Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-274k16.4

Gene Name Gene ID Reads Annotation
si:ch211-274k16.4 si:ch211-274k16.4 6










Genes with expression patterns similar to si:ch211-274k16.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-274k16.4 si:ch211-274k16.4 6 7 1.000 1.000 1.000 1.000 1.000 - - 1.000 1.000
2. AC024175.11 AC024175.11 12 2 1.000 - - 1.000 - - - - -
3. si:dkey-206f10.5 si:dkey-206f10.5 1 2 1.000 - - 1.000 - - - - -
4. ASPG_1 ASPG_1 2 2 - - 1.000 1.000 - - - - -
5. si:dkey-196n19.5 si:dkey-196n19.5 6 1.945 - - 1.000 - - - - - 0.945
6. si:ch211-224b1.4 si:ch211-224b1.4 29 1.917 0.917 1.000 - - - - - - -
7. NRG3 NRG3 22 1.917 0.917 - 1.000 - - - - - -
8. si:ch1073-162e11.2 si:ch1073-162e11.2 5 1.898 1.000 0.898 - - - - - - -
9. chd3 ENSDARG00000021405, ENSDARG00000115235 17 1.894 1.000 0.894 - - - - - - - chromodomain helicase DNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-121031-4]
10. BX664622.3 BX664622.3 42 1.893 0.893 1.000 - - - - - - -
11. si:ch211-232m19.4 19 1.868 - - - 1.000 0.868 - - - - si:ch211-232m19.4
12. KBTBD3 ENSDARG00000060512 42 1.806 0.806 1.000 - - - - - - - kelch repeat and BTB (POZ) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-131016-5]
13. entpd2a.1 ENSDARG00000035506 14 1.789 - - 0.789 1.000 - - - - - ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040724-187]
14. si:dkey-8o9.5 si:dkey-8o9.5 6 1.782 - 0.822 - 0.960 - - - - -
15. CT030712.1 ENSDARG00000044355 83 1.778 - 0.910 - - - - - 0.868 - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
16. si:dkey-93h22.6 si:dkey-93h22.6 7 1.775 - - - - 0.830 - - - 0.945
17. cox5aa ENSDARG00000088383 21 1.757 1.000 - 0.757 - - - - - - cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
18. KCNB2 ENSDARG00000088842 35 1.746 0.805 - 0.941 - - - - - - potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
19. ABCC6 ABCC6 5 1.732 - - 1.000 - - - - - 0.732
20. grk1a ENSDARG00000058803 13 1.728 - 1.000 - - - - - - 0.728 G protein-coupled receptor kinase 1 a [Source:ZFIN;Acc:ZDB-GENE-050823-1]
21. chmp6b ENSDARG00000102024 37 1.704 0.937 0.767 - - - - - - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
22. si:busm1-163l24.3 31 1.704 1.000 0.704 - - - - - - - si:busm1-163l24.3
23. TDRD7B ENSDARG00000077523 124 1.7 0.790 0.910 - - - - - - - tudor domain containing 7 b [Source:ZFIN;Acc:ZDB-GENE-150109-14]
24. tp53i11a ENSDARG00000069430 65 1.64 0.810 - 0.830 - - - - - - tumor protein p53 inducible protein 11a [Source:ZFIN;Acc:ZDB-GENE-050306-58]
25. TRIM14_2 TRIM14_2 15 1.612 - - 0.834 - - - - 0.778 -
26. si:dkeyp-110e4.11 ENSDARG00000071585 148 1.602 - 0.808 0.794 - - - - - - si:dkeyp-110e4.11 [Source:ZFIN;Acc:ZDB-GENE-070424-267]
27. znf395 znf395 60 1.568 0.724 0.844 - - - - - - -
28. gfpt1 ENSDARG00000057465 14 1.562 - - 0.833 - - - - - 0.729 glutamine--fructose-6-phosphate transaminase 1 [Source:ZFIN;Acc:ZDB-GENE-070423-1]
29. rftn1a ENSDARG00000070831 5 1.562 - - - 0.714 - - - - 0.848 raftlin, lipid raft linker 1a [Source:ZFIN;Acc:ZDB-GENE-060503-293]
30. FP017279.3 FP017279.3 31 1.49 - 0.707 - - - - - - 0.783
31. si:ch211-274p24.3 si:ch211-274p24.3 72 1.489 - - - 0.757 0.732 - - - -
32. PACRG ENSDARG00000087556 7 1 - - - 1.000 - - - - - PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
33. CU207245.2 ENSDARG00000113016 1 1 - - - - 1.000 - - - -
34. PIK3CA ENSDARG00000075456 39 1 1.000 - - - - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha [Source:ZFIN;Acc:ZDB-GENE-130409-1]
35. cyp4f3 ENSDARG00000053530 10 1 - 1.000 - - - - - - - cytochrome P450, family 4, subfamily F, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070410-108]
36. mgp ENSDARG00000086189 9 1 - - 1.000 - - - - - - matrix Gla protein [Source:ZFIN;Acc:ZDB-GENE-060928-1]
37. CKMT2 CKMT2 10 1 - 1.000 - - - - - - -
38. CU896691.3 ENSDARG00000109630 1 1 1.000 - - - - - - - -
39. si:dkey-77p23.2 si:dkey-77p23.2 22 1 - 1.000 - - - - - - -
40. si:dkey-88e10.2 si:dkey-88e10.2 7 1 - - - - - - - 1.000 -
41. hip1r hip1r 10 1 - - - - 1.000 - - - -
42. zgc:171445 ENSDARG00000115205 3 1 - - - - 1.000 - - - - zgc:171445 [Source:ZFIN;Acc:ZDB-GENE-080205-2]
43. si:dkey-54f18.2 si:dkey-54f18.2 27 1 - 1.000 - - - - - - -
44. TNRC6C TNRC6C 5 1 - - - - 1.000 - - - -
45. mpg ENSDARG00000069729 43 1 - 1.000 - - - - - - - N-methylpurine DNA glycosylase [Source:ZFIN;Acc:ZDB-GENE-070410-121]
46. pnx ENSDARG00000025899 25 1 1.000 - - - - - - - - posterior neuron-specific homeobox [Source:ZFIN;Acc:ZDB-GENE-030328-42]
47. si:dkey-14o18.1 si:dkey-14o18.1 108 1 - - - 1.000 - - - - -
48. C11H3orf83 C11H3orf83 30 1 - 1.000 - - - - - - -
49. ATP13A5 ATP13A5 13 1 1.000 - - - - - - - -
50. med8 ENSDARG00000114425 7 1 - - - 1.000 - - - - - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
51. l3mbtl1a ENSDARG00000014828 119 1 - - - - 1.000 - - - - l(3)mbt-like 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090312-120]
52. zgc:112234_7 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 1 1 - - - - - - - 1.000 - zgc:112234 [Source:NCBI gene;Acc:554097]
53. RECK ENSDARG00000090039 15 1 1.000 - - - - - - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
54. bdkrb1 ENSDARG00000020744 4 1 - - 1.000 - - - - - - bradykinin receptor B1 [Source:ZFIN;Acc:ZDB-GENE-030814-1]
55. ENSDARG00000090967 ENSDARG00000090967 0 1 - - - - 1.000 - - - -
56. srd5a2b ENSDARG00000039067 4 1 - - - - 1.000 - - - - steroid-5-alpha-reductase, alpha polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-050417-182]
57. SYNGAP1_1 SYNGAP1_1 66 1 - 1.000 - - - - - - -
58. si:dkey-7f3.14 ENSDARG00000095050 18 1 - - 1.000 - - - - - - si:dkey-7f3.14 [Source:ZFIN;Acc:ZDB-GENE-100922-186]
59. si:dkey-208a9.1 si:dkey-208a9.1 3 1 - 1.000 - - - - - - -
60. CT025771.1 ENSDARG00000117721 13 1 - - - 1.000 - - - - -
61. taf4b ENSDARG00000075732 3 1 - 1.000 - - - - - - - TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-070424-105]
62. MAD2L2 ENSDARG00000042456 0 1 - - - 1.000 - - - - - mitotic arrest deficient 2 like 2 [Source:ZFIN;Acc:ZDB-GENE-050417-61]
63. Metazoa_SRP Metazoa_SRP 1 1 - 1.000 - - - - - - -
64. CR762436.3 CR762436.3 1 1 - - - - 1.000 - - - -
65. si:ch211-250n8.1 ENSDARG00000088736 4 1 - - - - 1.000 - - - - si:ch211-250n8.1 [Source:ZFIN;Acc:ZDB-GENE-130603-2]
66. lhcgr ENSDARG00000026081 2 1 - - 1.000 - - - - - - luteinizing hormone/choriogonadotropin receptor [Source:ZFIN;Acc:ZDB-GENE-040806-3]
67. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - - - 1.000 - - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
68. C1QTNF6 C1QTNF6 2 1 - - - - 1.000 - - - -
69. pxn pxn 10 1 - - 1.000 - - - - - -
70. CABZ01030429.1 CABZ01030429.1 1 1 1.000 - - - - - - - -
71. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 1 - 1.000 - - - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
72. FP016207.1 FP016207.1 3 1 - - - - 1.000 - - - -
73. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1 - 1.000 - - - - - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
74. CR774179.2 ENSDARG00000102385 3 1 - - 1.000 - - - - - -
75. angptl1 angptl1 82 1 1.000 - - - - - - - -
76. si:ch211-182e10.4 ENSDARG00000070661, ENSDARG00000070757 1 1 - - - 1.000 - - - - - si:ch211-182e10.4 [Source:ZFIN;Acc:ZDB-GENE-041014-76]
77. cers3b ENSDARG00000036337 1 1 - - - 1.000 - - - - - ceramide synthase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-32]
78. baxa_1 ENSDARG00000020623, ENSDARG00000089129 9 1 - 1.000 - - - - - - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
79. si:dkey-187i8.2 ENSDARG00000096624 8 1 1.000 - - - - - - - - si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
80. CABZ01084273.1 CABZ01084273.1 16 1 - - - 1.000 - - - - -
81. NWD1 ENSDARG00000076110 3 1 - - - 1.000 - - - - - NACHT and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071116-8]
82. KLHDC8A ENSDARG00000061000 13 1 - - - 1.000 - - - - - kelch domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-120810-3]
83. PEG3_25 PEG3_25 0 1 - - - - - - - 1.000 -
84. angptl2a ENSDARG00000024030 8 1 - 1.000 - - - - - - - angiopoietin-like 2a [Source:ZFIN;Acc:ZDB-GENE-080721-15]
85. zgc:77880 ENSDARG00000030563 208 1 - 1.000 - - - - - - - zgc:77880 [Source:ZFIN;Acc:ZDB-GENE-040426-1901]
86. CU459094.2 ENSDARG00000113503 5 1 - - 1.000 - - - - - - uncharacterized LOC100331538 [Source:NCBI gene;Acc:100331538]
87. si:ch211-147m20.1 si:ch211-147m20.1 6 1 - - - - - - - 1.000 -
88. BX324198.1 BX324198.1 12 1 - - - 1.000 - - - - -
89. lamb1a_1 ENSDARG00000101209 13 1 - - - - 1.000 - - - - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
90. CCDC106_1 CCDC106_1 1 1 1.000 - - - - - - - -
91. wu:fy63c09 1 1 - - - - 1.000 - - - - wu:fy63c09
92. fam57bb ENSDARG00000074564 2 1 - - 1.000 - - - - - - family with sequence similarity 57, member Bb [Source:ZFIN;Acc:ZDB-GENE-110603-2]
93. BX511066.4 BX511066.4 6 1 1.000 - - - - - - - -
94. CR933820.2 CR933820.2 152 1 - - 1.000 - - - - - -
95. urgcp ENSDARG00000036767 6 1 - - - 1.000 - - - - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
96. si:dkey-61m24.1 0 1 - - - 1.000 - - - - - si:dkey-61m24.1
97. GPC6_1 GPC6_1 34 1 1.000 - - - - - - - -
98. rpgrip1l ENSDARG00000051754 2 1 - - - 1.000 - - - - - RPGRIP1-like [Source:ZFIN;Acc:ZDB-GENE-081104-81]
99. hbaa2 ENSDARG00000069735 10 1 1.000 - - - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
100. camk1ga ENSDARG00000044526 5 1 - - 1.000 - - - - - - calcium/calmodulin-dependent protein kinase IGa [Source:ZFIN;Acc:ZDB-GENE-030131-7594]

There are 906 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA