Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-89o5.3

Gene Name Gene ID Reads Annotation
si:ch211-89o5.3 si:ch211-89o5.3 5










Genes with expression patterns similar to si:ch211-89o5.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-89o5.3 si:ch211-89o5.3 5 4 - 1.000 1.000 1.000 - - - - 1.000
2. ptger2a ENSDARG00000011434 6 2 - - - 1.000 - - - - 1.000 prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321]
3. GGT5 GGT5 1 2 - - - 1.000 - - - - 1.000
4. SSTR2 SSTR2 12 1.984 - 0.984 - - - - - - 1.000
5. ubb ENSDARG00000093313, ENSDARG00000112953 4 1.923 - 0.923 - - - - - - 1.000 ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]
6. zgc:114046 ENSDARG00000091728 68 1.883 - 1.000 0.883 - - - - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
7. si:ch211-234c11.3_1 ENSDARG00000093615 10 1.807 - - - 0.807 - - - - 1.000 si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
8. ACAP2 ENSDARG00000060783 9 1.797 - - 0.797 1.000 - - - - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-050208-640]
9. npvf ENSDARG00000036227 23 1.712 - - - 0.827 - - - - 0.885 neuropeptide VF precursor [Source:ZFIN;Acc:ZDB-GENE-070424-226]
10. nkx2.1b nkx2.1b 125 1.444 - - - 0.724 - - - - 0.720
11. cdc14aa ENSDARG00000013858 18 1 - - - - - - - - 1.000 cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
12. BX927130.1 ENSDARG00000099328 7 1 - - - - - - - - 1.000 si:dkey-27n6.5 [Source:NCBI gene;Acc:557869]
13. si:ch211-113a14.26 5 1 - - - 1.000 - - - - - si:ch211-113a14.26
14. si:ch1073-109g21.1 si:ch1073-109g21.1 0 1 - - - - - - - - 1.000
15. si:dkey-24h22.5 ENSDARG00000094556 4 1 - - - 1.000 - - - - - si:dkey-24h22.5 [Source:ZFIN;Acc:ZDB-GENE-090313-274]
16. htr5al htr5al 6 1 - - - - - - - - 1.000
17. KIAA0319 KIAA0319 2 1 - - - - - - - - 1.000
18. FP102016.2 FP102016.2 0 1 - - - - - - - - 1.000
19. MEI1 MEI1 2 1 - - - - - - - - 1.000
20. SLCO2B1 ENSDARG00000054609 0 1 - - - - - - - - 1.000 solute carrier organic anion transporter family, member 2B1 [Source:ZFIN;Acc:ZDB-GENE-051023-6]
21. zgc:92161 ENSDARG00000101749 27 1 - - - - - - - - 1.000 zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
22. BX119910.4 BX119910.4 0 1 - - - - - - - - 1.000
23. si:rp71-7l19.6 si:rp71-7l19.6 12 1 - - - - - - - - 1.000
24. CABZ01074669.1 CABZ01074669.1 12 1 - - - - - - - - 1.000
25. TFR2 ENSDARG00000103727 1 1 - - - 1.000 - - - - - transferrin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-041220-3]
26. CT737184.1 ENSDARG00000102726 0 1 - - - - - - - - 1.000
27. cyp2n13 ENSDARG00000042953 10 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
28. CABZ01030692.1 CABZ01030692.1 0 1 - - - - - - - - 1.000
29. si:dkeyp-46h3.8 ENSDARG00000093704 9 1 - - - 1.000 - - - - - si:dkeyp-46h3.8 [Source:ZFIN;Acc:ZDB-GENE-060503-183]
30. scn1a 8 1 - - - - - - - - 1.000 sodium channel, voltage-gated, type I, alpha, transcript variant X1
31. CU302316.1 ENSDARG00000109600 2 1 - - - - - - - - 1.000
32. si:dkey-179k24.6 si:dkey-179k24.6 5 1 - - - - - - - - 1.000
33. si:dkey-149m13.2 si:dkey-149m13.2 1 1 - - - - - - - - 1.000
34. slc15a1b ENSDARG00000044528 6 1 - - - - - - - - 1.000 solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
35. CR318624.1 ENSDARG00000094618 5 1 - - - - - - - - 1.000
36. si:dkey-14d8.1 ENSDARG00000095332 11 1 - - - - - - - - 1.000 si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
37. cep78 ENSDARG00000039229 1 1 - - - 1.000 - - - - - centrosomal protein 78 [Source:ZFIN;Acc:ZDB-GENE-070905-1]
38. si:ch211-254p10.2 ENSDARG00000056750 3 1 - - - - - - - - 1.000 si:ch211-254p10.2 [Source:ZFIN;Acc:ZDB-GENE-100922-17]
39. trpc6a ENSDARG00000056625, ENSDARG00000111066 4 1 - - - 1.000 - - - - - transient receptor potential cation channel, subfamily C, member 6a [Source:ZFIN;Acc:ZDB-GENE-040724-114]
40. si:ch211-198e13.3 5 1 - - - - - - - - 1.000 si:ch211-198e13.3, transcript variant X1
41. LIX1 ENSDARG00000052154 9 1 - - - - - - - - 1.000 limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
42. FP236851.1 FP236851.1 10 1 - - - 1.000 - - - - -
43. si:ch211-214p13.7 1 1 - - - - - - - - 1.000 si:ch211-214p13.7
44. si:dkey-150h13.1 si:dkey-150h13.1 1 1 - - - - - - - - 1.000
45. iqsec2 iqsec2 304 1 - 1.000 - - - - - - -
46. C17H8orf74 C17H8orf74 4 1 - - - - - - - - 1.000
47. CT030048.2 CT030048.2 3 1 - - - - - - - - 1.000
48. vcam1a ENSDARG00000078201 1 1 - - - - - - - - 1.000 vascular cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-060503-172]
49. zgc:162724 zgc:162724 9 1 - - - - - - - - 1.000
50. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 1 - - - - - - - - 1.000 solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
51. FP103003.1_1 FP103003.1_1 6 1 - - - - - - - - 1.000
52. CDR2_1 CDR2_1 8 1 - - - - - - - - 1.000
53. ttc6 ENSDARG00000104125 7 1 - - - - - - - - 1.000 tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
54. si:dkey-188i13.8 ENSDARG00000092725 1 1 - - - - - - - - 1.000 si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
55. si:dkey-274m14.3 si:dkey-274m14.3 7 1 - - - - - - - - 1.000
56. si:ch211-196g2.6 si:ch211-196g2.6 1 1 - - - 1.000 - - - - -
57. mybpc2a ENSDARG00000030157 11 1 - - - - - - - - 1.000 myosin binding protein C, fast type a [Source:ZFIN;Acc:ZDB-GENE-060901-1]
58. PDE6H 3 1 - - - - - - - - 1.000 phosphodiesterase 6H, cGMP-specific, cone, gamma, transcript variant 2
59. NPM2 NPM2 41 1 - - - - - - - - 1.000
60. slc47a2 2 1 - - - - - - - - 1.000 solute carrier family 47 (multidrug and toxin extrusion), member 2
61. si:ch73-341k19.1 ENSDARG00000095946 5 1 - - - - - - - - 1.000 si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
62. clec3ba ENSDARG00000076541 3 1 - - - - - - - - 1.000 C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
63. si:ch211-28e16.5 ENSDARG00000093376 2 1 - - - 1.000 - - - - - si:ch211-28e16.5 [Source:ZFIN;Acc:ZDB-GENE-090313-111]
64. zgc:66313 ENSDARG00000030357 45 1 - - - 1.000 - - - - - zgc:66313 [Source:ZFIN;Acc:ZDB-GENE-040426-1606]
65. si:dkey-4j21.1 17 1 - - - - - - - - 1.000 si:dkey-4j21.1, transcript variant X2
66. agtr1a ENSDARG00000018616 1 1 - - - - - - - - 1.000 angiotensin II receptor, type 1a [Source:ZFIN;Acc:ZDB-GENE-070912-546]
67. CDK18 ENSDARG00000012204 5 1 - - - - - - - - 1.000 cyclin dependent kinase 18 [Source:HGNC Symbol;Acc:HGNC:8751]
68. FJX1 ENSDARG00000035873 22 1 - - - - - - - - 1.000 four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
69. si:dkey-266f7.10 ENSDARG00000086613 7 1 - - - 1.000 - - - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
70. si:dkeyp-35e5.10 ENSDARG00000107425 8 1 - - - 1.000 - - - - - si:dkeyp-35e5.10 [Source:ZFIN;Acc:ZDB-GENE-110913-63]
71. skila ENSDARG00000023933 2 1 - - - - - - - - 1.000 SKI-like proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-070912-548]
72. 5S_rRNA_6 5S_rRNA_6 11 1 - - - 1.000 - - - - -
73. si:dkey-13k17.1 si:dkey-13k17.1 2 1 - - - 1.000 - - - - -
74. CU467982.1 CU467982.1 12 1 - - - - - - - - 1.000
75. tcp10 tcp10 1 1 - - - 1.000 - - - - -
76. zgc:113886 ENSDARG00000077712, ENSDARG00000100587, ENSDARG00000108812 19 1 - - - 1.000 - - - - - zgc:113886 [Source:ZFIN;Acc:ZDB-GENE-050913-91]
77. ldlrap1b ENSDARG00000039750 2 1 - - - - - - - - 1.000 low density lipoprotein receptor adaptor protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-1012]
78. dock4b ENSDARG00000024874 32 1 - - - 1.000 - - - - - dedicator of cytokinesis 4b [Source:ZFIN;Acc:ZDB-GENE-060130-74]
79. LOX LOX 7 1 - - - 1.000 - - - - -
80. si:dkey-25o1.9 si:dkey-25o1.9 0 1 - - - 1.000 - - - - -
81. mfsd9 ENSDARG00000074728 6 1 - - - 1.000 - - - - - major facilitator superfamily domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-070912-190]
82. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - - - - - 1.000
83. CABZ01056274.1 CABZ01056274.1 3 1 - - - - - - - - 1.000
84. slc35c1 ENSDARG00000104669 65 1 - - - - - - - - 1.000 solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
85. GABRA2 ENSDARG00000113737 5 1 - - - - - - - - 1.000 gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
86. si:ch211-13k12.1 si:ch211-13k12.1 25 1 - - - - - - - - 1.000
87. 5S_rRNA_13 5S_rRNA_13 0 1 - - - - - - - - 1.000
88. rhbdd3 ENSDARG00000079816 2 1 - - - - - - - - 1.000 rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
89. si:ch211-215m21.29 si:ch211-215m21.29 5 1 - - - - - - - - 1.000
90. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1 - - - - - - - - 1.000 potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
91. wdr21 ENSDARG00000003197, ENSDARG00000110654 4 1 - - - 1.000 - - - - - WD repeat domain 21 [Source:ZFIN;Acc:ZDB-GENE-040109-2]
92. rspo4 ENSDARG00000038593 3 1 - - - 1.000 - - - - - R-spondin 4 [Source:ZFIN;Acc:ZDB-GENE-110103-2]
93. CNBD1 ENSDARG00000091489 0 1 - - - - - - - - 1.000 cyclic nucleotide binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130530-1022]
94. CU459094.2 ENSDARG00000113503 5 1 - - - 1.000 - - - - - uncharacterized LOC100331538 [Source:NCBI gene;Acc:100331538]
95. si:dkey-11f4.14 ENSDARG00000098461 35 1 - - - 1.000 - - - - - si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
96. GPT GPT 2 1 - - - - - - - - 1.000
97. slc5a5 ENSDARG00000005392 6 1 - - - - - - - - 1.000 solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
98. CR356223.1 ENSDARG00000093865 1 1 - - - - - - - - 1.000
99. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1 - - - - - - - - 1.000 chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
100. si:ch211-149k23.10 si:ch211-149k23.10 10 1 - - - 1.000 - - - - -

There are 624 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA