Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-270n8.3

Gene Name Gene ID Reads Annotation
si:ch211-270n8.3 87 si:ch211-270n8.3, transcript variant X2










Genes with expression patterns similar to si:ch211-270n8.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-270n8.3 87 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-270n8.3, transcript variant X2
2. cldn15la ENSDARG00000016081 197 2.392 - 0.781 - - - 0.751 0.860 - - claudin 15-like a [Source:ZFIN;Acc:ZDB-GENE-010328-12]
3. efnb2b ENSDARG00000074050 77 1.828 0.993 - - - - - 0.835 - - ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
4. rbl1 ENSDARG00000008141 1217 1.755 0.952 - - - - - 0.803 - - retinoblastoma-like 1 (p107) [Source:ZFIN;Acc:ZDB-GENE-030131-8179]
5. BX682552.2_1 BX682552.2_1 37 1.731 - - - - - - 0.889 0.842 -
6. slc3a1 ENSDARG00000017165 136 1.722 - 0.825 - - - - 0.897 - - solute carrier family 3 (amino acid transporter heavy chain), member 1 [Source:ZFIN;Acc:ZDB-GENE-090313-225]
7. psme1 ENSDARG00000002165, ENSDARG00000115834 72 1.711 1.000 - - - - 0.711 - - - proteasome activator subunit 1 [Source:ZFIN;Acc:ZDB-GENE-991110-17]
8. actr5 ENSDARG00000098235 237 1.705 0.999 0.706 - - - - - - - ARP5 actin related protein 5 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2877]
9. si:dkey-238o13.4 ENSDARG00000078847 884 1.701 0.971 - - - - - 0.730 - - si:dkey-238o13.4 [Source:ZFIN;Acc:ZDB-GENE-070705-403]
10. her15.2 her15.2 1701 1.695 0.849 0.846 - - - - - - -
11. cby1 ENSDARG00000077409, ENSDARG00000113018 772 1.689 0.985 - - - - - 0.704 - - chibby homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5074]
12. snx18b ENSDARG00000044246, ENSDARG00000110012 51 1.683 - 0.846 - - - - 0.837 - - sorting nexin 18b [Source:ZFIN;Acc:ZDB-GENE-080213-6]
13. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 1.657 0.804 0.853 - - - - - - - rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
14. TEKT4 ENSDARG00000028899 47 1.654 - - - - - 0.788 0.866 - - tektin 4 [Source:ZFIN;Acc:ZDB-GENE-070410-98]
15. DNAI1 DNAI1 11 1.653 - - - - - - 0.859 0.794 -
16. si:dkey-196n19.5 si:dkey-196n19.5 6 1.645 - - - - 0.786 - 0.859 - -
17. si:ch211-270n8.4 87 1.644 - - - - - 0.806 0.838 - - si:ch211-270n8.4
18. CDHR2_1 CDHR2_1 12 1.637 - 0.778 - - - - 0.859 - -
19. ttll6 ENSDARG00000054023, ENSDARG00000109623 147 1.624 - 0.812 - - - - 0.812 - - tubulin tyrosine ligase-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080107-1]
20. bpnt1 ENSDARG00000043684 78 1.614 - - - - - - 0.909 0.705 - bisphosphate nucleotidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-46]
21. wdr19 ENSDARG00000037406 98 1.602 - 0.820 - - - - 0.782 - - WD repeat domain 19 [Source:ZFIN;Acc:ZDB-GENE-090313-277]
22. CCDC84 ENSDARG00000059606 65 1.599 - 0.887 - - - 0.712 - - - coiled-coil domain containing 84 [Source:ZFIN;Acc:ZDB-GENE-060929-1174]
23. gpr126 gpr126 51 1.589 - - - - - 0.713 0.876 - -
24. cpeb1a ENSDARG00000045932 81 1.584 - 0.776 - - - - 0.808 - - cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
25. mvd mvd 105 1.58 - 0.853 - - - - - 0.727 -
26. ints2 ENSDARG00000069085, ENSDARG00000101876 1249 1.57 - 0.781 - - - - 0.789 - - integrator complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-148]
27. aqp8b_1 ENSDARG00000089749 586 1.56 - 0.854 - - - - 0.706 - - aquaporin 8b [Source:ZFIN;Acc:ZDB-GENE-080220-47]
28. slc2a1a ENSDARG00000001437, ENSDARG00000116129 1614 1.527 - 0.824 - - - - 0.703 - - solute carrier family 2 (facilitated glucose transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3158]
29. coro6 ENSDARG00000102272 76 1.523 - 0.808 - - - - 0.715 - - coronin 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1202]
30. rasal3 ENSDARG00000089933 17 1.522 - - - - - 0.749 0.773 - - RAS protein activator like 3 [Source:ZFIN;Acc:ZDB-GENE-101130-3]
31. ccdc104 ccdc104 248 1.518 - - - - - 0.709 0.809 - -
32. dnaaf2 ENSDARG00000103132 24 1.518 - - - - - 0.710 0.808 - - dynein, axonemal, assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050809-128]
33. ccdc103 ENSDARG00000053455 81 1.516 - - - - - 0.791 0.725 - - coiled-coil domain containing 103 [Source:ZFIN;Acc:ZDB-GENE-040718-253]
34. CPNE8_1 CPNE8_1 140 1.505 - 0.800 - - - - 0.705 - -
35. slc26a6 ENSDARG00000055835, ENSDARG00000097292 66 1.502 - 0.759 - - - 0.743 - - - solute carrier family 26, member 6 [Source:ZFIN;Acc:ZDB-GENE-081105-83]
36. CABZ01054965.1 ENSDARG00000090844 74 1.478 - 0.745 - - 0.733 - - - - interleukin-1 receptor type 1-like [Source:NCBI gene;Acc:799279]
37. BX890577.1 BX890577.1 257 1.46 - - - - - 0.729 0.731 - -
38. mcat ENSDARG00000016613, ENSDARG00000096473 140 1.459 - 0.705 - - - - 0.754 - - malonyl CoA:ACP acyltransferase (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-041111-231]
39. PTPDC1 PTPDC1 30 1 1.000 - - - - - - - -
40. si:ch211-157l15.4 si:ch211-157l15.4 92 1 1.000 - - - - - - - -
41. si:dkeyp-99c4.4 si:dkeyp-99c4.4 31 1 1.000 - - - - - - - -
42. ugt5b4 ENSDARG00000091916 130 1 1.000 - - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-070112-2332]
43. pycr1 pycr1 1258 0.999 0.999 - - - - - - - -
44. fam155a ENSDARG00000075858 91 0.999 0.999 - - - - - - - - family with sequence similarity 155, member A [Source:ZFIN;Acc:ZDB-GENE-090313-34]
45. trim25l ENSDARG00000020863 292 0.999 0.999 - - - - - - - - tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
46. shdb ENSDARG00000062109, ENSDARG00000111006 323 0.999 0.999 - - - - - - - - Src homology 2 domain containing transforming protein D, b [Source:ZFIN;Acc:ZDB-GENE-030131-6059]
47. gdap1l1 ENSDARG00000028628 233 0.999 0.999 - - - - - - - - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
48. C2H7orf25 C2H7orf25 209 0.998 0.998 - - - - - - - -
49. arhgap19 ENSDARG00000083189 210 0.998 0.998 - - - - - - - - Rho GTPase activating protein 19 [Source:ZFIN;Acc:ZDB-GENE-100922-157]
50. ACOT12 ENSDARG00000054534 61 0.998 0.998 - - - - - - - - acyl-CoA thioesterase 12 [Source:HGNC Symbol;Acc:HGNC:24436]
51. vps11 ENSDARG00000036338 421 0.996 0.996 - - - - - - - - vacuolar protein sorting 11 [Source:ZFIN;Acc:ZDB-GENE-050731-5]
52. rhogb ENSDARG00000004301 358 0.995 0.995 - - - - - - - - ras homolog family member Gb [Source:ZFIN;Acc:ZDB-GENE-030131-8877]
53. lzic ENSDARG00000055899 638 0.994 0.994 - - - - - - - - leucine zipper and CTNNBIP1 domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-342]
54. bub1 ENSDARG00000077029 634 0.994 0.994 - - - - - - - - BUB1 mitotic checkpoint serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-081104-75]
55. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 0.994 0.994 - - - - - - - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
56. ing5a ENSDARG00000022413 268 0.994 0.994 - - - - - - - - inhibitor of growth family, member 5a [Source:ZFIN;Acc:ZDB-GENE-031016-1]
57. ptpn21 ENSDARG00000062248 2010 0.993 0.993 - - - - - - - - protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
58. plk2b ENSDARG00000019130, ENSDARG00000111402 328 0.992 0.992 - - - - - - - - polo-like kinase 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070720-17]
59. si:ch211-264e16.1 ENSDARG00000068947 1358 0.991 0.991 - - - - - - - - si:ch211-264e16.1 [Source:ZFIN;Acc:ZDB-GENE-060503-226]
60. si:ch211-254c8.2 233 0.991 0.991 - - - - - - - - si:ch211-254c8.2, transcript variant X4
61. cib1 ENSDARG00000103118 291 0.991 0.991 - - - - - - - - calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
62. prickle1a ENSDARG00000040649 700 0.99 0.990 - - - - - - - - prickle homolog 1a [Source:ZFIN;Acc:ZDB-GENE-030724-5]
63. EPS8L2 ENSDARG00000058108 484 0.99 0.990 - - - - - - - - EPS8 like 2 [Source:ZFIN;Acc:ZDB-GENE-131121-340]
64. BICD2 ENSDARG00000075571 401 0.99 0.990 - - - - - - - - bicaudal D homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-120717-1]
65. wdr35 ENSDARG00000069269 492 0.99 0.990 - - - - - - - - WD repeat domain 35 [Source:ZFIN;Acc:ZDB-GENE-060810-148]
66. swt1 ENSDARG00000094010 472 0.989 0.989 - - - - - - - - SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
67. bcl3 ENSDARG00000087832 69 0.989 0.989 - - - - - - - - B cell CLL/lymphoma 3 [Source:ZFIN;Acc:ZDB-GENE-061013-1]
68. prss35 ENSDARG00000100691, ENSDARG00000109353 2333 0.988 0.988 - - - - - - - - protease, serine, 35 [Source:ZFIN;Acc:ZDB-GENE-040704-55]
69. wnt10a ENSDARG00000017155 491 0.987 0.987 - - - - - - - - wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
70. si:ch1073-322p19.1 ENSDARG00000075173 204 0.987 0.987 - - - - - - - - si:ch1073-322p19.1 [Source:ZFIN;Acc:ZDB-GENE-091204-224]
71. miox ENSDARG00000002764 588 0.987 0.987 - - - - - - - - myo-inositol oxygenase [Source:ZFIN;Acc:ZDB-GENE-050913-113]
72. CARKD 1398 0.987 0.987 - - - - - - - - carbohydrate kinase domain containing, transcript variant X7
73. zgc:92313 ENSDARG00000040513 790 0.987 0.987 - - - - - - - - zgc:92313 [Source:ZFIN;Acc:ZDB-GENE-040718-339]
74. sox4a ENSDARG00000004588, ENSDARG00000096389 2213 0.987 0.987 - - - - - - - - SRY (sex determining region Y)-box 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8290]
75. osgn1 ENSDARG00000052279 5607 0.986 0.986 - - - - - - - - oxidative stress induced growth inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-864]
76. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 0.985 0.985 - - - - - - - - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
77. kif1b ENSDARG00000037020 2124 0.985 0.985 - - - - - - - - kinesin family member 1B [Source:ZFIN;Acc:ZDB-GENE-030820-1]
78. rhov ENSDARG00000070434 808 0.985 0.985 - - - - - - - - ras homolog family member V [Source:ZFIN;Acc:ZDB-GENE-031002-10]
79. ssfa2 340 0.984 0.984 - - - - - - - - sperm specific antigen 2, transcript variant X2
80. gla ENSDARG00000036155, ENSDARG00000110713 228 0.984 0.984 - - - - - - - - galactosidase, alpha [Source:ZFIN;Acc:ZDB-GENE-041010-207]
81. brap ENSDARG00000008560 821 0.983 0.983 - - - - - - - - BRCA1 associated protein [Source:ZFIN;Acc:ZDB-GENE-040718-168]
82. iah1 ENSDARG00000015765 326 0.983 0.983 - - - - - - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
83. dnajc27 ENSDARG00000070916 530 0.983 0.983 - - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 27 [Source:ZFIN;Acc:ZDB-GENE-081022-93]
84. wdr74 ENSDARG00000061993, ENSDARG00000111467, ENSDARG00000115634 416 0.983 0.983 - - - - - - - - WD repeat domain 74 [Source:ZFIN;Acc:ZDB-GENE-060929-1138]
85. nfe2l1b ENSDARG00000076533, ENSDARG00000114820 1574 0.983 0.983 - - - - - - - - nuclear factor, erythroid 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]
86. C11H19orf25 C11H19orf25 491 0.983 0.983 - - - - - - - -
87. clic1 ENSDARG00000103340 2235 0.982 0.982 - - - - - - - - chloride intracellular channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3202]
88. arglu1b ENSDARG00000018319 1110 0.982 0.982 - - - - - - - - arginine and glutamate rich 1b [Source:ZFIN;Acc:ZDB-GENE-040426-736]
89. pcnxl3 pcnxl3 756 0.982 0.982 - - - - - - - -
90. rnf11a ENSDARG00000010442 592 0.982 0.982 - - - - - - - - ring finger protein 11a [Source:ZFIN;Acc:ZDB-GENE-040426-1277]
91. grp ENSDARG00000043074 747 0.982 0.982 - - - - - - - - gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
92. BX005085.2 ENSDARG00000098122 196 0.981 0.981 - - - - - - - -
93. ankrd10b ENSDARG00000004771 654 0.98 0.980 - - - - - - - - ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
94. CU655970.1 CU655970.1 2123 0.98 0.980 - - - - - - - -
95. znf296 ENSDARG00000077897 658 0.98 0.980 - - - - - - - - zinc finger protein 296 [Source:ZFIN;Acc:ZDB-GENE-050419-201]
96. RNF5 ENSDARG00000075606 1730 0.979 0.979 - - - - - - - - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
97. thap4 ENSDARG00000077323 434 0.979 0.979 - - - - - - - - THAP domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-5]
98. mybl2 mybl2 1341 0.978 0.978 - - - - - - - -
99. DEDD ENSDARG00000029783 530 0.977 0.977 - - - - - - - - death effector domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-386]
100. si:ch211-218c6.8 ENSDARG00000092364 1270 0.976 0.976 - - - - - - - - si:ch211-218c6.8 [Source:ZFIN;Acc:ZDB-GENE-050419-103]

There are 1484 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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