Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-285c6.4

Gene Name Gene ID Reads Annotation
si:ch211-285c6.4 ENSDARG00000095410 4 si:ch211-285c6.4 [Source:ZFIN;Acc:ZDB-GENE-041001-97]










Genes with expression patterns similar to si:ch211-285c6.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-285c6.4 ENSDARG00000095410 4 2 1.000 - - - 1.000 - - - - si:ch211-285c6.4 [Source:ZFIN;Acc:ZDB-GENE-041001-97]
2. erap2 ENSDARG00000098618 16 1.708 1.000 - - - 0.708 - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
3. unc13d ENSDARG00000078249 91 1.5 0.766 - - - 0.734 - - - - unc-13 homolog D (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-110411-188]
4. si:dkey-91f15.8 18 1 1.000 - - - - - - - - si:dkey-91f15.8, transcript variant X1
5. dennd2db ENSDARG00000030250 24 1 1.000 - - - - - - - - DENN/MADD domain containing 2Db [Source:ZFIN;Acc:ZDB-GENE-041114-34]
6. CABZ01064671.1 ENSDARG00000039935 21 1 1.000 - - - - - - - -
7. SPTBN4 ENSDARG00000092624 6 1 - - - - 1.000 - - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
8. soat2 ENSDARG00000059824 62 1 1.000 - - - - - - - - sterol O-acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-061013-742]
9. efhb ENSDARG00000069703 9 1 1.000 - - - - - - - - EF-hand domain family, member B [Source:ZFIN;Acc:ZDB-GENE-091001-1]
10. C3 C3 46 1 1.000 - - - - - - - -
11. ctssb.2 ctssb.2 122 1 1.000 - - - - - - - -
12. EPS8 78 1 1.000 - - - - - - - - epidermal growth factor receptor pathway substrate 8, transcript variant X14
13. clcf1 ENSDARG00000076140 5 1 1.000 - - - - - - - - cardiotrophin-like cytokine factor 1 [Source:ZFIN;Acc:ZDB-GENE-110411-244]
14. CR354549.1 ENSDARG00000117215 3 1 1.000 - - - - - - - -
15. psmb10 ENSDARG00000043781 1 1 1.000 - - - - - - - - proteasome subunit beta 10 [Source:ZFIN;Acc:ZDB-GENE-040718-278]
16. chmp2ba ENSDARG00000068683, ENSDARG00000113182, ENSDARG00000114167 20 1 1.000 - - - - - - - - charged multivesicular body protein 2Ba [Source:ZFIN;Acc:ZDB-GENE-070628-3]
17. nme4 ENSDARG00000088390 87 1 1.000 - - - - - - - - NME/NM23 nucleoside diphosphate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1043]
18. si:ch211-113a14.17 15 1 - - - - 1.000 - - - - si:ch211-113a14.17
19. si:ch211-139k8.3 si:ch211-139k8.3 1 1 - - - - 1.000 - - - -
20. ENSDARG00000088134 ENSDARG00000088134 16 1 1.000 - - - - - - - -
21. cldn10l2 ENSDARG00000105042 11 1 1.000 - - - - - - - - claudin 10-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9598]
22. CABZ01057951.1 CABZ01057951.1 10 1 1.000 - - - - - - - -
23. zgc:113229 ENSDARG00000037398, ENSDARG00000117068 14 1 1.000 - - - - - - - - zgc:113229 [Source:ZFIN;Acc:ZDB-GENE-050417-475]
24. U2_4 U2_4 41 1 1.000 - - - - - - - -
25. si:busm1-228j01.5 si:busm1-228j01.5 9 1 - - - - 1.000 - - - -
26. chtopb ENSDARG00000070430 29 1 1.000 - - - - - - - - chromatin target of PRMT1b [Source:ZFIN;Acc:ZDB-GENE-061013-712]
27. si:dkey-39e8.5 si:dkey-39e8.5 2 1 1.000 - - - - - - - -
28. pld6 ENSDARG00000059951 17 1 1.000 - - - - - - - - phospholipase D family, member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3825]
29. tbc1d25 ENSDARG00000075333 126 1 1.000 - - - - - - - - TBC1 domain family, member 25 [Source:ZFIN;Acc:ZDB-GENE-041111-25]
30. socs9 ENSDARG00000101985 44 1 1.000 - - - - - - - - suppressor of cytokine signaling 9 [Source:ZFIN;Acc:ZDB-GENE-030131-4065]
31. atg16l2 ENSDARG00000043238, ENSDARG00000109384 10 1 1.000 - - - - - - - - ATG16 autophagy related 16-like 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-197]
32. ENSDARG00000089100 ENSDARG00000089100 5 1 1.000 - - - - - - - -
33. pde6a ENSDARG00000000380 40 1 1.000 - - - - - - - - phosphodiesterase 6A, cGMP-specific, rod, alpha [Source:ZFIN;Acc:ZDB-GENE-030616-42]
34. si:dkeyp-69b9.6 ENSDARG00000014825 5 1 - - - - 1.000 - - - - si:dkeyp-69b9.6 [Source:ZFIN;Acc:ZDB-GENE-100922-227]
35. parp12a ENSDARG00000042496 82 1 1.000 - - - - - - - - poly (ADP-ribose) polymerase family, member 12a [Source:ZFIN;Acc:ZDB-GENE-050419-6]
36. BX004993.1 BX004993.1 1 1 - - - - 1.000 - - - -
37. slc13a5 slc13a5 15 1 1.000 - - - - - - - -
38. IQCK ENSDARG00000076831, ENSDARG00000112508 6 1 1.000 - - - - - - - - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
39. LGALS3BP LGALS3BP 51 1 - - - - 1.000 - - - -
40. gatsl3 7 1 1.000 - - - - - - - - GATS protein-like 3
41. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 1 1.000 - - - - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
42. ccdc170 ENSDARG00000016161 18 1 1.000 - - - - - - - - coiled-coil domain containing 170 [Source:ZFIN;Acc:ZDB-GENE-070112-162]
43. ctc1 ENSDARG00000070119 8 1 1.000 - - - - - - - - CTS telomere maintenance complex component 1 [Source:ZFIN;Acc:ZDB-GENE-061103-271]
44. BX119916.1 BX119916.1 19 1 1.000 - - - - - - - -
45. mtp 1 1 - - - - 1.000 - - - - microsomal triglyceride transfer protein
46. ELMO1 ENSDARG00000098753 114 1 1.000 - - - - - - - - engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
47. LRRK1_1 LRRK1_1 11 1 1.000 - - - - - - - -
48. BX004873.3 BX004873.3 59 1 1.000 - - - - - - - -
49. rnf213b ENSDARG00000103551 63 1 1.000 - - - - - - - - ring finger protein 213b [Source:ZFIN;Acc:ZDB-GENE-110822-1]
50. si:ch211-229l10.10 si:ch211-229l10.10 8 1 1.000 - - - - - - - -
51. fabp11b ENSDARG00000002311 354 1 1.000 - - - - - - - - fatty acid binding protein 11b [Source:ZFIN;Acc:ZDB-GENE-050522-391]
52. slc7a9 ENSDARG00000005894 29 1 1.000 - - - - - - - - solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9 [Source:ZFIN;Acc:ZDB-GENE-080116-2]
53. plcd3b ENSDARG00000079572 64 1 1.000 - - - - - - - - phospholipase C, delta 3b [Source:ZFIN;Acc:ZDB-GENE-081222-2]
54. ABCC6 ABCC6 5 1 1.000 - - - - - - - -
55. dolk ENSDARG00000076991 7 1 - - - - 1.000 - - - - dolichol kinase [Source:ZFIN;Acc:ZDB-GENE-070410-59]
56. si:dkey-15h19.3 si:dkey-15h19.3 5 1 1.000 - - - - - - - -
57. CABZ01059392.1 ENSDARG00000063108 3 1 1.000 - - - - - - - - uncharacterized LOC100334305 [Source:NCBI gene;Acc:100334305]
58. si:dkey-149m13.4 ENSDARG00000114536 2 1 1.000 - - - - - - - - si:dkey-149m13.4 [Source:ZFIN;Acc:ZDB-GENE-110914-34]
59. FKBP15_2 FKBP15_2 40 1 1.000 - - - - - - - -
60. zgc:136639os zgc:136639os 2 1 1.000 - - - - - - - -
61. KCNJ12 KCNJ12 17 1 1.000 - - - - - - - -
62. CU855880.2 CU855880.2 3 1 1.000 - - - - - - - -
63. allc ENSDARG00000042562 12 1 - - - - 1.000 - - - - allantoicase [Source:ZFIN;Acc:ZDB-GENE-040718-471]
64. GIGYF1_2 GIGYF1_2 22 1 1.000 - - - - - - - -
65. MYADM_1 ENSDARG00000086815 1 1 - - - - 1.000 - - - - myeloid associated differentiation marker [Source:HGNC Symbol;Acc:HGNC:7544]
66. pex11b ENSDARG00000069147 1 1 - - - - 1.000 - - - - peroxisomal biogenesis factor 11 beta [Source:ZFIN;Acc:ZDB-GENE-060825-289]
67. kcnq2a ENSDARG00000075307 7 1 1.000 - - - - - - - - potassium voltage-gated channel, KQT-like subfamily, member 2a [Source:ZFIN;Acc:ZDB-GENE-080220-37]
68. zgc:172075 ENSDARG00000076146 93 1 1.000 - - - - - - - - zgc:172075 [Source:ZFIN;Acc:ZDB-GENE-080215-3]
69. ca15b ENSDARG00000040510 5 1 1.000 - - - - - - - - carbonic anhydrase XVb [Source:ZFIN;Acc:ZDB-GENE-040426-2222]
70. cyp3c4 ENSDARG00000070021 95 1 1.000 - - - - - - - - cytochrome P450, family 3, subfamily C, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-060929-96]
71. PAQR8 ENSDARG00000088828 26 1 1.000 - - - - - - - - progestin and adipoQ receptor family member VIII [Source:ZFIN;Acc:ZDB-GENE-030728-3]
72. si:ch211-161h7.6 si:ch211-161h7.6 129 1 1.000 - - - - - - - -
73. mbnl3 ENSDARG00000016085 6 1 - - - - 1.000 - - - - muscleblind-like splicing regulator 3 [Source:ZFIN;Acc:ZDB-GENE-081002-3]
74. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1 - - - - 1.000 - - - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
75. aglb ENSDARG00000100352 22 1 - - - - 1.000 - - - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b [Source:ZFIN;Acc:ZDB-GENE-050309-54]
76. CABZ01055343.1 CABZ01055343.1 12 1 - - - - 1.000 - - - -
77. cx32.3 ENSDARG00000041787 33 1 1.000 - - - - - - - - connexin 32.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1337]
78. CR382283.2 CR382283.2 1 1 - - - - 1.000 - - - -
79. zgc:173702_1 ENSDARG00000110229 24 1 1.000 - - - - - - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
80. asah1a ENSDARG00000037091, ENSDARG00000112187 390 1 1.000 - - - - - - - - N-acylsphingosine amidohydrolase (acid ceramidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041010-191]
81. pth1b ENSDARG00000091961, ENSDARG00000115353 5 1 - - - - 1.000 - - - - parathyroid hormone 1b [Source:ZFIN;Acc:ZDB-GENE-040623-2]
82. sh2d3cb ENSDARG00000104555, ENSDARG00000116530 21 1 1.000 - - - - - - - - SH2 domain containing 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1052]
83. TMC5 ENSDARG00000013252 22 1 1.000 - - - - - - - - transmembrane channel like 5 [Source:ZFIN;Acc:ZDB-GENE-120411-6]
84. CDH12_1 CDH12_1 57 1 1.000 - - - - - - - -
85. zgc:171516 zgc:171516 5 1 - - - - 1.000 - - - -
86. ASTN2 1 1 1.000 - - - - - - - - astrotactin 2
87. tusc3 ENSDARG00000078854 4 1 - - - - 1.000 - - - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
88. ninj2 ENSDARG00000079824 1 1 - - - - 1.000 - - - - ninjurin 2 [Source:ZFIN;Acc:ZDB-GENE-100422-19]
89. CABZ01112215.1 CABZ01112215.1 23 1 1.000 - - - - - - - -
90. BX927064.1 BX927064.1 46 1 1.000 - - - - - - - -
91. frzb ENSDARG00000018383 93 1 1.000 - - - - - - - - frizzled related protein [Source:ZFIN;Acc:ZDB-GENE-990715-1]
92. CR388416.2 CR388416.2 3 1 1.000 - - - - - - - -
93. zgc:165453 ENSDARG00000078183 3 1 - - - - 1.000 - - - - zgc:165453 [Source:ZFIN;Acc:ZDB-GENE-070720-13]
94. zgc:173556 82 1 1.000 - - - - - - - - zgc:173556
95. si:dkey-58f10.7_1 ENSDARG00000091972, ENSDARG00000093350 2 1 1.000 - - - - - - - - si:dkey-58f10.7 [Source:ZFIN;Acc:ZDB-GENE-060526-321]
96. CABZ01117519.1 CABZ01117519.1 1 1 - - - - 1.000 - - - -
97. pdgfb pdgfb 5 1 - - - - 1.000 - - - -
98. sytl4 ENSDARG00000102433 19 1 1.000 - - - - - - - - synaptotagmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-070209-217]
99. si:ch211-53m15.2 ENSDARG00000094928 1 1 - - - - 1.000 - - - - si:ch211-53m15.2 [Source:ZFIN;Acc:ZDB-GENE-100922-24]
100. atf1 ENSDARG00000044301, ENSDARG00000109865 2 1 - - - - 1.000 - - - - activating transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4334]

There are 313 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA