Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-260c23.1

Gene Name Gene ID Reads Annotation
si:ch211-260c23.1 13 si:ch211-260c23.1, transcript variant X7










Genes with expression patterns similar to si:ch211-260c23.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-260c23.1 13 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-260c23.1, transcript variant X7
2. rpz3 ENSDARG00000069728 11 2.683 - 0.715 - - - 1.000 - - 0.968 rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
3. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 2.619 - 0.862 - - - 1.000 - 0.757 - v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
4. asb10 ENSDARG00000099461 27 2.423 - - - - 0.964 0.749 - 0.710 - ankyrin repeat and SOCS box containing 10 [Source:ZFIN;Acc:ZDB-GENE-060929-1106]
5. PUSL1 ENSDARG00000074565 54 2.355 0.702 - - 0.732 - - - 0.921 - pseudouridylate synthase like 1 [Source:ZFIN;Acc:ZDB-GENE-101110-1]
6. th2 ENSDARG00000038384 1 2 - - 1.000 - - 1.000 - - - tyrosine hydroxylase 2 [Source:ZFIN;Acc:ZDB-GENE-050201-1]
7. opn4a ENSDARG00000022098, ENSDARG00000110010 3 2 - - 1.000 - - 1.000 - - - opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
8. pik3ap1 ENSDARG00000078285 23 1.936 - - - - - 1.000 - 0.936 - phosphoinositide-3-kinase adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-250]
9. si:ch211-108c6.2 14 1.868 - - - - - 1.000 0.868 - - si:ch211-108c6.2
10. TMEM136 TMEM136 13 1.868 - - - - - 1.000 0.868 - -
11. olfcg9 ENSDARG00000105189 1 1.868 - - - - - 1.000 0.868 - - olfactory receptor C family, g9 [Source:ZFIN;Acc:ZDB-GENE-081029-6]
12. IAPP 2 1.868 - - - - - - 0.868 1.000 - islet amyloid polypeptide
13. olfcd1 ENSDARG00000008095 2 1.868 - - - - - - 0.868 1.000 - olfactory receptor C family, d1 [Source:ZFIN;Acc:ZDB-GENE-100721-9]
14. CABZ01079442.1 CABZ01079442.1 1 1.868 - - 1.000 - - - 0.868 - -
15. hid1b ENSDARG00000100583 35 1.862 - 0.862 - - - 1.000 - - - HID1 domain containing b [Source:ZFIN;Acc:ZDB-GENE-040718-239]
16. arhgap23b ENSDARG00000026840 6 1.862 - 0.862 - - - 1.000 - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
17. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 1.862 - 0.862 - - - 1.000 - - -
18. cacna2d2 cacna2d2 16 1.862 - 0.862 - - - - - - 1.000
19. klhl24 klhl24 40 1.836 - 0.836 - - - 1.000 - - -
20. BX927122.3 BX927122.3 19 1.832 - - - - - 1.000 - - 0.832
21. cacng7b ENSDARG00000070624 18 1.824 - - - - - 1.000 - 0.824 - calcium channel, voltage-dependent, gamma subunit 7b [Source:ZFIN;Acc:ZDB-GENE-100921-51]
22. chia.3 ENSDARG00000009612 14 1.807 - - - - - - 0.868 0.939 - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
23. b3gat1 b3gat1 77 1.799 - 0.862 - - - 0.937 - - -
24. si:dkey-1d7.3 ENSDARG00000075837 18 1.739 - - - - - 0.878 - 0.861 - si:dkey-1d7.3 [Source:ZFIN;Acc:ZDB-GENE-091118-46]
25. cbln2b ENSDARG00000077151 38 1.735 - 0.862 - - - 0.873 - - - cerebellin 2b precursor [Source:ZFIN;Acc:ZDB-GENE-070615-12]
26. ARHGEF38 ENSDARG00000079377 9 1.73 - 0.862 - - - - 0.868 - - Rho guanine nucleotide exchange factor (GEF) 38 [Source:ZFIN;Acc:ZDB-GENE-090313-83]
27. si:dkey-103k4.5 si:dkey-103k4.5 11 1.73 - 0.862 - - - - 0.868 - -
28. TRMT12 ENSDARG00000060338 58 1.725 0.725 - - - - - 1.000 - - tRNA methyltransferase 12 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-182]
29. si:dkey-63d15.12 ENSDARG00000075480 9 1.725 0.725 - - - - 1.000 - - - si:dkey-63d15.12 [Source:ZFIN;Acc:ZDB-GENE-080303-18]
30. ahr1b ENSDARG00000023537 44 1.725 - 0.725 - - - 1.000 - - - aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
31. ENKD1 ENSDARG00000043550 44 1.725 0.725 - - - - 1.000 - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
32. CABZ01112732.1 ENSDARG00000068453 4 1.725 0.725 - - - - 1.000 - - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
33. SLC4A8 ENSDARG00000015531 16 1.725 0.725 - 1.000 - - - - - - solute carrier family 4, sodium bicarbonate cotransporter, member 8 [Source:ZFIN;Acc:ZDB-GENE-131119-88]
34. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 1.717 - - - - 0.717 1.000 - - - pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]
35. C3H19orf66 C3H19orf66 20 1.715 - 0.715 - - - 1.000 - - -
36. colm colm 36 1.689 - 0.821 - - - - 0.868 - -
37. epdr1 ENSDARG00000045420 132 1.672 - 0.795 - - - 0.877 - - - ependymin related 1 [Source:ZFIN;Acc:ZDB-GENE-040718-113]
38. stxbp6l ENSDARG00000028354, ENSDARG00000112083, ENSDARG00000113476 43 1.662 - - - - - 0.794 0.868 - - syntaxin binding protein 6 (amisyn), like [Source:ZFIN;Acc:ZDB-GENE-040724-16]
39. cdkl5 ENSDARG00000015240 68 1.642 - 0.883 - - - - - 0.759 - cyclin-dependent kinase-like 5 [Source:ZFIN;Acc:ZDB-GENE-081022-110]
40. LAMTOR1 ENSDARG00000076464 27 1.637 - 0.856 - - - - - 0.781 - late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 [Source:ZFIN;Acc:ZDB-GENE-130819-1]
41. spred3 ENSDARG00000040358 134 1.631 - - - - - 0.921 0.710 - - sprouty-related, EVH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061207-31]
42. CABZ01112647.1 CABZ01112647.1 147 1.629 - - - - - 0.722 - - 0.907
43. edil3 edil3 24 1.627 - - - - - 0.764 0.863 - -
44. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1.622 - - - - - 0.754 0.868 - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
45. si:dkey-256h2.1 ENSDARG00000021849 38 1.611 - 0.862 - - - - - - 0.749 si:dkey-256h2.1 [Source:ZFIN;Acc:ZDB-GENE-030131-9466]
46. si:ch211-253p18.2 ENSDARG00000092770 21 1.604 - 0.862 - - - - - 0.742 - si:ch211-253p18.2 [Source:ZFIN;Acc:ZDB-GENE-041001-106]
47. SLC13A5 SLC13A5 31 1.599 - 0.862 - - - - - - 0.737
48. CHST15 ENSDARG00000074527 210 1.593 0.725 - - - - - 0.868 - - carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 [Source:ZFIN;Acc:ZDB-GENE-131127-327]
49. THSD7B THSD7B 15 1.589 0.725 - - - - 0.864 - - -
50. cyp46a2 cyp46a2 38 1.587 0.725 0.862 - - - - - - -
51. slc16a12a ENSDARG00000017773 47 1.579 - 0.816 - - - - - - 0.763 solute carrier family 16, member 12a [Source:ZFIN;Acc:ZDB-GENE-080721-24]
52. si:ch211-136m16.8 ENSDARG00000090767 91 1.577 - 0.862 - - - - 0.715 - - si:ch211-136m16.8 [Source:ZFIN;Acc:ZDB-GENE-121214-301]
53. CABZ01044356.1 CABZ01044356.1 36 1.551 - - - - - 0.749 0.802 - -
54. brinp3b ENSDARG00000075352 14 1.547 - - - - - 0.771 - - 0.776 bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
55. pou4f2 ENSDARG00000069737 451 1.535 - 0.730 - - - - 0.805 - - POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
56. asb18 ENSDARG00000012948, ENSDARG00000114572 22 1.529 - - - - - - 0.700 0.829 - ankyrin repeat and SOCS box containing 18 [Source:ZFIN;Acc:ZDB-GENE-090313-391]
57. si:ch73-119o17.1 si:ch73-119o17.1 6 1.517 0.725 - - - - - - 0.792 -
58. dscamb ENSDARG00000028118 82 1.497 - 0.730 - - - 0.767 - - - Down syndrome cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-031118-67]
59. pole2 ENSDARG00000100028 42 1 - - - - - 1.000 - - - polymerase (DNA directed), epsilon 2 [Source:ZFIN;Acc:ZDB-GENE-020419-16]
60. U1_46 U1_46 1 1 - - 1.000 - - - - - -
61. CR925880.1 CR925880.1 196 1 - - - - - - 1.000 - -
62. nab2 ENSDARG00000078076 108 1 - - - - - 1.000 - - - NGFI-A binding protein 2 (EGR1 binding protein 2) [Source:ZFIN;Acc:ZDB-GENE-080204-105]
63. si:ch211-222f23.6 ENSDARG00000042880 3 1 - - - - - - - 1.000 - si:ch211-222f23.6 [Source:ZFIN;Acc:ZDB-GENE-070912-208]
64. si:dkey-253d23.9 ENSDARG00000074820 24 1 - - - - - 1.000 - - - si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
65. htr1bd htr1bd 8 1 - - - - - 1.000 - - -
66. si:ch211-89f22.1 si:ch211-89f22.1 11 1 - - - - - 1.000 - - -
67. il21r il21r 74 1 - - - - - 1.000 - - -
68. si:dkey-78o7.3 ENSDARG00000100387 59 1 - - - - - 1.000 - - - si:dkey-78o7.3 [Source:ZFIN;Acc:ZDB-GENE-120709-79]
69. ela2l ENSDARG00000056765, ENSDARG00000114256 31 1 - - - - - 1.000 - - - elastase 2 like [Source:ZFIN;Acc:ZDB-GENE-040511-1]
70. cep89 ENSDARG00000005092 4 1 - - - - - 1.000 - - - centrosomal protein 89 [Source:ZFIN;Acc:ZDB-GENE-040426-1210]
71. NUGGC NUGGC 9 1 - - - - - 1.000 - - -
72. leprel4 leprel4 34 1 - - - - - 1.000 - - -
73. CABZ01083815.1 ENSDARG00000105488 4 1 - - - - - - 1.000 - -
74. CU694372.1 ENSDARG00000097988 105 1 - - - - - 1.000 - - -
75. CU638740.4 CU638740.4 1 1 - - - - - 1.000 - - -
76. CMA1_10 CMA1_10 0 1 - - - - - 1.000 - - -
77. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1 - - - - - 1.000 - - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
78. CCSER1 ENSDARG00000075919 16 1 - - - - - 1.000 - - - coiled-coil serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-422]
79. CU459095.1 CU459095.1 7 1 - - - - - 1.000 - - -
80. si:ch211-260g14.9 si:ch211-260g14.9 2 1 - - - - - 1.000 - - -
81. mettl8 ENSDARG00000017359 36 1 - - - - - 1.000 - - - methyltransferase like 8 [Source:ZFIN;Acc:ZDB-GENE-041114-19]
82. aptx ENSDARG00000027143 87 1 - - - - - 1.000 - - - aprataxin [Source:ZFIN;Acc:ZDB-GENE-040628-2]
83. si:dkey-208k4.10 si:dkey-208k4.10 1 1 - - - - - 1.000 - - -
84. PLBD1 ENSDARG00000063313 1 1 - - 1.000 - - - - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
85. gfpt1 ENSDARG00000057465 14 1 - - - - - 1.000 - - - glutamine--fructose-6-phosphate transaminase 1 [Source:ZFIN;Acc:ZDB-GENE-070423-1]
86. si:ch211-167j6.3 ENSDARG00000095504 5 1 - - 1.000 - - - - - - si:ch211-167j6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-145]
87. olfm3b ENSDARG00000039174 3 1 - - 1.000 - - - - - - olfactomedin 3b [Source:ZFIN;Acc:ZDB-GENE-070912-606]
88. mcm6l ENSDARG00000033231, ENSDARG00000111624 23 1 - 1.000 - - - - - - - MCM6 minichromosome maintenance deficient 6, like [Source:ZFIN;Acc:ZDB-GENE-050913-141]
89. si:ch211-258f1.3 ENSDARG00000105119 23 1 - - - - - 1.000 - - - si:ch211-258f1.3 [Source:ZFIN;Acc:ZDB-GENE-070912-252]
90. hs6st3b ENSDARG00000069500 5 1 - - - - - 1.000 - - - heparan sulfate 6-O-sulfotransferase 3b [Source:ZFIN;Acc:ZDB-GENE-070103-3]
91. CU468896.2 CU468896.2 38 1 - - - - - 1.000 - - -
92. lpar5b ENSDARG00000068638 2 1 - - - - - 1.000 - - - lysophosphatidic acid receptor 5b [Source:ZFIN;Acc:ZDB-GENE-081022-116]
93. si:dkey-22i16.9 ENSDARG00000095949 16 1 - - - - - - - - 1.000 si:dkey-22i16.9 [Source:ZFIN;Acc:ZDB-GENE-090313-261]
94. scg5_1 ENSDARG00000032126, ENSDARG00000077045 6 1 - - - - - 1.000 - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
95. taar14d ENSDARG00000091705, ENSDARG00000111452 1 1 - - - - - 1.000 - - - trace amine associated receptor 14d [Source:ZFIN;Acc:ZDB-GENE-041210-315]
96. CABZ01083834.1 CABZ01083834.1 38 1 - - - - - 1.000 - - -
97. bicc2_1 ENSDARG00000076557 6 1 - - - - - - - 1.000 - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
98. si:ch211-234c11.2 ENSDARG00000093041, ENSDARG00000109255 1 1 - - 1.000 - - - - - - si:ch211-234c11.2 [Source:ZFIN;Acc:ZDB-GENE-110914-70]
99. CABZ01051641.1 CABZ01051641.1 0 1 - - - - - 1.000 - - -
100. zgc:92161 ENSDARG00000101749 27 1 - - - - - 1.000 - - - zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]

There are 1155 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA