Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-62a1.3

Gene Name Gene ID Reads Annotation
si:ch211-62a1.3 ENSDARG00000112419 8 si:ch211-62a1.3 [Source:ZFIN;Acc:ZDB-GENE-061207-41]










Genes with expression patterns similar to si:ch211-62a1.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-62a1.3 ENSDARG00000112419 8 4 - - - 1.000 1.000 - - 1.000 1.000 si:ch211-62a1.3 [Source:ZFIN;Acc:ZDB-GENE-061207-41]
2. rnf150a_1 ENSDARG00000024827 12 1.849 - - - 0.881 - - - - 0.968 ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
3. zgc:172282 ENSDARG00000105059 64 1.841 - - - - 0.979 - - - 0.862 zgc:172282 [Source:ZFIN;Acc:ZDB-GENE-080219-38]
4. galca ENSDARG00000037064 12 1.58 - - - - 0.824 - - - 0.756 galactosylceramidase a [Source:ZFIN;Acc:ZDB-GENE-040724-243]
5. bmf2 ENSDARG00000041414, ENSDARG00000116024 18 1 - - - - 1.000 - - - - BCL2 modifying factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-319]
6. CABZ01078124.1 CABZ01078124.1 4 1 - - - 1.000 - - - - -
7. KAZN_1 KAZN_1 13 1 - - - - 1.000 - - - -
8. si:dkey-15h19.3 si:dkey-15h19.3 5 1 - - - - 1.000 - - - -
9. U1_37 U1_37 2 1 - - - - 1.000 - - - -
10. XAF1 ENSDARG00000068939 12 1 - - - - 1.000 - - - - XIAP associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-060929-840]
11. ERC1 ENSDARG00000076014 10 1 - - - - 1.000 - - - - ELKS/RAB6-interacting/CAST family member 1 [Source:HGNC Symbol;Acc:HGNC:17072]
12. si:dkey-30k22.10 2 1 - - - - 1.000 - - - - si:dkey-30k22.10
13. si:dkey-18a10.3 ENSDARG00000090814 2 1 - - - - 1.000 - - - - si:dkey-18a10.3 [Source:ZFIN;Acc:ZDB-GENE-091204-174]
14. sult1st6 ENSDARG00000006811 31 1 - - - - 1.000 - - - - sulfotransferase family 1, cytosolic sulfotransferase 6 [Source:ZFIN;Acc:ZDB-GENE-040718-343]
15. palmda ENSDARG00000001913 26 1 - - - - 1.000 - - - - palmdelphin a [Source:ZFIN;Acc:ZDB-GENE-070705-48]
16. plekho1b ENSDARG00000077499 21 1 - - - - 1.000 - - - - pleckstrin homology domain containing, family O member 1b [Source:ZFIN;Acc:ZDB-GENE-100609-2]
17. si:dkey-264b2.3 19 1 - - - - 1.000 - - - - si:dkey-264b2.3, transcript variant X2
18. kcnk1b ENSDARG00000017254 2 1 - - - - 1.000 - - - - potassium channel, subfamily K, member 1b [Source:ZFIN;Acc:ZDB-GENE-090312-78]
19. dlg5b dlg5b 3 1 - - - - 1.000 - - - -
20. ighv2-3 ENSDARG00000096376 2 1 - - - - 1.000 - - - - immunoglobulin heavy variable 2-3 [Source:ZFIN;Acc:ZDB-GENE-040514-3]
21. itgb3b ENSDARG00000045070 4 1 - - - - 1.000 - - - - integrin beta 3b [Source:ZFIN;Acc:ZDB-GENE-071207-2]
22. si:dkey-176f19.1 ENSDARG00000101463 27 0.992 - - - - 0.992 - - - - si:dkey-176f19.1 [Source:ZFIN;Acc:ZDB-GENE-110914-124]
23. zgc:123282 zgc:123282 2 0.992 - - - - 0.992 - - - -
24. si:dkey-46g23.2 ENSDARG00000115817 11 0.992 - - - - 0.992 - - - - si:dkey-46g23.2 [Source:ZFIN;Acc:ZDB-GENE-070705-476]
25. GAS2 18 0.992 - - - - 0.992 - - - - growth arrest specific 2, transcript variant X1
26. si:ch211-132g1.6 ENSDARG00000093102 13 0.988 - - - - 0.988 - - - - si:ch211-132g1.6 [Source:ZFIN;Acc:ZDB-GENE-091204-469]
27. SNORD30 SNORD30 34 0.986 - - - - 0.986 - - - -
28. iqsec3a ENSDARG00000099850, ENSDARG00000116182 12 0.981 - - - - 0.981 - - - - IQ motif and Sec7 domain 3a [Source:ZFIN;Acc:ZDB-GENE-041210-343]
29. 5S_rRNA_17 5S_rRNA_17 4 0.981 - - - - 0.981 - - - -
30. si:dkey-9p20.24 si:dkey-9p20.24 4 0.977 - - - - 0.977 - - - -
31. si:ch211-213i16.4 8 0.972 - - - - 0.972 - - - - si:ch211-213i16.4, transcript variant X1
32. TMEM150B TMEM150B 1 0.97 - - - - - - - 0.970 -
33. crygs4 ENSDARG00000010701, ENSDARG00000116551 7 0.97 - - - - - - - 0.970 - crystallin, gamma S4 [Source:ZFIN;Acc:ZDB-GENE-050223-2]
34. lrguk ENSDARG00000069698 5 0.97 - - - - - - - 0.970 - leucine-rich repeats and guanylate kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-232]
35. CU468012.1 ENSDARG00000077794 3 0.97 - - - - - - - 0.970 -
36. plekhs1 ENSDARG00000079227 4 0.97 - - - - - - - 0.970 - pleckstrin homology domain containing, family S member 1 [Source:ZFIN;Acc:ZDB-GENE-080204-50]
37. SLC22A7 SLC22A7 3 0.97 - - - - - - - 0.970 -
38. CABZ01118678.1 ENSDARG00000091359 2 0.97 - - - - - - - 0.970 - calmodulin-regulated spectrin-associated protein 3-like [Source:NCBI gene;Acc:100007608]
39. si:dkey-7m11.1 si:dkey-7m11.1 1 0.97 - - - - - - - 0.970 -
40. SPTBN4 ENSDARG00000092624 6 0.97 - - - - - - - 0.970 - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
41. PKDCC PKDCC 14 0.97 - - - - - - - 0.970 -
42. si:dkey-71l1.1 ENSDARG00000052411 11 0.97 - - - - - - - 0.970 - si:dkey-71l1.1 [Source:ZFIN;Acc:ZDB-GENE-070705-489]
43. PDE1C_1 PDE1C_1 2 0.97 - - - - - - - 0.970 -
44. U8 U8 11 0.97 - - - - - - - 0.970 -
45. si:ch211-233f10.6 si:ch211-233f10.6 2 0.97 - - - - - - - 0.970 -
46. lepa ENSDARG00000091085 11 0.97 - - - - - - - 0.970 - leptin a [Source:ZFIN;Acc:ZDB-GENE-081001-1]
47. gda ENSDARG00000002986 9 0.97 - - - - - - - 0.970 - guanine deaminase [Source:ZFIN;Acc:ZDB-GENE-050522-434]
48. fbln1 ENSDARG00000103311 2 0.97 - - - - - - - 0.970 - fibulin 1 [Source:NCBI gene;Acc:30240]
49. sdr42e1 ENSDARG00000098838 25 0.969 - - - - 0.969 - - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]
50. dennd3b ENSDARG00000013153 6 0.967 - - - - 0.967 - - - - DENN/MADD domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-091230-7]
51. si:ch73-287n15.1 si:ch73-287n15.1 20 0.962 - - - - - - - 0.962 -
52. rhoab ENSDARG00000094673 26 0.96 - - - - 0.960 - - - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
53. piwil1 ENSDARG00000041699 21 0.959 - - - - - - - 0.959 - piwi-like RNA-mediated gene silencing 1 [Source:ZFIN;Acc:ZDB-GENE-030813-2]
54. C7H15orf43 C7H15orf43 10 0.954 - - - - - - - 0.954 -
55. CU928217.1 CU928217.1 12 0.948 - - - - 0.948 - - - -
56. rrad ENSDARG00000052011, ENSDARG00000112434 70 0.948 - - - - 0.948 - - - - Ras-related associated with diabetes [Source:ZFIN;Acc:ZDB-GENE-030131-5607]
57. si:dkey-85n7.8 ENSDARG00000095793 31 0.943 - - - - 0.943 - - - - si:dkey-85n7.8 [Source:ZFIN;Acc:ZDB-GENE-110411-127]
58. pcbp3 ENSDARG00000054378 74 0.943 - - - - 0.943 - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
59. USP43 USP43 14 0.942 - - - - 0.942 - - - -
60. si:dkeyp-117h8.10 si:dkeyp-117h8.10 16 0.94 - - - - - - - - 0.940
61. HABP4 HABP4 33 0.937 - - - - 0.937 - - - -
62. ndufaf1 ENSDARG00000025549 42 0.931 - - - - 0.931 - - - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050306-9]
63. cldn17 ENSDARG00000099950 14 0.93 - - - - - - - - 0.930 claudin 17 [Source:ZFIN;Acc:ZDB-GENE-070821-2]
64. lgalslb ENSDARG00000055525 18 0.922 - - - - 0.922 - - - - lectin, galactoside-binding-like b [Source:ZFIN;Acc:ZDB-GENE-030616-570]
65. tnmd ENSDARG00000052615 42 0.921 - - - - 0.921 - - - - tenomodulin [Source:ZFIN;Acc:ZDB-GENE-080220-31]
66. PEG3_37 PEG3_37 4 0.919 - - - - - - - 0.919 -
67. CT030048.2 CT030048.2 3 0.913 - - - - - - - 0.913 -
68. SNORA31 SNORA31 23 0.913 - - - - - - - 0.913 -
69. TRIM35_1 TRIM35_1 11 0.91 - - - - - - - 0.910 -
70. zgc:66024 ENSDARG00000068840, ENSDARG00000068846 37 0.907 - - - - - - - 0.907 - zgc:66024 [Source:ZFIN;Acc:ZDB-GENE-040426-1511]
71. si:ch211-132b12.7 ENSDARG00000068374 30 0.904 - - - - - - - 0.904 - si:ch211-132b12.7 [Source:ZFIN;Acc:ZDB-GENE-050419-250]
72. CR385054.1_1 ENSDARG00000100106 43 0.9 - - - - 0.900 - - - -
73. GJD4 ENSDARG00000116895 139 0.9 - - - - - - - 0.900 - gap junction protein delta 4 [Source:HGNC Symbol;Acc:HGNC:23296]
74. PIK3CA ENSDARG00000075456 39 0.893 - - - - 0.893 - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha [Source:ZFIN;Acc:ZDB-GENE-130409-1]
75. tmem179b ENSDARG00000069495 17 0.892 - - - - - - - - 0.892 transmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]
76. si:ch211-113a14.19_2 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 17 0.89 - - - - 0.890 - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
77. COL26A1 COL26A1 9 0.883 - - - - - - - - 0.883
78. th ENSDARG00000030621, ENSDARG00000109947 6 0.874 - - - - - - - - 0.874 tyrosine hydroxylase [Source:ZFIN;Acc:ZDB-GENE-990621-5]
79. si:dkey-78a14.5 14 0.87 - - - - - - - 0.870 - si:dkey-78a14.5, transcript variant X2
80. bcl3 ENSDARG00000087832 69 0.87 - - - - 0.870 - - - - B cell CLL/lymphoma 3 [Source:ZFIN;Acc:ZDB-GENE-061013-1]
81. cbln13 ENSDARG00000026904, ENSDARG00000114505 93 0.87 - - - - 0.870 - - - - cerebellin 13 [Source:ZFIN;Acc:ZDB-GENE-070912-288]
82. hpx ENSDARG00000012609 93 0.868 - - - - - - - - 0.868 hemopexin [Source:ZFIN;Acc:ZDB-GENE-030131-5773]
83. tdrd7 tdrd7 31 0.867 - - - - - - - 0.867 -
84. U6_2 U6_2 1 0.865 - - - - - - - - 0.865
85. VSIG10L ENSDARG00000089237 12 0.865 - - - - - - - - 0.865 V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
86. si:dkey-61p9.7 ENSDARG00000068865 3 0.865 - - - - - - - - 0.865 si:dkey-61p9.7 [Source:ZFIN;Acc:ZDB-GENE-041210-241]
87. AKNA_1 AKNA_1 2 0.865 - - - - - - - - 0.865
88. hbaa2 ENSDARG00000069735 10 0.865 - - - - - - - - 0.865 hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
89. olfch1 ENSDARG00000100026 3 0.865 - - - - - - - - 0.865 olfactory receptor C family, h1 [Source:ZFIN;Acc:ZDB-GENE-060503-819]
90. si:dkeyp-74a11.3 si:dkeyp-74a11.3 5 0.865 - - - - - - - - 0.865
91. bfb ENSDARG00000005616, ENSDARG00000110364 30 0.865 - - - - - - - - 0.865 complement component bfb [Source:ZFIN;Acc:ZDB-GENE-990415-34]
92. C20orf26 C20orf26 1 0.865 - - - - - - - - 0.865
93. zgc:153921_1 ENSDARG00000020738, ENSDARG00000038405 19 0.865 - - - - - - - - 0.865 zgc:153921 [Source:ZFIN;Acc:ZDB-GENE-060929-816]
94. CHST7 ENSDARG00000044341 3 0.865 - - - - - - - - 0.865 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 [Source:ZFIN;Acc:ZDB-GENE-131121-150]
95. or111-8 ENSDARG00000086383 1 0.865 - - - - - - - - 0.865 odorant receptor, family D, subfamily 111, member 8 [Source:ZFIN;Acc:ZDB-GENE-010308-12]
96. lsm14b ENSDARG00000025386 23 0.865 - - - - - - - - 0.865 LSM family member 14B [Source:ZFIN;Acc:ZDB-GENE-040426-779]
97. HTRA2_11 HTRA2_11 2 0.865 - - - - - - - - 0.865
98. dao.3 ENSDARG00000035601 15 0.865 - - - - - - - - 0.865 D-amino-acid oxidase, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1894]
99. appa ENSDARG00000104279 4 0.865 - - - - - - - - 0.865 amyloid beta (A4) precursor protein a [Source:ZFIN;Acc:ZDB-GENE-000616-13]
100. ctsa ENSDARG00000098114 2 0.865 - - - - - - - - 0.865 cathepsin A [Source:ZFIN;Acc:ZDB-GENE-030131-537]

There are 123 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA