Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-39a7.1

Gene Name Gene ID Reads Annotation
si:ch211-39a7.1 ENSDARG00000037427 31 si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]










Genes with expression patterns similar to si:ch211-39a7.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-39a7.1 ENSDARG00000037427 31 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
2. MAP3K2 ENSDARG00000062884 34 3.451 - 0.999 - 0.780 - 0.956 - 0.716 - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
3. amigo3 ENSDARG00000074469 39 2.435 - - - - 0.929 0.790 0.716 - - adhesion molecule with Ig-like domain 3 [Source:ZFIN;Acc:ZDB-GENE-050208-449]
4. cdk5r2b ENSDARG00000078671 20 1.943 - - - - - 1.000 0.943 - - cyclin-dependent kinase 5, regulatory subunit 2b (p39) [Source:ZFIN;Acc:ZDB-GENE-040801-251]
5. itm1 itm1 32 1.869 - - - - 0.869 1.000 - - -
6. notchl ENSDARG00000088308 28 1.847 - - - 0.868 0.979 - - - - notch homolog, like [Source:ZFIN;Acc:ZDB-GENE-070220-2]
7. TENM2 ENSDARG00000037122 48 1.844 - - - - - 1.000 0.844 - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
8. rbfox3l rbfox3l 34 1.844 - - - - - 1.000 0.844 - -
9. si:dkey-266f7.10 ENSDARG00000086613 7 1.844 - - - - - 1.000 0.844 - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
10. BX248582.3 BX248582.3 3 1.844 - - - - - 1.000 0.844 - -
11. rab11bb_1 ENSDARG00000090086 7 1.844 - - - - - 1.000 0.844 - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
12. si:dkey-154p10.3 ENSDARG00000068366 153 1.841 - 0.997 - - - - 0.844 - - si:dkey-154p10.3 [Source:ZFIN;Acc:ZDB-GENE-070912-380]
13. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.831 - - - - - 0.973 0.858 - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
14. PIAS1 PIAS1 13 1.82 - - - - 0.976 - 0.844 - -
15. akt3a_1 ENSDARG00000104810 12 1.808 - - - - - 1.000 - 0.808 - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
16. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1.808 - - - - - 1.000 - 0.808 - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
17. slitrk3b ENSDARG00000074739 19 1.8 - - - - - 0.956 0.844 - - SLIT and NTRK-like family, member 3b [Source:ZFIN;Acc:ZDB-GENE-070912-352]
18. si:ch73-167f18.4 si:ch73-167f18.4 9 1.799 - - - - - 1.000 0.799 - -
19. rtel1 ENSDARG00000035074 17 1.785 - - - - 0.919 0.866 - - - regulator of telomere elongation helicase 1 [Source:ZFIN;Acc:ZDB-GENE-050306-11]
20. zgc:172139 ENSDARG00000068830 10 1.772 - - - 0.806 0.966 - - - - zgc:172139 [Source:ZFIN;Acc:ZDB-GENE-080204-49]
21. si:dkey-238f9.1 ENSDARG00000079446 51 1.765 - - - - - 0.765 1.000 - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
22. slc5a9 ENSDARG00000005518 16 1.755 - - - - - 0.911 0.844 - - solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
23. gphnb ENSDARG00000100851 118 1.751 - - - - - 0.868 0.883 - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
24. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 1.737 - - - - - 0.751 0.986 - - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
25. spock3 ENSDARG00000070266, ENSDARG00000110158 934 1.728 - 0.925 - - - - 0.803 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
26. tecrl2 tecrl2 11 1.727 - - - - - 0.883 0.844 - -
27. ACAP2 ENSDARG00000060783 9 1.727 - - - - - 0.883 0.844 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-050208-640]
28. nefla ENSDARG00000057568 62 1.727 - - - - - 0.847 0.880 - - neurofilament, light polypeptide a [Source:ZFIN;Acc:ZDB-GENE-091117-1]
29. ASAP1 ASAP1 47 1.707 - - 0.707 - - 1.000 - - -
30. p2rx3b ENSDARG00000029718 105 1.701 - - - - - 0.866 0.835 - - purinergic receptor P2X, ligand-gated ion channel, 3b [Source:ZFIN;Acc:ZDB-GENE-030319-3]
31. opcml ENSDARG00000013005 18 1.693 - - - - - 0.849 0.844 - - opioid binding protein/cell adhesion molecule-like [Source:ZFIN;Acc:ZDB-GENE-040927-3]
32. cntnap5b ENSDARG00000075189 16 1.693 - - - - - 0.849 0.844 - - contactin associated protein-like 5b [Source:ZFIN;Acc:ZDB-GENE-070705-209]
33. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 1.693 - - - - - 0.849 0.844 - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
34. CABZ01063077.1 CABZ01063077.1 22 1.688 - - - - - 0.702 0.986 - -
35. DNAJC14 ENSDARG00000105398 20 1.669 - - - 0.825 - - 0.844 - - DnaJ (Hsp40) homolog, subfamily C, member 14 [Source:ZFIN;Acc:ZDB-GENE-121105-7]
36. phyhiplb ENSDARG00000070498 348 1.653 - 0.903 - - - - 0.750 - - phytanoyl-CoA 2-hydroxylase interacting protein-like b [Source:ZFIN;Acc:ZDB-GENE-040927-27]
37. brd2b ENSDARG00000046087 73 1.641 - - - - 0.797 - 0.844 - - bromodomain containing 2b [Source:ZFIN;Acc:ZDB-GENE-070220-1]
38. ntrk2a ENSDARG00000059897 185 1.631 - - - - - 0.751 0.880 - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
39. gpr173 ENSDARG00000042922 238 1.627 - - - - - 0.783 0.844 - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
40. grm1a ENSDARG00000026796 9 1.624 - - - 0.780 - - 0.844 - - glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893]
41. MPP3_1 MPP3_1 88 1.618 - - - - - 0.795 0.823 - -
42. pax6b ENSDARG00000045936 349 1.6 - - - - - 0.744 0.856 - - paired box 6b [Source:ZFIN;Acc:ZDB-GENE-001031-1]
43. cacng2a ENSDARG00000032565 99 1.591 - - - - - 0.855 0.736 - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
44. st8sia1_1 ENSDARG00000098221 16 1.585 - - - - - 0.849 0.736 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
45. GRM8_1 GRM8_1 85 1.584 - - - - - 0.726 0.858 - -
46. erbb4a ENSDARG00000063207 55 1.556 - - - - 0.712 - 0.844 - - erb-b2 receptor tyrosine kinase 4a [Source:ZFIN;Acc:ZDB-GENE-030918-4]
47. notch1a ENSDARG00000103554 498 1.556 - - - - - 0.798 0.758 - - notch 1a [Source:ZFIN;Acc:ZDB-GENE-990415-173]
48. C10H5orf63 C10H5orf63 17 1.546 - - - - - 0.702 0.844 - -
49. SV2B SV2B 208 1.525 - - - - 0.789 - 0.736 - -
50. RSF1_2 RSF1_2 1343 1.524 - - - - - 0.813 0.711 - -
51. HRASLS ENSDARG00000100021 16 1.522 - - - 0.806 - - 0.716 - - HRAS-like suppressor [Source:ZFIN;Acc:ZDB-GENE-040718-330]
52. SLC35F4 ENSDARG00000103124 55 1.506 - - - - - 0.782 0.724 - - solute carrier family 35, member F4 [Source:ZFIN;Acc:ZDB-GENE-131121-49]
53. shisa4 ENSDARG00000006307, ENSDARG00000112041 109 1.483 - - - - - 0.727 0.756 - - shisa family member 4 [Source:ZFIN;Acc:ZDB-GENE-050417-419]
54. nefmb ENSDARG00000043697 2052 1.477 - 0.756 - - - - 0.721 - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
55. C24H16orf11 C24H16orf11 32 1 - - - - - 1.000 - - -
56. BRSK2_2 BRSK2_2 3 1 - - - - - 1.000 - - -
57. CU929163.1 CU929163.1 11 1 - - - - - 1.000 - - -
58. CR753817.1 ENSDARG00000110927 26 1 - - - - - 1.000 - - -
59. si:dkey-97l20.5 si:dkey-97l20.5 33 1 - - - - - 1.000 - - -
60. si:ch211-199o1.2 ENSDARG00000056210 33 1 - - - - - 1.000 - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
61. CU463316.1 CU463316.1 1 1 - - - - - 1.000 - - -
62. si:dkey-284e7.2 si:dkey-284e7.2 14 1 - - - - - - 1.000 - -
63. prox2 ENSDARG00000041952, ENSDARG00000117137 112 1 - - - - - 1.000 - - - prospero homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-081003-3]
64. si:dkey-156m18.1 si:dkey-156m18.1 13 1 - - - - - 1.000 - - -
65. strip1 ENSDARG00000074084 0 1 - - - - - 1.000 - - - striatin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2927]
66. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - 1.000 - - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
67. si:dkey-207j16.9 si:dkey-207j16.9 0 1 - - - - - 1.000 - - -
68. vip ENSDARG00000078247 10 1 - - - - - 1.000 - - - vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
69. tecpr1a ENSDARG00000062515 7 1 - - - - - 1.000 - - - tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
70. si:ch211-202n12.2 ENSDARG00000096665 4 1 - - - - - 1.000 - - - si:ch211-202n12.2 [Source:ZFIN;Acc:ZDB-GENE-121214-12]
71. BX119910.15 BX119910.15 4 1 - - - - - 1.000 - - -
72. CABZ01021426.1 CABZ01021426.1 25 1 - - - - - 1.000 - - -
73. ttll3 ENSDARG00000053728 7 1 - - - - - 1.000 - - - tubulin tyrosine ligase-like family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-182]
74. si:ch211-285d14.3 si:ch211-285d14.3 1 1 - - - - - 1.000 - - -
75. CR384075.2 CR384075.2 1 1 - - - - - 1.000 - - -
76. fam19a5 fam19a5 8 1 - - - - - 1.000 - - -
77. si:ch211-232k18.2 si:ch211-232k18.2 2 1 - - - - - 1.000 - - -
78. mylkb ENSDARG00000004753 95 1 - - - - - 1.000 - - - myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
79. KHNYN ENSDARG00000092488 10 1 - - - - - 1.000 - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
80. PRDM12 PRDM12 133 1 - - - - - 1.000 - - -
81. ebi3 ENSDARG00000053620 5 1 - - - - - 1.000 - - - Epstein-Barr virus induced 3 [Source:ZFIN;Acc:ZDB-GENE-070912-615]
82. FAM163A_1 ENSDARG00000093021 6 1 - - - - - 1.000 - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
83. si:rp71-1c10.10 ENSDARG00000086255, ENSDARG00000109343 14 1 - - - - - 1.000 - - - si:rp71-1c10.10 [Source:ZFIN;Acc:ZDB-GENE-130603-55]
84. si:dkey-122c11.7 ENSDARG00000103721 3 1 - - - - - 1.000 - - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
85. si:dkey-20i20.13 si:dkey-20i20.13 0 1 - - - - - 1.000 - - -
86. ENSDARG00000091446 ENSDARG00000091446 239 1 - - - - - 1.000 - - -
87. fam5b fam5b 45 1 - - - - - 1.000 - - -
88. si:rp71-84d19.2 si:rp71-84d19.2 34 1 - - - - - 1.000 - - -
89. kctd12b ENSDARG00000037507, ENSDARG00000111869 21 1 - - - - - 1.000 - - - potassium channel tetramerisation domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-050417-104]
90. ZP2 ZP2 14 1 - 1.000 - - - - - - -
91. RIMS1 RIMS1 9 1 - - - - - 1.000 - - -
92. URB1_1 URB1_1 8 1 - - - - - 1.000 - - -
93. dapk2 dapk2 24 1 - - - - - 1.000 - - -
94. BX649417.1 ENSDARG00000117387 1 1 - - - - - 1.000 - - -
95. si:ch211-217k17.10 ENSDARG00000079345 4 1 - - - - - 1.000 - - - si:ch211-217k17.10 [Source:ZFIN;Acc:ZDB-GENE-030131-8827]
96. CU571066.3 CU571066.3 0 1 - - - - - 1.000 - - -
97. si:ch211-145g9.7 32 1 - - - - - 1.000 - - - si:ch211-145g9.7, transcript variant X1
98. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1 - - - - - 1.000 - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
99. nupl2 ENSDARG00000029043 105 1 - - - - - 1.000 - - - nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
100. rnf165a ENSDARG00000077906 133 1 - - - - - - 1.000 - - ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]

There are 1563 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA