Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-286b5.5

Gene Name Gene ID Reads Annotation
si:ch211-286b5.5 ENSDARG00000096661 3136 si:ch211-286b5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-209]










Genes with expression patterns similar to si:ch211-286b5.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-286b5.5 ENSDARG00000096661 3136 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-286b5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-209]
2. zgc:109868 zgc:109868 7474 2.473 - 0.924 - - - - 0.790 - 0.759
3. cab39l1 ENSDARG00000021374, ENSDARG00000112995 2033 2.299 0.753 - - - - - 0.716 - 0.830 calcium binding protein 39, like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2897]
4. rnf170 ENSDARG00000104069 838 2.281 0.759 - - - - - 0.764 - 0.758 ring finger protein 170 [Source:ZFIN;Acc:ZDB-GENE-040426-2572]
5. mir205 2147 1.992 - 0.998 - - - 0.994 - - - microRNA 205
6. ccnl1a ENSDARG00000055124, ENSDARG00000116311 2174 1.845 - 0.999 - - - - 0.846 - - cyclin L1a [Source:ZFIN;Acc:ZDB-GENE-050419-206]
7. wasla ENSDARG00000014113, ENSDARG00000113629, ENSDARG00000115471 1529 1.842 - 0.972 - - - - 0.870 - - Wiskott-Aldrich syndrome-like a [Source:ZFIN;Acc:ZDB-GENE-070209-220]
8. matn4 ENSDARG00000015947 10967 1.834 - 0.989 - - - 0.845 - - - matrilin 4 [Source:ZFIN;Acc:ZDB-GENE-050208-64]
9. fam3c ENSDARG00000056152 3833 1.814 - - - - - 0.995 - - 0.819 family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
10. LRP10 ENSDARG00000054539 1895 1.811 0.817 - - - - 0.994 - - - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]
11. ptgs1 ENSDARG00000052148 2443 1.809 - - - - - 0.994 - - 0.815 prostaglandin-endoperoxide synthase 1 [Source:ZFIN;Acc:ZDB-GENE-020530-1]
12. yif1a ENSDARG00000019636 2215 1.807 - 0.988 - - - - - - 0.819 Yip1 interacting factor homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6922]
13. si:dkey-153m14.1 si:dkey-153m14.1 4591 1.803 - 0.998 - - - - 0.805 - -
14. kifc3 ENSDARG00000054978 1220 1.792 0.798 - - - - 0.994 - - - kinesin family member C3 [Source:ZFIN;Acc:ZDB-GENE-030131-3724]
15. mllt4 mllt4 2939 1.79 0.793 0.997 - - - - - - -
16. nufip2 ENSDARG00000069066 3965 1.785 - 0.997 - - - - 0.788 - - nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
17. gdi2 ENSDARG00000005451, ENSDARG00000113039 11258 1.783 - - - - - 0.975 0.808 - - GDP dissociation inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2485]
18. IL17RD ENSDARG00000098359 2309 1.781 0.784 0.997 - - - - - - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
19. frmd8 ENSDARG00000073696 2661 1.78 - - - - - 0.964 0.816 - - FERM domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-090812-5]
20. nuf2 ENSDARG00000034624 2252 1.769 - - - - - 0.994 - - 0.775 NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
21. prpf6 ENSDARG00000091367 1868 1.768 - - - - - 0.994 - - 0.774 PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]
22. pitx2 ENSDARG00000036194 2279 1.767 - - - - - 0.992 0.775 - - paired-like homeodomain 2 [Source:ZFIN;Acc:ZDB-GENE-990714-27]
23. nccrp1 ENSDARG00000035326, ENSDARG00000113175 11385 1.766 - 0.835 - - - 0.931 - - - non-specific cytotoxic cell receptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-000210-13]
24. GRAMD1C ENSDARG00000076238 795 1.765 - 0.999 - - - - - - 0.766 GRAM domain containing 1c [Source:ZFIN;Acc:ZDB-GENE-050506-88]
25. pi4kaa ENSDARG00000076724 1949 1.761 0.765 - - - - 0.996 - - - phosphatidylinositol 4-kinase, catalytic, alpha a [Source:ZFIN;Acc:ZDB-GENE-100204-2]
26. ptbp1b ENSDARG00000031907, ENSDARG00000115714 3808 1.75 0.757 0.993 - - - - - - - polypyrimidine tract binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9796]
27. mob3a ENSDARG00000019113 2551 1.749 0.751 0.998 - - - - - - - MOB kinase activator 3A [Source:ZFIN;Acc:ZDB-GENE-030131-4091]
28. cul1a ENSDARG00000019239, ENSDARG00000113068, ENSDARG00000114068 2110 1.738 - - - - - 0.995 0.743 - - cullin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2603]
29. slc3a2a ENSDARG00000036427, ENSDARG00000112231 2967 1.738 - - - - - 0.996 0.742 - - solute carrier family 3 (amino acid transporter heavy chain), member 2a [Source:ZFIN;Acc:ZDB-GENE-000831-3]
30. apmap ENSDARG00000017422 2692 1.724 - 0.972 - - - - 0.752 - - adipocyte plasma membrane associated protein [Source:ZFIN;Acc:ZDB-GENE-020919-1]
31. HOMEZ HOMEZ 1824 1.723 - 0.998 - - - - 0.725 - -
32. tusc2b ENSDARG00000025340 2391 1.722 - 0.995 - - - - 0.727 - - tumor suppressor 2, mitochondrial calcium regulator b [Source:ZFIN;Acc:ZDB-GENE-040718-99]
33. capn2a ENSDARG00000091699 5924 1.72 - - - - - 0.963 0.757 - - calpain 2, (m/II) large subunit a [Source:ZFIN;Acc:ZDB-GENE-050320-69]
34. sart3 ENSDARG00000008032 2594 1.718 - - - - - 0.995 - - 0.723 squamous cell carcinoma antigen recognized by T cells 3 [Source:ZFIN;Acc:ZDB-GENE-040724-10]
35. urm1 ENSDARG00000091198, ENSDARG00000111234 1213 1.706 - 0.996 - - - - 0.710 - - ubiquitin related modifier 1 [Source:ZFIN;Acc:ZDB-GENE-091204-300]
36. GCA GCA 5211 1.705 - 0.988 - - - - 0.717 - -
37. perp ENSDARG00000063572 6423 1.703 - 0.986 - - - - 0.717 - - PERP, TP53 apoptosis effector [Source:ZFIN;Acc:ZDB-GENE-050104-1]
38. lsr ENSDARG00000099291 881 1.681 - - - - - - 0.880 - 0.801 lipolysis stimulated lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-050913-73]
39. chmp5b ENSDARG00000103718 1608 1.681 - - - - - - 0.859 - 0.822 charged multivesicular body protein 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1374]
40. NAALAD2 ENSDARG00000021383 704 1.678 0.867 - - - - - - - 0.811 N-acetylated alpha-linked acidic dipeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1025]
41. glulb ENSDARG00000100003, ENSDARG00000113742 19292 1.658 - 0.818 - - - 0.840 - - - glutamate-ammonia ligase (glutamine synthase) b [Source:ZFIN;Acc:ZDB-GENE-030131-8417]
42. clic1 ENSDARG00000103340 2235 1.65 0.856 - - - - - 0.794 - - chloride intracellular channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3202]
43. vps11 ENSDARG00000036338 421 1.632 0.829 - - - - - 0.803 - - vacuolar protein sorting 11 [Source:ZFIN;Acc:ZDB-GENE-050731-5]
44. man1b1 man1b1 3294 1.632 - - - - - - 0.819 - 0.813
45. EPT1 EPT1 1912 1.631 - - - - - - 0.866 - 0.765
46. cbfb ENSDARG00000040917 1422 1.63 0.790 - - - - - 0.840 - - core-binding factor, beta subunit [Source:ZFIN;Acc:ZDB-GENE-980526-440]
47. gnb4b ENSDARG00000115383 7457 1.628 0.811 - - - - - - - 0.817 guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
48. aqp3a ENSDARG00000003808 9044 1.627 - - - - - 0.877 0.750 - - aquaporin 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2826]
49. fam162a ENSDARG00000063344 1812 1.622 0.835 - - - - - 0.787 - - family with sequence similarity 162, member A [Source:ZFIN;Acc:ZDB-GENE-030131-8307]
50. magt1 ENSDARG00000058062 3903 1.613 0.866 - - - - - 0.747 - - magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
51. AL935186.4 ENSDARG00000110268 1701 1.606 0.740 - - - - - 0.866 - -
52. enpp4 ENSDARG00000006877, ENSDARG00000110396 994 1.6 - - - - - - 0.847 - 0.753 ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:ZFIN;Acc:ZDB-GENE-050417-444]
53. ATXN7 ENSDARG00000074804 1137 1.598 0.793 - - - - - 0.805 - - ataxin 7 [Source:ZFIN;Acc:ZDB-GENE-110621-1]
54. paf1 ENSDARG00000098432 1806 1.597 - - - - - - 0.837 - 0.760 PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
55. ssr3_1 ENSDARG00000014165, ENSDARG00000111483 5702 1.595 - - - - - - 0.866 - 0.729 signal sequence receptor, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-9134]
56. mto1 ENSDARG00000055679 859 1.592 0.834 - - - - - - - 0.758 mitochondrial tRNA translation optimization 1 [Source:ZFIN;Acc:ZDB-GENE-070209-253]
57. ap5s1 ENSDARG00000076755 318 1.584 0.820 - - - - - 0.764 - - adaptor related protein complex 5 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-090313-184]
58. cby1 ENSDARG00000077409, ENSDARG00000113018 772 1.584 0.815 - - - - - - - 0.769 chibby homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5074]
59. ube2g1b ENSDARG00000069527 5376 1.583 - - - - - - 0.846 - 0.737 ubiquitin-conjugating enzyme E2G 1b (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2939]
60. srp68 ENSDARG00000020820 1719 1.578 - - - - - - 0.831 - 0.747 signal recognition particle 68 [Source:ZFIN;Acc:ZDB-GENE-040831-3]
61. BX296538.3 BX296538.3 813 1.573 - - - - - - 0.810 - 0.763
62. tfg ENSDARG00000003641, ENSDARG00000115188 3834 1.572 - - - - - - 0.776 - 0.796 trk-fused gene [Source:ZFIN;Acc:ZDB-GENE-030131-8410]
63. sult6b1 ENSDARG00000086826 2070 1.57 - - - - - - 0.772 - 0.798 sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
64. nfe2l1b ENSDARG00000076533, ENSDARG00000114820 1574 1.568 0.831 - - - - - 0.737 - - nuclear factor, erythroid 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]
65. stxbp3 ENSDARG00000008142 2604 1.563 0.789 - - - - - - - 0.774 syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
66. tom1 ENSDARG00000104581 1457 1.557 0.840 - - - - - 0.717 - - target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
67. cox17 ENSDARG00000069920, ENSDARG00000114117 5591 1.556 0.730 0.826 - - - - - - - cytochrome c oxidase copper chaperone COX17 [Source:ZFIN;Acc:ZDB-GENE-040912-91]
68. ppp4cb ENSDARG00000076439 1693 1.554 - - - - - - 0.817 - 0.737 protein phosphatase 4, catalytic subunit b [Source:ZFIN;Acc:ZDB-GENE-080219-32]
69. CABZ01092303.1 CABZ01092303.1 8825 1.551 0.810 - - - - - - - 0.741
70. trim71 ENSDARG00000075593 2750 1.549 - - - - - - 0.810 - 0.739 tripartite motif containing 71, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040128-1]
71. ide ENSDARG00000075570 4331 1.547 - - - - - - 0.764 - 0.783 insulin-degrading enzyme [Source:ZFIN;Acc:ZDB-GENE-070410-85]
72. clpxb ENSDARG00000067796 1918 1.547 0.815 - - - - - 0.732 - - caseinolytic mitochondrial matrix peptidase chaperone subunit b [Source:ZFIN;Acc:ZDB-GENE-130404-1]
73. polr3a ENSDARG00000102569 1072 1.543 - - - - - - 0.752 - 0.791 polymerase (RNA) III (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-050208-103]
74. brd4 ENSDARG00000078904 5367 1.542 - - - 0.761 - - 0.781 - - bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
75. CASKIN2_1 CASKIN2_1 2299 1.542 0.809 - - - - - - - 0.733
76. lamb1b ENSDARG00000045524, ENSDARG00000116025 613 1.539 - - - - - - 0.768 - 0.771 laminin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-041210-197]
77. C21H5orf15 C21H5orf15 2318 1.537 - - - - - - 0.753 - 0.784
78. stxbp2 ENSDARG00000007603 1646 1.532 - - 0.716 - - - 0.816 - - syntaxin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2482]
79. bag6 ENSDARG00000075892 3782 1.53 0.729 - - - - - 0.801 - - BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
80. apod apod 344 1.528 - - - - - - 0.782 - 0.746
81. EPHA2 EPHA2 867 1.528 - - - - - - 0.732 - 0.796
82. CR848664.2 CR848664.2 876 1.527 - - - - - - 0.711 - 0.816
83. dlx4b ENSDARG00000071560 446 1.52 - - - 0.744 - - - - 0.776 distal-less homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-990415-50]
84. zgc:113184 ENSDARG00000098181 500 1.519 - - - 0.715 - - - - 0.804 zgc:113184 [Source:ZFIN;Acc:ZDB-GENE-050522-9]
85. stam2 ENSDARG00000005318 2980 1.519 - - - - - - 0.779 - 0.740 signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 [Source:ZFIN;Acc:ZDB-GENE-041114-64]
86. pef1 ENSDARG00000023989 3013 1.518 - - - - - - 0.795 - 0.723 penta-EF-hand domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-259]
87. xpo1a ENSDARG00000078041 3544 1.514 0.749 - - - - - 0.765 - - exportin 1 (CRM1 homolog, yeast) a [Source:ZFIN;Acc:ZDB-GENE-050309-201]
88. hat1 ENSDARG00000034916 5712 1.512 0.733 - - - - - - - 0.779 histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
89. xpnpep1 ENSDARG00000029011 1723 1.511 - - - - - - 0.788 - 0.723 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-999]
90. C3H16orf72 C3H16orf72 2059 1.506 0.782 - - 0.724 - - - - -
91. b4galt4 ENSDARG00000104042 1479 1.501 - - - - - 0.774 0.727 - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-041114-103]
92. si:dkey-238c7.16 ENSDARG00000069537, ENSDARG00000111432 5140 1.497 - - - - - - 0.707 - 0.790 si:dkey-238c7.16 [Source:ZFIN;Acc:ZDB-GENE-030131-4169]
93. C5H8orf4 C5H8orf4 2740 1.494 0.781 - - - - - - - 0.713
94. zgc:91909 ENSDARG00000021287 1488 1.491 0.731 - - - - - 0.760 - - zgc:91909 [Source:ZFIN;Acc:ZDB-GENE-040704-16]
95. usf2 ENSDARG00000020228 2667 1.484 0.747 - - - - - 0.737 - - upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
96. snx27a ENSDARG00000033804 2249 1.483 0.728 - - - - - - - 0.755 sorting nexin family member 27a [Source:ZFIN;Acc:ZDB-GENE-060503-371]
97. disp1 ENSDARG00000044417 603 1.481 - - - 0.701 - - 0.780 - - dispatched homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030911-7]
98. cldnf ENSDARG00000043133 1006 1.478 0.758 - - - - - - - 0.720 claudin f [Source:ZFIN;Acc:ZDB-GENE-010328-6]
99. lbr ENSDARG00000014013 4835 1.478 0.707 - - - - - 0.771 - - lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
100. RBM6 ENSDARG00000077060 3521 1.475 0.748 - - - - - 0.727 - - RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]

There are 1346 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA