Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-278p9.1

Gene Name Gene ID Reads Annotation
si:ch211-278p9.1 ENSDARG00000087532 18 si:ch211-278p9.1 [Source:ZFIN;Acc:ZDB-GENE-081028-46]










Genes with expression patterns similar to si:ch211-278p9.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-278p9.1 ENSDARG00000087532 18 6 - 1.000 - 1.000 1.000 1.000 - 1.000 1.000 si:ch211-278p9.1 [Source:ZFIN;Acc:ZDB-GENE-081028-46]
2. paplnb ENSDARG00000042186 18 2.675 - - - 1.000 - - - 0.930 0.745 papilin b, proteoglycan-like sulfated glycoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-6023]
3. CALN1 ENSDARG00000088898 114 2.638 - 0.703 - - 0.935 1.000 - - - calneuron 1 [Source:ZFIN;Acc:ZDB-GENE-130313-1]
4. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 2 - - - 1.000 - 1.000 - - - solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
5. zgc:66024 ENSDARG00000068840, ENSDARG00000068846 37 2 - 1.000 - - - 1.000 - - - zgc:66024 [Source:ZFIN;Acc:ZDB-GENE-040426-1511]
6. si:dkey-114b16.4 si:dkey-114b16.4 35 1.91 - - - - - 1.000 - 0.910 -
7. mapk9 ENSDARG00000077364 38 1.878 - 0.939 - - - - - - 0.939 mitogen-activated protein kinase 9 [Source:ZFIN;Acc:ZDB-GENE-091117-28]
8. epb41l3b ENSDARG00000019917 9 1.846 - 0.846 - - - 1.000 - - - erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
9. si:dkeyp-80d11.4 ENSDARG00000103254 13 1.843 - 0.843 - - - 1.000 - - - si:dkeyp-80d11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-184]
10. hsh2d ENSDARG00000042908, ENSDARG00000110717 91 1.83 - 0.830 - - - 1.000 - - - hematopoietic SH2 domain containing [Source:ZFIN;Acc:ZDB-GENE-050410-3]
11. OMA1 ENSDARG00000090503 19 1.818 - 0.818 - - - 1.000 - - - OMA1 zinc metallopeptidase [Source:ZFIN;Acc:ZDB-GENE-091204-124]
12. neu3.3 ENSDARG00000058327, ENSDARG00000114607 23 1.796 - 0.979 - - - - - 0.817 - sialidase 3 (membrane sialidase), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-061103-511]
13. TRPM4 TRPM4 60 1.772 - 0.913 - - 0.859 - - - -
14. si:dkey-24i24.3 ENSDARG00000088452 27 1.755 - - - - - 1.000 - 0.755 - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
15. ntf7 ntf7 72 1.749 - 0.978 - - - - - 0.771 -
16. si:dkey-85k15.4 ENSDARG00000095047 25 1.732 - - - - 0.997 - - 0.735 - si:dkey-85k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-242]
17. ptprja ENSDARG00000033042 25 1.689 - 0.981 - - - 0.708 - - - protein tyrosine phosphatase, receptor type, J a [Source:ZFIN;Acc:ZDB-GENE-030131-8301]
18. dre-mir-429b ENSDARG00000082968 212 1.663 - 0.958 - - - - - 0.705 - dre-mir-429b [Source:miRBase;Acc:MI0010836]
19. WNT7A WNT7A 320 1.646 - - - - 0.857 - - 0.789 -
20. pacrg ENSDARG00000087556 25 1.628 - - - - - - - 0.901 0.727 PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
21. zgc:103438 ENSDARG00000035663 46 1.625 - 0.848 - - - - - 0.777 - zgc:103438 [Source:ZFIN;Acc:ZDB-GENE-041010-131]
22. tceanc2 ENSDARG00000062919 32 1.61 - - - - - - - 0.752 0.858 transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
23. PRRT3 PRRT3 195 1.609 - 0.856 - - 0.753 - - - -
24. F2RL3 ENSDARG00000079399 29 1.57 - 0.849 - 0.721 - - - - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
25. GAS2L1 ENSDARG00000078803 315 1.541 - 0.795 - - 0.746 - - - - growth arrest-specific 2 like 1 [Source:ZFIN;Acc:ZDB-GENE-070705-38]
26. b3gnt5a ENSDARG00000018971 938 1.505 - 0.731 - - 0.774 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-030131-8470]
27. SNORA73_1 SNORA73_1 85 1.471 - 0.745 - - - - - 0.726 -
28. si:dkey-3d4.3 ENSDARG00000074079 365 1.464 - - - - 0.732 - - 0.732 - si:dkey-3d4.3 [Source:ZFIN;Acc:ZDB-GENE-070912-527]
29. dtwd1 ENSDARG00000111509 347 1.426 - - - - - 0.711 - 0.715 - DTW domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041010-23]
30. pgls ENSDARG00000021233 264 1.418 - - - - 0.705 0.713 - - - 6-phosphogluconolactonase [Source:ZFIN;Acc:ZDB-GENE-040822-9]
31. ggcta ENSDARG00000076406 33 1 - - - - - 1.000 - - - gamma-glutamylcyclotransferase a [Source:ZFIN;Acc:ZDB-GENE-081104-129]
32. si:dkey-8o9.6 si:dkey-8o9.6 0 1 - - - - - 1.000 - - -
33. col5a3b ENSDARG00000101816 56 1 - - - - - 1.000 - - - collagen, type V, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-110728-4]
34. si:dkeyp-13d11.2 79 1 - - - - - 1.000 - - - si:dkeyp-13d11.2
35. adamts13 ENSDARG00000076270 8 1 - - - - - - - - 1.000 ADAM metallopeptidase with thrombospondin type 1 motif, 13 [Source:ZFIN;Acc:ZDB-GENE-070814-7]
36. U6_12 U6_12 0 1 - - - - - 1.000 - - -
37. col7a1l ENSDARG00000069692 44 1 - - - - - 1.000 - - - collagen type VII alpha 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9861]
38. tmem168b ENSDARG00000062168 17 1 - - - - - 1.000 - - - transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
39. RP1 ENSDARG00000077687 6 1 - - - - - 1.000 - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
40. mcm3l ENSDARG00000037532, ENSDARG00000110461 7 1 - - - - - 1.000 - - - MCM3 minichromosome maintenance deficient 3 (S. cerevisiae), like [Source:ZFIN;Acc:ZDB-GENE-040121-2]
41. nedd9 ENSDARG00000089878, ENSDARG00000116312 41 1 - - - - - 1.000 - - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
42. si:dkey-93m18.5 si:dkey-93m18.5 2 1 - - - - - 1.000 - - -
43. fgf11b ENSDARG00000043907 16 1 - 1.000 - - - - - - - fibroblast growth factor 11b [Source:ZFIN;Acc:ZDB-GENE-100316-2]
44. BX537113.1_1 BX537113.1_1 3 1 - - - - - 1.000 - - -
45. p2rx1 ENSDARG00000016695, ENSDARG00000110431 9 1 - - - - - 1.000 - - - purinergic receptor P2X, ligand-gated ion channel, 1 [Source:ZFIN;Acc:ZDB-GENE-030319-1]
46. GRM5 GRM5 4 1 - 1.000 - - - - - - -
47. pou6f2 ENSDARG00000086362 135 1 - 1.000 - - - - - - - POU class 6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-091118-71]
48. KBTBD3 ENSDARG00000060512 42 1 - - - - - 1.000 - - - kelch repeat and BTB (POZ) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-131016-5]
49. zgc:136872 ENSDARG00000008553 9 1 - 1.000 - - - - - - - zgc:136872 [Source:ZFIN;Acc:ZDB-GENE-060421-5204]
50. pias4b ENSDARG00000042215 12 1 - - - 1.000 - - - - - protein inhibitor of activated STAT, 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1298]
51. si:ch211-117i10.10 si:ch211-117i10.10 18 1 - - - - - 1.000 - - -
52. BX465203.1 ENSDARG00000113985 8 1 - - - - - 1.000 - - -
53. paqr8 ENSDARG00000088828 4 1 - - - - - - - - 1.000 progestin and adipoQ receptor family member VIII [Source:ZFIN;Acc:ZDB-GENE-030728-3]
54. MEX3D MEX3D 293 1 - - - - - 1.000 - - -
55. si:ch211-57m13.9 ENSDARG00000095884 10 1 - - - - - - - - 1.000 si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]
56. si:ch211-59h6.1 ENSDARG00000013022 193 1 - - - - - 1.000 - - - si:ch211-59h6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-418]
57. si:ch211-126g16.8 3 1 - - - - - 1.000 - - - si:ch211-126g16.8, transcript variant X1
58. otx5 ENSDARG00000043483 282 1 - - - - - 1.000 - - - orthodenticle homolog 5 [Source:ZFIN;Acc:ZDB-GENE-030508-1]
59. PLEKHS1_1 PLEKHS1_1 23 1 - - - - - 1.000 - - -
60. si:dkey-117n7.2 ENSDARG00000093135 40 1 - - - - - 1.000 - - - si:dkey-117n7.2 [Source:ZFIN;Acc:ZDB-GENE-060503-49]
61. PLCG2 ENSDARG00000068763 11 1 - 1.000 - - - - - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
62. rxfp3.3a3 ENSDARG00000069246 5 1 - 1.000 - - - - - - - relaxin family peptide receptor 3.3a3 [Source:ZFIN;Acc:ZDB-GENE-050419-246]
63. GMNC ENSDARG00000068719 28 1 - - - - - 1.000 - - - geminin coiled-coil domain containing [Source:ZFIN;Acc:ZDB-GENE-121211-1]
64. sema6e ENSDARG00000000189 35 1 - - - - - 1.000 - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E [Source:ZFIN;Acc:ZDB-GENE-040724-119]
65. syne3 ENSDARG00000023237 23 1 - - - - - 1.000 - - - spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
66. si:zfos-1762d12.1 si:zfos-1762d12.1 5 1 - 1.000 - - - - - - -
67. pmvk ENSDARG00000070798, ENSDARG00000109348 76 1 - - - - - 1.000 - - - phosphomevalonate kinase [Source:ZFIN;Acc:ZDB-GENE-070410-91]
68. si:dkey-121j17.5 ENSDARG00000014232 18 1 - - - - - - - - 1.000 si:dkey-121j17.5 [Source:ZFIN;Acc:ZDB-GENE-030131-4745]
69. CABZ01075947.1 CABZ01075947.1 2 1 - - - - - - - - 1.000
70. tagapa ENSDARG00000002353 20 1 - - - - - 1.000 - - - T cell activation RhoGTPase activating protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1877]
71. STPG2 ENSDARG00000061060 16 1 - - - - - 1.000 - - - sperm-tail PG-rich repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-061013-667]
72. nfil3-4 ENSDARG00000092346 3 1 - - - - - 1.000 - - - nuclear factor, interleukin 3 regulated, member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-214]
73. si:dkeyp-34a4.1 si:dkeyp-34a4.1 0 1 - - - - - 1.000 - - -
74. drl ENSDARG00000078004 43 1 - - - - - 1.000 - - - draculin [Source:ZFIN;Acc:ZDB-GENE-991213-3]
75. si:dkey-285e18.3 si:dkey-285e18.3 10 1 - - - - - 1.000 - - -
76. si:dkeyp-4f2.6 ENSDARG00000095596 3 1 - - - - - 1.000 - - - si:dkeyp-4f2.6 [Source:ZFIN;Acc:ZDB-GENE-110914-212]
77. BX000477.1 BX000477.1 1 1 - - - - - 1.000 - - -
78. nrg2b ENSDARG00000086585 100 1 - 1.000 - - - - - - - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
79. CU182107.2 ENSDARG00000112862 2 1 - - - - - - - - 1.000
80. cux2b ENSDARG00000086345 519 1 - 1.000 - - - - - - - cut-like homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-081104-176]
81. zgc:152891 ENSDARG00000016789 11 1 - 1.000 - - - - - - - zgc:152891 [Source:ZFIN;Acc:ZDB-GENE-061013-229]
82. tmem123 ENSDARG00000095674 66 1 - 1.000 - - - - - - - transmembrane protein 123 [Source:ZFIN;Acc:ZDB-GENE-050419-69]
83. BX323796.1 BX323796.1 2 1 - - - - - 1.000 - - -
84. abo ENSDARG00000019207 16 1 - 1.000 - - - - - - - ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-081104-23]
85. rab11fip5a ENSDARG00000104179 5 1 - 1.000 - - - - - - - RAB11 family interacting protein 5a (class I) [Source:ZFIN;Acc:ZDB-GENE-090313-206]
86. HPX ENSDARG00000012609 781 1 - - - - - 1.000 - - - hemopexin [Source:ZFIN;Acc:ZDB-GENE-030131-5773]
87. CABZ01074946.1 CABZ01074946.1 119 1 - - - - - 1.000 - - -
88. si:dkey-220o21.5 si:dkey-220o21.5 24 1 - - - - - 1.000 - - -
89. PAQR8 ENSDARG00000088828 26 1 - 1.000 - - - - - - - progestin and adipoQ receptor family member VIII [Source:ZFIN;Acc:ZDB-GENE-030728-3]
90. 5S_rRNA_14 5S_rRNA_14 0 1 - - - 1.000 - - - - -
91. aqp9b ENSDARG00000053480 16 1 - - - - - 1.000 - - - aquaporin 9b [Source:ZFIN;Acc:ZDB-GENE-070911-1]
92. GPR116_3 GPR116_3 9 1 - - - 1.000 - - - - -
93. si:dkey-88j15.4 ENSDARG00000079471 3 1 - - - - - 1.000 - - - si:dkey-88j15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-55]
94. si:ch211-254p10.3 si:ch211-254p10.3 5 1 - - - - - 1.000 - - -
95. zymnd12 17 1 - - - - - 1.000 - - - zinc finger, MYND-type containing 12, transcript variant X1
96. sytl5 ENSDARG00000062135 11 1 - - - - - 1.000 - - - synaptotagmin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070912-424]
97. tpbgl ENSDARG00000114338 5 1 - - - - - 1.000 - - - trophoblast glycoprotein-like [Source:ZFIN;Acc:ZDB-GENE-120209-2]
98. si:ch73-132k15.2 ENSDARG00000095867 5 1 - - - 1.000 - - - - - si:ch73-132k15.2 [Source:ZFIN;Acc:ZDB-GENE-110411-191]
99. Metazoa_SRP_27 Metazoa_SRP_27 2 1 - - - - - - - - 1.000
100. foxg1c ENSDARG00000068380, ENSDARG00000114414 25 1 - 1.000 - - - - - - - forkhead box G1c [Source:ZFIN;Acc:ZDB-GENE-050419-26]

There are 1038 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA