Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-283g2.2

Gene Name Gene ID Reads Annotation
si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]










Genes with expression patterns similar to si:ch211-283g2.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
2. itpr2 ENSDARG00000011909 3 2.65 - 1.000 - - 0.803 0.847 - - - inositol 1,4,5-trisphosphate receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050419-192]
3. b3galtla b3galtla 111 1.979 - 1.000 - - - - - 0.979 -
4. aatkb ENSDARG00000104442 392 1.975 - 1.000 - - - - - 0.975 - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
5. vcam1 vcam1 243 1.927 - 1.000 - - - - - 0.927 -
6. si:ch211-120c15.1 si:ch211-120c15.1 20 1.916 - 1.000 - - - 0.916 - - -
7. ca10b ENSDARG00000009568 8 1.913 - 1.000 - - - - 0.913 - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
8. CU457778.2 ENSDARG00000109381 2 1.91 - 1.000 0.910 - - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100329258]
9. ABHD12B_1 ABHD12B_1 57 1.908 - 1.000 - - - - 0.908 - -
10. mtus2 mtus2 22 1.869 - 1.000 - - - - 0.869 - -
11. urgcp ENSDARG00000036767 6 1.869 - 1.000 - - - - 0.869 - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
12. traf1 ENSDARG00000069482 50 1.869 - 1.000 - - - - 0.869 - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
13. PCDH10 PCDH10 7 1.869 - 1.000 - - - - 0.869 - -
14. si:ch211-199m9.2 si:ch211-199m9.2 9 1.869 - 1.000 - - - - 0.869 - -
15. phf21aa ENSDARG00000006878 31 1.869 - 1.000 - - - - 0.869 - - PHD finger protein 21Aa [Source:ZFIN;Acc:ZDB-GENE-050208-99]
16. si:ch211-237l4.6 ENSDARG00000056915 49 1.849 - 1.000 - - - - 0.849 - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
17. ZNF70_9 ZNF70_9 1 1.819 - 1.000 - - - 0.819 - - -
18. apnl ENSDARG00000090900 21 1.819 - 1.000 - - - 0.819 - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
19. plscr3a ENSDARG00000093078 7 1.803 - 1.000 - - 0.803 - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
20. si:ch73-92e20.2 si:ch73-92e20.2 2 1.803 - 1.000 - - 0.803 - - - -
21. NFATC4 ENSDARG00000054162 44 1.801 - 1.000 - - - - 0.801 - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
22. cyp46a1 cyp46a1 43 1.796 - - 0.891 - - - 0.905 - -
23. sergef ENSDARG00000070986, ENSDARG00000111782 48 1.792 - 1.000 - - - - 0.792 - - secretion regulating guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-061220-11]
24. si:ch73-173m3.3 si:ch73-173m3.3 425 1.779 - 0.872 - - - - - 0.907 -
25. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 1.777 - - - - 0.803 - - 0.974 - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
26. TFPT ENSDARG00000089572, ENSDARG00000111694 112 1.767 - 0.783 - - - - - 0.984 - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
27. si:dkey-199m13.8 si:dkey-199m13.8 61 1.752 - 1.000 - - - 0.752 - - -
28. slc9a3.2 ENSDARG00000036722 31 1.745 - - 0.941 - - - 0.804 - - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-640]
29. FP236851.1 FP236851.1 10 1.745 - 1.000 - - 0.745 - - - -
30. dclre1a ENSDARG00000091768 94 1.742 - 1.000 - - - - 0.742 - - DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-124]
31. zgc:152698 32 1.735 - 1.000 - - 0.735 - - - - zgc:152698
32. wdr17 ENSDARG00000075098 83 1.727 - 1.000 - - - - 0.727 - - WD repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-090313-131]
33. s100a1 ENSDARG00000015543 274 1.723 - 0.937 - - - 0.786 - - - S100 calcium binding protein A1 [Source:ZFIN;Acc:ZDB-GENE-040916-1]
34. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 1.721 - 0.852 - - - - 0.869 - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
35. CIT CIT 212 1.715 - - - - - - 0.736 0.979 -
36. ponzr1 ENSDARG00000090444 540 1.699 - - 0.782 - - - - 0.917 - plac8 onzin related protein 1 [Source:ZFIN;Acc:ZDB-GENE-070727-1]
37. irx4a ENSDARG00000035648 71 1.688 - - - - - 0.819 0.869 - - iroquois homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1825]
38. UBAC2_1 UBAC2_1 23 1.682 - 0.768 0.914 - - - - - -
39. zgc:123068 ENSDARG00000017489 15 1.675 - - - - 0.803 - 0.872 - - zgc:123068 [Source:ZFIN;Acc:ZDB-GENE-051030-98]
40. CR762480.2 ENSDARG00000102728 1 1.672 - - - - 0.803 - 0.869 - -
41. si:ch211-12e1.5 si:ch211-12e1.5 14 1.672 - - - - 0.803 - 0.869 - -
42. ZC3H12A ENSDARG00000005271 5 1.672 - - - - 0.803 - 0.869 - - zinc finger CCCH-type containing 12A [Source:ZFIN;Acc:ZDB-GENE-110411-6]
43. CU062628.1 ENSDARG00000090267 3 1.622 - - - - 0.803 0.819 - - - trypsin-2-like [Source:NCBI gene;Acc:103908930]
44. CABZ01081747.2 CABZ01081747.2 9 1.608 - - - - - 0.819 0.789 - -
45. zgc:109986 ENSDARG00000102608 348 1.587 - - - - - - 0.815 0.772 - zgc:109986 [Source:ZFIN;Acc:ZDB-GENE-050522-136]
46. neu3.2 ENSDARG00000010047, ENSDARG00000117176 68 1.577 - 0.774 - - 0.803 - - - - sialidase 3 (membrane sialidase), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040801-262]
47. CU571169.1 ENSDARG00000100253 575 1.53 - - - - - 0.715 - 0.815 -
48. phf23b ENSDARG00000036305 1073 1.507 - 0.780 - - - - - 0.727 - PHD finger protein 23b [Source:ZFIN;Acc:ZDB-GENE-030131-5895]
49. slc24a5 ENSDARG00000024771 107 1.439 - 0.718 - - - 0.721 - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 5 [Source:ZFIN;Acc:ZDB-GENE-031210-1]
50. si:dkeyp-106c3.1 ENSDARG00000090623 225 1 - 1.000 - - - - - - - si:dkeyp-106c3.1 [Source:ZFIN;Acc:ZDB-GENE-050411-73]
51. alp3 ENSDARG00000098063 0 1 - 1.000 - - - - - - - alkaline phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-120919-1]
52. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1 - 1.000 - - - - - - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
53. ZNF337_11 ZNF337_11 11 1 - 1.000 - - - - - - -
54. zgc:112994 ENSDARG00000026296 5 1 - 1.000 - - - - - - - zgc:112994 [Source:ZFIN;Acc:ZDB-GENE-050522-519]
55. fam5b fam5b 45 1 - 1.000 - - - - - - -
56. slc25a29 ENSDARG00000057352 9 1 - 1.000 - - - - - - - solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 [Source:ZFIN;Acc:ZDB-GENE-050913-70]
57. MLLT4 MLLT4 67 1 - 1.000 - - - - - - -
58. SRR_1 SRR_1 0 1 - 1.000 - - - - - - -
59. BX470131.1 BX470131.1 86 1 - 1.000 - - - - - - -
60. GABRA3 ENSDARG00000090883 5 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
61. abcc9 ENSDARG00000015985 20 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-23]
62. dmrt1 ENSDARG00000007349 16 1 - 1.000 - - - - - - - doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
63. CCDC18 ENSDARG00000078822 5 1 - - - - 1.000 - - - - coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
64. galr1 galr1 9 1 - 1.000 - - - - - - -
65. si:dkey-273e13.2 si:dkey-273e13.2 0 1 - 1.000 - - - - - - -
66. si:ch1073-143l10.2 ENSDARG00000094899 32 1 - 1.000 - - - - - - - si:ch1073-143l10.2 [Source:ZFIN;Acc:ZDB-GENE-030131-863]
67. nosip ENSDARG00000037958, ENSDARG00000112335 59 1 - 1.000 - - - - - - - nitric oxide synthase interacting protein [Source:ZFIN;Acc:ZDB-GENE-041114-146]
68. si:ch211-122l14.8 si:ch211-122l14.8 4 1 - 1.000 - - - - - - -
69. ZNF337_16 ZNF337_16 22 1 - 1.000 - - - - - - -
70. FAM117B FAM117B 225 1 - 1.000 - - - - - - -
71. zgc:165409_1 ENSDARG00000091385 65 1 - 1.000 - - - - - - - zgc:165409 [Source:ZFIN;Acc:ZDB-GENE-070615-19]
72. UHRF2_1 UHRF2_1 2 1 - 1.000 - - - - - - -
73. msgn1 ENSDARG00000070546 188 1 - 1.000 - - - - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
74. CABZ01079192.1 ENSDARG00000101629 23 1 - 1.000 - - - - - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
75. ERAP1 ERAP1 0 1 - 1.000 - - - - - - -
76. actl6b ENSDARG00000034107 9 1 - 1.000 - - - - - - - actin-like 6B [Source:ZFIN;Acc:ZDB-GENE-050522-191]
77. lcp2b ENSDARG00000036215 15 1 - 1.000 - - - - - - - lymphocyte cytosolic protein 2b [Source:ZFIN;Acc:ZDB-GENE-081107-21]
78. PRR12 PRR12 38 1 - 1.000 - - - - - - -
79. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1 - 1.000 - - - - - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
80. pycr1 pycr1 1258 1 - 1.000 - - - - - - -
81. BX537120.1 ENSDARG00000109968 0 1 - 1.000 - - - - - - -
82. cldnd ENSDARG00000006580 17 1 - 1.000 - - - - - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
83. ZNF135_2 ZNF135_2 27 1 - 1.000 - - - - - - -
84. pcbp3 ENSDARG00000054378 74 1 - 1.000 - - - - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
85. lhx5 ENSDARG00000057936 785 1 - 1.000 - - - - - - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
86. CIR1 ENSDARG00000099733 66 1 - 1.000 - - - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
87. si:dkey-71h2.2 ENSDARG00000043394 11 1 - 1.000 - - - - - - - si:dkey-71h2.2 [Source:ZFIN;Acc:ZDB-GENE-041014-145]
88. MFAP4_2 MFAP4_2 592 1 - 1.000 - - - - - - -
89. tfr1b ENSDARG00000077372, ENSDARG00000112880 24 1 - 1.000 - - - - - - - transferrin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-041220-2]
90. si:dkey-71b5.6 ENSDARG00000098861 12 1 - 1.000 - - - - - - - si:dkey-71b5.6 [Source:NCBI gene;Acc:100294632]
91. vip ENSDARG00000078247 10 1 - 1.000 - - - - - - - vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
92. rims1a ENSDARG00000074680 143 1 - 1.000 - - - - - - - regulating synaptic membrane exocytosis 1a [Source:ZFIN;Acc:ZDB-GENE-090312-135]
93. RAPGEF4 ENSDARG00000079872 82 1 - 1.000 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
94. si:dkey-100n10.2 101 1 - 1.000 - - - - - - - si:dkey-100n10.2
95. si:dkeyp-59a8.1 si:dkeyp-59a8.1 6 1 - 1.000 - - - - - - -
96. si:dkey-3n22.9 ENSDARG00000096273 1 1 - 1.000 - - - - - - - si:dkey-3n22.9 [Source:ZFIN;Acc:ZDB-GENE-120215-95]
97. cdh18 cdh18 64 1 - 1.000 - - - - - - -
98. atp2b2 ENSDARG00000044902, ENSDARG00000063433 140 1 - 1.000 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:ZFIN;Acc:ZDB-GENE-061016-1]
99. n6amt2 7 1 - 1.000 - - - - - - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
100. neu3.1 ENSDARG00000096382 9 1 - 1.000 - - - - - - - sialidase 3 (membrane sialidase), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061201-39]

There are 1366 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA