - - - - - - - si:ch211-188i4.4, transcript variant X3
51. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 1.623 0.751 0.872 - - - - - - -
52. mcm5_1 ENSDARG00000019507 10 1.623 0.751 0.872 - - - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
53. si:ch211-120c15.1 si:ch211-120c15.1 20 1.623 0.751 0.872 - - - - - - -
54. hsp70l_1 ENSDARG00000055723 72 1.622 0.750 0.872 - - - - - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
55. chrna6 ENSDARG00000055559 60 1.622 0.750 0.872 - - - - - - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
56. hccs hccs 1758 1.616 - - 0.842 - - - - 0.774 -
57. alg12 ENSDARG00000041199, ENSDARG00000111299 365 1.613 - - - 0.727 - - - 0.886 - ALG12, alpha-1,6-mannosyltransferase [Source:ZFIN;Acc:ZDB-GENE-041210-295]
58. tmed3 ENSDARG00000028816, ENSDARG00000113132 1686 1.612 - - 0.762 - - 0.850 - - - transmembrane p24 trafficking protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8335]
59. slc22a7a ENSDARG00000056028 2426 1.607 - 0.867 - - - 0.740 - - - solute carrier family 22 (organic anion transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-050506-52]
60. mdm4 ENSDARG00000057513 1954 1.604 - - 0.864 - - 0.740 - - - MDM4, p53 regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6872]
61. trim55b ENSDARG00000058158 586 1.601 - 0.700 - - - 0.901 - - - tripartite motif containing 55b [Source:ZFIN;Acc:ZDB-GENE-060312-37]
62. serac1 ENSDARG00000056121, ENSDARG00000116580 196 1.6 - 0.729 - - - 0.871 - - - serine active site containing 1 [Source:ZFIN;Acc:ZDB-GENE-040616-1]
63. slc25a42 ENSDARG00000099368 2420 1.6 - - 0.847 - - 0.753 - - - solute carrier family 25, member 42 [Source:ZFIN;Acc:ZDB-GENE-060825-313]
64. si:dkey-14k9.3 ENSDARG00000045595 256 1.596 - - - - 0.731 - - 0.865 - si:dkey-14k9.3 [Source:ZFIN;Acc:ZDB-GENE-030131-2893]
65. nufip2 ENSDARG00000069066 3965 1.59 - - 0.868 - - 0.722 - - - nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
66. si:ch211-243a22.1 si:ch211-243a22.1 42 1.586 - 0.872 - - 0.714 - - - -
67. sh3rf1 ENSDARG00000070470 1463 1.576 - - - 0.727 - 0.849 - - - SH3 domain containing ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6288]
68. GLOD5 ENSDARG00000071871 715 1.574 - - - - - 0.779 - 0.795 - glyoxalase domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-050522-174]
69. kcnj13 ENSDARG00000043443 700 1.552 - - - - - 0.774 - 0.778 - potassium inwardly-rectifying channel, subfamily J, member 13 [Source:ZFIN;Acc:ZDB-GENE-070129-1]
70. mxd3 ENSDARG00000098350 3040 1.535 - - 0.722 - - 0.813 - - - MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
71. rereb ENSDARG00000075670 136 1.526 0.783 - - - - - 0.743 - - arginine-glutamic acid dipeptide (RE) repeats b [Source:ZFIN;Acc:ZDB-GENE-070212-3]
72. FUZ ENSDARG00000079730 821 1.509 0.754 - - - - 0.755 - - - fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
73. ralgps2 ENSDARG00000026519 1610 1.509 - - 0.796 - - - - 0.713 - Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
74. urp1 ENSDARG00000093493, ENSDARG00000109394, ENSDARG00000114654 637 1.501 0.728 0.773 - - - - - - - urotensin-related peptide 1 [Source:ZFIN;Acc:ZDB-GENE-100922-138]
75. mrpl3 ENSDARG00000103318 2308 1.483 - - 0.758 - - 0.725 - - - mitochondrial ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-8227]
76. ccdc146 ENSDARG00000004794 108 1.468 - - - - 0.711 - 0.757 - - coiled-coil domain containing 146 [Source:ZFIN;Acc:ZDB-GENE-041210-217]
77. itpkca ENSDARG00000002994 710 1.461 - - - - - 0.719 - 0.742 - inositol-trisphosphate 3-kinase Ca [Source:ZFIN;Acc:ZDB-GENE-030131-6009]
78. scinlb ENSDARG00000058348 1466 1.455 - - - - - 0.746 - 0.709 - scinderin like b [Source:ZFIN;Acc:ZDB-GENE-040426-2068]
79. ptbp1b ENSDARG00000031907, ENSDARG00000115714 3808 1.44 - - 0.740 - - 0.700 - - - polypyrimidine tract binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9796]
80. clptm1 ENSDARG00000018973, ENSDARG00000109534, ENSDARG00000114443 2439 1.425 - - 0.721 - - 0.704 - - - cleft lip and palate associated transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040801-265]
81. Metazoa_SRP_8 Metazoa_SRP_8 153 0.976 - - 0.976 - - - - - -
82. ndst2b ENSDARG00000060678 453 0.971 - - 0.971 - - - - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b [Source:ZFIN;Acc:ZDB-GENE-100430-2]
83. inpp4b ENSDARG00000075201 267 0.97 - - 0.970 - - - - - - inositol polyphosphate-4-phosphatase type II B [Source:ZFIN;Acc:ZDB-GENE-090312-97]
84. slc35c1 ENSDARG00000104669 65 0.969 - - 0.969 - - - - - - solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
85. CABZ01113061.1 CABZ01113061.1 51 0.968 - - 0.968 - - - - - -
86. CR942805.1 CR942805.1 94 0.968 - - 0.968 - - - - - -
87. zgc:158260 ENSDARG00000101703 103 0.968 - - 0.968 - - - - - - zgc:158260 [Source:ZFIN;Acc:ZDB-GENE-061201-24]
88. CMTM8 CMTM8 71 0.968 - - 0.968 - - - - - -
89. RNase_MRP RNase_MRP 118 0.968 - - 0.968 - - - - - -
90. foxd5 ENSDARG00000042485, ENSDARG00000109712 216 0.968 - - 0.968 - - - - - - forkhead box D5 [Source:ZFIN;Acc:ZDB-GENE-980605-4]
91. mphosph10 ENSDARG00000012495 1679 0.967 - - 0.967 - - - - - - M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-2146]
92. CABZ01073174.1 CABZ01073174.1 581 0.965 - - 0.965 - - - - - -
93. map3k10 ENSDARG00000055672 284 0.965 - - 0.965 - - - - - - mitogen-activated protein kinase kinase kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050419-112]
94. il2rb ENSDARG00000075720 116 0.965 - - 0.965 - - - - - - interleukin 2 receptor, beta [Source:ZFIN;Acc:ZDB-GENE-080108-2]
95. wdr66 ENSDARG00000059855 276 0.965 - - 0.965 - - - - - - WD repeat domain 66 [Source:ZFIN;Acc:ZDB-GENE-060526-328]
96. brf1a ENSDARG00000017835 206 0.965 - - 0.965 - - - - - - BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]
97. PLA2G3_1 PLA2G3_1 411 0.965 - - 0.965 - - - - - -
98. BX649554.3_1 BX649554.3_1 1071 0.964 - - 0.964 - - - - - -
99. TRAK1 212 0.964 - - 0.964 - - - - - - trafficking protein, kinesin binding 1, transcript variant X6
100. CU571255.1 CU571255.1 902 0.964 - - 0.964 - - - - - -

There are 1953 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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