Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-284a16.4

Gene Name Gene ID Reads Annotation
si:ch211-284a16.4 si:ch211-284a16.4 1










Genes with expression patterns similar to si:ch211-284a16.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-284a16.4 si:ch211-284a16.4 1 1 - - - 1.000 - - - - -
2. si:ch211-15j21.2 si:ch211-15j21.2 13 1 - - - 1.000 - - - - -
3. lhx8a ENSDARG00000002330 25 0.966 - - - 0.966 - - - - - LIM homeobox 8a [Source:ZFIN;Acc:ZDB-GENE-031008-2]
4. zdhhc2 ENSDARG00000034757, ENSDARG00000110118 28 0.949 - - - 0.949 - - - - - zinc finger, DHHC-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-58]
5. foxe1 ENSDARG00000079266 6 0.941 - - - 0.941 - - - - - forkhead box E1 [Source:ZFIN;Acc:ZDB-GENE-061116-1]
6. ccna2 ENSDARG00000011094 4 0.917 - - - 0.917 - - - - - cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
7. CABZ01048021.1 CABZ01048021.1 15 0.916 - - - 0.916 - - - - -
8. tagln ENSDARG00000045408 48 0.914 - - - 0.914 - - - - - transgelin [Source:ZFIN;Acc:ZDB-GENE-070912-1]
9. BX323876.3 BX323876.3 19 0.91 - - - 0.910 - - - - -
10. npvf ENSDARG00000036227 23 0.903 - - - 0.903 - - - - - neuropeptide VF precursor [Source:ZFIN;Acc:ZDB-GENE-070424-226]
11. si:dkey-4p15.5 ENSDARG00000086272 7 0.876 - - - 0.876 - - - - - si:dkey-4p15.5 [Source:ZFIN;Acc:ZDB-GENE-121214-193]
12. CCDC89 CCDC89 40 0.875 - - - 0.875 - - - - -
13. slc1a3b ENSDARG00000043148 431 0.874 - - - 0.874 - - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]
14. vax2 ENSDARG00000058702 175 0.87 - - - 0.870 - - - - - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
15. vax1 ENSDARG00000021916, ENSDARG00000114230 152 0.861 - - - 0.861 - - - - - ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
16. zgc:171531 zgc:171531 77 0.842 - - - 0.842 - - - - -
17. pou2f2b pou2f2b 134 0.813 - - - 0.813 - - - - -
18. si:dkeyp-52c3.1 3 0.799 - - - 0.799 - - - - - si:dkeyp-52c3.1, transcript variant X1
19. mcm5_1 ENSDARG00000019507 10 0.799 - - - 0.799 - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
20. SGSM1_1 SGSM1_1 40 0.799 - - - 0.799 - - - - -
21. si:dkeyp-69b9.2 si:dkeyp-69b9.2 25 0.799 - - - 0.799 - - - - -
22. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 0.799 - - - 0.799 - - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
23. SSTR2 SSTR2 12 0.799 - - - 0.799 - - - - -
24. FBXO15 ENSDARG00000016897 4 0.799 - - - 0.799 - - - - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
25. hcrt ENSDARG00000070932 4 0.799 - - - 0.799 - - - - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
26. tlr5a ENSDARG00000044415 3 0.799 - - - 0.799 - - - - - toll-like receptor 5a [Source:ZFIN;Acc:ZDB-GENE-040219-14]
27. CREBBP CREBBP 8 0.799 - - - 0.799 - - - - -
28. TRAF2 TRAF2 13 0.799 - - - 0.799 - - - - -
29. BX465203.1 ENSDARG00000113985 8 0.799 - - - 0.799 - - - - -
30. U1_43 U1_43 0 0.799 - - - 0.799 - - - - -
31. CABZ01080134.1 CABZ01080134.1 2 0.799 - - - 0.799 - - - - -
32. zpcx ENSDARG00000059252, ENSDARG00000111002 33 0.799 - - - 0.799 - - - - - zona pellucida protein C [Source:ZFIN;Acc:ZDB-GENE-040824-1]
33. EXD1 ENSDARG00000098669 27 0.799 - - - 0.799 - - - - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
34. TRPC7 TRPC7 1 0.799 - - - 0.799 - - - - -
35. CU302326.1 CU302326.1 1 0.799 - - - 0.799 - - - - -
36. scpp1 ENSDARG00000090416 1 0.799 - - - 0.799 - - - - - secretory calcium-binding phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-090424-1]
37. PLA2G4C_1 PLA2G4C_1 2 0.799 - - - 0.799 - - - - -
38. si:ch211-105d18.7 si:ch211-105d18.7 6 0.799 - - - 0.799 - - - - -
39. IMPG2_1 IMPG2_1 2 0.799 - - - 0.799 - - - - -
40. htra3a ENSDARG00000052895 28 0.799 - - - 0.799 - - - - - HtrA serine peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-040801-245]
41. CR450840.2 CR450840.2 1 0.799 - - - 0.799 - - - - -
42. si:dkeyp-85d8.6 si:dkeyp-85d8.6 2 0.799 - - - 0.799 - - - - -
43. CU856520.1 ENSDARG00000098941 2 0.799 - - - 0.799 - - - - -
44. STX1A ENSDARG00000058994 0 0.799 - - - 0.799 - - - - - syntaxin 1A (brain) [Source:ZFIN;Acc:ZDB-GENE-100802-1]
45. U1_1 U1_1 0 0.799 - - - 0.799 - - - - -
46. BX470196.1 BX470196.1 9 0.799 - - - 0.799 - - - - -
47. CABZ01016604.1 CABZ01016604.1 12 0.799 - - - 0.799 - - - - -
48. adcy9 ENSDARG00000100869 1 0.799 - - - 0.799 - - - - - adenylate cyclase 9 [Source:ZFIN;Acc:ZDB-GENE-050208-455]
49. si:dkey-70p6.1 ENSDARG00000092039, ENSDARG00000114631 19 0.799 - - - 0.799 - - - - - si:dkey-70p6.1 [Source:ZFIN;Acc:ZDB-GENE-040724-140]
50. si:ch73-21k16.5 ENSDARG00000078770 7 0.799 - - - 0.799 - - - - - si:ch73-21k16.5 [Source:ZFIN;Acc:ZDB-GENE-030131-8374]
51. si:dkey-203c4.2 si:dkey-203c4.2 4 0.799 - - - 0.799 - - - - -
52. bend5 ENSDARG00000075624 10 0.799 - - - 0.799 - - - - - BEN domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-081104-460]
53. si:ch211-131e11.15 si:ch211-131e11.15 0 0.799 - - - 0.799 - - - - -
54. si:dkeyp-33c10.5 11 0.799 - - - 0.799 - - - - - si:dkeyp-33c10.5, transcript variant X2
55. vtg3 ENSDARG00000016448 8 0.799 - - - 0.799 - - - - - vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]
56. BX005442.2 ENSDARG00000111949 0 0.799 - - - 0.799 - - - - -
57. MYL2 MYL2 7 0.799 - - - 0.799 - - - - -
58. U1_24 U1_24 0 0.799 - - - 0.799 - - - - -
59. pabpc1l ENSDARG00000002597, ENSDARG00000112364 3 0.799 - - - 0.799 - - - - - poly(A) binding protein, cytoplasmic 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-5836]
60. trmt13 ENSDARG00000102846, ENSDARG00000114348 13 0.799 - - - 0.799 - - - - - tRNA methyltransferase 13 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050327-19]
61. U1_27 U1_27 0 0.799 - - - 0.799 - - - - -
62. CR626884.3 ENSDARG00000104648 1 0.799 - - - 0.799 - - - - -
63. Metazoa_SRP_4 Metazoa_SRP_4 0 0.799 - - - 0.799 - - - - -
64. zgc:158654 19 0.799 - - - 0.799 - - - - - zgc:158654, transcript variant X1
65. CU468142.1 CU468142.1 6 0.799 - - - 0.799 - - - - -
66. CU181898.1 CU181898.1 0 0.799 - - - 0.799 - - - - -
67. si:dkey-78k22.2 si:dkey-78k22.2 2 0.799 - - - 0.799 - - - - -
68. cd44a ENSDARG00000087863 4 0.799 - - - 0.799 - - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
69. ighv14-1 ENSDARG00000096418 17 0.799 - - - 0.799 - - - - - immunoglobulin heavy variable 14-1 [Source:ZFIN;Acc:ZDB-GENE-040514-42]
70. guca1c ENSDARG00000030758 9 0.799 - - - 0.799 - - - - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
71. CABZ01060030.1 ENSDARG00000106579 55 0.799 - - - 0.799 - - - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
72. BX321875.3 ENSDARG00000112569 24 0.799 - - - 0.799 - - - - -
73. zgc:114037_5 6 0.799 - - - 0.799 - - - - - zgc:114037
74. ryr2b ENSDARG00000003706 6 0.799 - - - 0.799 - - - - - ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
75. si:ch211-15p9.2 ENSDARG00000062241 1 0.799 - - - 0.799 - - - - - si:ch211-15p9.2 [Source:ZFIN;Acc:ZDB-GENE-060503-577]
76. ONECUT2 ENSDARG00000090387 8 0.799 - - - 0.799 - - - - - one cut homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-120215-73]
77. gpr155a ENSDARG00000090804 27 0.799 - - - 0.799 - - - - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
78. si:ch211-198o19.2 si:ch211-198o19.2 0 0.799 - - - 0.799 - - - - -
79. inpp5k inpp5k 2 0.799 - - - 0.799 - - - - -
80. hyal6 ENSDARG00000038166, ENSDARG00000111343 2 0.799 - - - 0.799 - - - - - hyaluronoglucosaminidase 6 [Source:ZFIN;Acc:ZDB-GENE-070112-2372]
81. BX005421.6 BX005421.6 4 0.799 - - - 0.799 - - - - -
82. top3b ENSDARG00000027586 8 0.799 - - - 0.799 - - - - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
83. si:dkey-111b14.1 si:dkey-111b14.1 3 0.799 - - - 0.799 - - - - -
84. GM2A ENSDARG00000088439 55 0.799 - - - 0.799 - - - - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
85. FMNL1 FMNL1 7 0.799 - - - 0.799 - - - - -
86. mtp 1 0.799 - - - 0.799 - - - - - microsomal triglyceride transfer protein
87. arhgap23b ENSDARG00000026840 6 0.799 - - - 0.799 - - - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
88. bard1 ENSDARG00000076733 40 0.799 - - - 0.799 - - - - - BRCA1 associated RING domain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5883]
89. dcst2 ENSDARG00000088693 1 0.799 - - - 0.799 - - - - - DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
90. si:ch211-14a17.7 ENSDARG00000038720, ENSDARG00000115206 1 0.799 - - - 0.799 - - - - - si:ch211-14a17.7 [Source:ZFIN;Acc:ZDB-GENE-030616-590]
91. angptl1 angptl1 82 0.792 - - - 0.792 - - - - -
92. nkx2.1a nkx2.1a 156 0.791 - - - 0.791 - - - - -
93. nkx2.5 ENSDARG00000018004, ENSDARG00000116714 23 0.771 - - - 0.771 - - - - - NK2 homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-321]
94. nkx2.2b ENSDARG00000101549 266 0.758 - - - 0.758 - - - - - NK2 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-050217-3]
95. CABZ01072853.1 CABZ01072853.1 35 0.753 - - - 0.753 - - - - -
96. gpx3 ENSDARG00000043342 101 0.751 - - - 0.751 - - - - - glutathione peroxidase 3 [Source:ZFIN;Acc:ZDB-GENE-070222-3]
97. cnih2 ENSDARG00000043662, ENSDARG00000110467, ENSDARG00000113176 74 0.751 - - - 0.751 - - - - - cornichon family AMPA receptor auxiliary protein 2 [Source:ZFIN;Acc:ZDB-GENE-050320-96]
98. nkx2.1b nkx2.1b 125 0.749 - - - 0.749 - - - - -
99. BX640518.1 BX640518.1 24 0.744 - - - 0.744 - - - - -
100. vmhcl 119 0.742 - - - 0.742 - - - - - ventricular myosin heavy chain-like

There are 19 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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