Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-260c23.1

Gene Name Gene ID Reads Annotation
si:ch211-260c23.1 13 si:ch211-260c23.1, transcript variant X7










Genes with expression patterns similar to si:ch211-260c23.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-260c23.1 13 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-260c23.1, transcript variant X7
2. rpz3 ENSDARG00000069728 11 2.683 - 0.715 - - - 1.000 - - 0.968 rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
3. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 2.619 - 0.862 - - - 1.000 - 0.757 - v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
4. asb10 ENSDARG00000099461 27 2.423 - - - - 0.964 0.749 - 0.710 - ankyrin repeat and SOCS box containing 10 [Source:ZFIN;Acc:ZDB-GENE-060929-1106]
5. PUSL1 ENSDARG00000074565 54 2.355 0.702 - - 0.732 - - - 0.921 - pseudouridylate synthase like 1 [Source:ZFIN;Acc:ZDB-GENE-101110-1]
6. opn4a ENSDARG00000022098, ENSDARG00000110010 3 2 - - 1.000 - - 1.000 - - - opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
7. th2 ENSDARG00000038384 1 2 - - 1.000 - - 1.000 - - - tyrosine hydroxylase 2 [Source:ZFIN;Acc:ZDB-GENE-050201-1]
8. pik3ap1 ENSDARG00000078285 23 1.936 - - - - - 1.000 - 0.936 - phosphoinositide-3-kinase adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-250]
9. TMEM136 TMEM136 13 1.868 - - - - - 1.000 0.868 - -
10. olfcg9 ENSDARG00000105189 1 1.868 - - - - - 1.000 0.868 - - olfactory receptor C family, g9 [Source:ZFIN;Acc:ZDB-GENE-081029-6]
11. CABZ01079442.1 CABZ01079442.1 1 1.868 - - 1.000 - - - 0.868 - -
12. IAPP 2 1.868 - - - - - - 0.868 1.000 - islet amyloid polypeptide
13. olfcd1 ENSDARG00000008095 2 1.868 - - - - - - 0.868 1.000 - olfactory receptor C family, d1 [Source:ZFIN;Acc:ZDB-GENE-100721-9]
14. si:ch211-108c6.2 14 1.868 - - - - - 1.000 0.868 - - si:ch211-108c6.2
15. cacna2d2 cacna2d2 16 1.862 - 0.862 - - - - - - 1.000
16. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 1.862 - 0.862 - - - 1.000 - - -
17. arhgap23b ENSDARG00000026840 6 1.862 - 0.862 - - - 1.000 - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
18. hid1b ENSDARG00000100583 35 1.862 - 0.862 - - - 1.000 - - - HID1 domain containing b [Source:ZFIN;Acc:ZDB-GENE-040718-239]
19. klhl24 klhl24 40 1.836 - 0.836 - - - 1.000 - - -
20. BX927122.3 BX927122.3 19 1.832 - - - - - 1.000 - - 0.832
21. cacng7b ENSDARG00000070624 18 1.824 - - - - - 1.000 - 0.824 - calcium channel, voltage-dependent, gamma subunit 7b [Source:ZFIN;Acc:ZDB-GENE-100921-51]
22. chia.3 ENSDARG00000009612 14 1.807 - - - - - - 0.868 0.939 - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
23. b3gat1 b3gat1 77 1.799 - 0.862 - - - 0.937 - - -
24. si:dkey-1d7.3 ENSDARG00000075837 18 1.739 - - - - - 0.878 - 0.861 - si:dkey-1d7.3 [Source:ZFIN;Acc:ZDB-GENE-091118-46]
25. cbln2b ENSDARG00000077151 38 1.735 - 0.862 - - - 0.873 - - - cerebellin 2b precursor [Source:ZFIN;Acc:ZDB-GENE-070615-12]
26. si:dkey-103k4.5 si:dkey-103k4.5 11 1.73 - 0.862 - - - - 0.868 - -
27. ARHGEF38 ENSDARG00000079377 9 1.73 - 0.862 - - - - 0.868 - - Rho guanine nucleotide exchange factor (GEF) 38 [Source:ZFIN;Acc:ZDB-GENE-090313-83]
28. SLC4A8 ENSDARG00000015531 16 1.725 0.725 - 1.000 - - - - - - solute carrier family 4, sodium bicarbonate cotransporter, member 8 [Source:ZFIN;Acc:ZDB-GENE-131119-88]
29. CABZ01112732.1 ENSDARG00000068453 4 1.725 0.725 - - - - 1.000 - - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
30. TRMT12 ENSDARG00000060338 58 1.725 0.725 - - - - - 1.000 - - tRNA methyltransferase 12 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-182]
31. si:dkey-63d15.12 ENSDARG00000075480 9 1.725 0.725 - - - - 1.000 - - - si:dkey-63d15.12 [Source:ZFIN;Acc:ZDB-GENE-080303-18]
32. ENKD1 ENSDARG00000043550 44 1.725 0.725 - - - - 1.000 - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
33. ahr1b ENSDARG00000023537 44 1.725 - 0.725 - - - 1.000 - - - aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
34. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 1.717 - - - - 0.717 1.000 - - - pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]
35. C3H19orf66 C3H19orf66 20 1.715 - 0.715 - - - 1.000 - - -
36. colm colm 36 1.689 - 0.821 - - - - 0.868 - -
37. epdr1 ENSDARG00000045420 132 1.672 - 0.795 - - - 0.877 - - - ependymin related 1 [Source:ZFIN;Acc:ZDB-GENE-040718-113]
38. stxbp6l ENSDARG00000028354, ENSDARG00000112083, ENSDARG00000113476 43 1.662 - - - - - 0.794 0.868 - - syntaxin binding protein 6 (amisyn), like [Source:ZFIN;Acc:ZDB-GENE-040724-16]
39. cdkl5 ENSDARG00000015240 68 1.642 - 0.883 - - - - - 0.759 - cyclin-dependent kinase-like 5 [Source:ZFIN;Acc:ZDB-GENE-081022-110]
40. LAMTOR1 ENSDARG00000076464 27 1.637 - 0.856 - - - - - 0.781 - late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 [Source:ZFIN;Acc:ZDB-GENE-130819-1]
41. spred3 ENSDARG00000040358 134 1.631 - - - - - 0.921 0.710 - - sprouty-related, EVH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061207-31]
42. CABZ01112647.1 CABZ01112647.1 147 1.629 - - - - - 0.722 - - 0.907
43. edil3 edil3 24 1.627 - - - - - 0.764 0.863 - -
44. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1.622 - - - - - 0.754 0.868 - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
45. si:dkey-256h2.1 ENSDARG00000021849 38 1.611 - 0.862 - - - - - - 0.749 si:dkey-256h2.1 [Source:ZFIN;Acc:ZDB-GENE-030131-9466]
46. si:ch211-253p18.2 ENSDARG00000092770 21 1.604 - 0.862 - - - - - 0.742 - si:ch211-253p18.2 [Source:ZFIN;Acc:ZDB-GENE-041001-106]
47. SLC13A5 SLC13A5 31 1.599 - 0.862 - - - - - - 0.737
48. CHST15 ENSDARG00000074527 210 1.593 0.725 - - - - - 0.868 - - carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 [Source:ZFIN;Acc:ZDB-GENE-131127-327]
49. THSD7B THSD7B 15 1.589 0.725 - - - - 0.864 - - -
50. cyp46a2 cyp46a2 38 1.587 0.725 0.862 - - - - - - -
51. slc16a12a ENSDARG00000017773 47 1.579 - 0.816 - - - - - - 0.763 solute carrier family 16, member 12a [Source:ZFIN;Acc:ZDB-GENE-080721-24]
52. si:ch211-136m16.8 ENSDARG00000090767 91 1.577 - 0.862 - - - - 0.715 - - si:ch211-136m16.8 [Source:ZFIN;Acc:ZDB-GENE-121214-301]
53. CABZ01044356.1 CABZ01044356.1 36 1.551 - - - - - 0.749 0.802 - -
54. brinp3b ENSDARG00000075352 14 1.547 - - - - - 0.771 - - 0.776 bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
55. pou4f2 ENSDARG00000069737 451 1.535 - 0.730 - - - - 0.805 - - POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
56. asb18 ENSDARG00000012948, ENSDARG00000114572 22 1.529 - - - - - - 0.700 0.829 - ankyrin repeat and SOCS box containing 18 [Source:ZFIN;Acc:ZDB-GENE-090313-391]
57. si:ch73-119o17.1 si:ch73-119o17.1 6 1.517 0.725 - - - - - - 0.792 -
58. dscamb ENSDARG00000028118 82 1.497 - 0.730 - - - 0.767 - - - Down syndrome cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-031118-67]
59. BEGAIN_1 BEGAIN_1 7 1 - - - - - 1.000 - - -
60. si:dkey-92c21.3 si:dkey-92c21.3 2 1 - - 1.000 - - - - - -
61. morc3b ENSDARG00000043271 8 1 - - 1.000 - - - - - - MORC family CW-type zinc finger 3b [Source:ZFIN;Acc:ZDB-GENE-040801-98]
62. CU896645.1 CU896645.1 10 1 - - - - - 1.000 - - -
63. cdc42ep2 ENSDARG00000053959 32 1 - - - - - 1.000 - - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
64. si:dkey-11o15.7 ENSDARG00000058023, ENSDARG00000089758 0 1 - - - - - 1.000 - - - si:dkey-11o15.7 [Source:ZFIN;Acc:ZDB-GENE-091204-328]
65. si:dkey-109j17.5 ENSDARG00000104891 2 1 - - - - - 1.000 - - - si:dkey-109j17.5 [Source:ZFIN;Acc:ZDB-GENE-090313-173]
66. mucms1 ENSDARG00000069566 0 1 - - - - - 1.000 - - - mucin, multiple PTS and SEA group, member 1 [Source:ZFIN;Acc:ZDB-GENE-061009-17]
67. BX000981.1 ENSDARG00000092940 1 1 - - - - - 1.000 - - -
68. ankrd52a ENSDARG00000036826, ENSDARG00000112185 7 1 - - - - - 1.000 - - - ankyrin repeat domain 52a [Source:ZFIN;Acc:ZDB-GENE-050522-247]
69. si:ch211-209f23.3 ENSDARG00000095607 15 1 1.000 - - - - - - - - si:ch211-209f23.3 [Source:ZFIN;Acc:ZDB-GENE-100921-45]
70. si:dkey-93m18.5 si:dkey-93m18.5 2 1 - - 1.000 - - - - - -
71. si:dkey-228d14.8 si:dkey-228d14.8 3 1 - - 1.000 - - - - - -
72. gng2 ENSDARG00000056831 81 1 - - - - - 1.000 - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
73. si:dkey-253d23.8 ENSDARG00000094427 26 1 - 1.000 - - - - - - - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
74. si:dkey-105n5.3 si:dkey-105n5.3 9 1 - - - - - 1.000 - - -
75. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 1 - - - - - 1.000 - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
76. FAM13C FAM13C 1 1 - - - - - 1.000 - - -
77. zgc:173570 ENSDARG00000037645, ENSDARG00000114242 46 1 - 1.000 - - - - - - - zgc:173570 [Source:ZFIN;Acc:ZDB-GENE-080218-15]
78. SLC37A4 SLC37A4 10 1 1.000 - - - - - - - -
79. olfcd3 ENSDARG00000068576 0 1 - - - - - 1.000 - - - olfactory receptor C family, d3 [Source:ZFIN;Acc:ZDB-GENE-050712-4]
80. si:ch211-76l23.5 si:ch211-76l23.5 26 1 - - - - - 1.000 - - -
81. CU570981.1 CU570981.1 9 1 - - 1.000 - - - - - -
82. si:ch211-207e7.1 si:ch211-207e7.1 33 1 - - - - - 1.000 - - -
83. si:dkey-167k11.3 si:dkey-167k11.3 3 1 - - - - - 1.000 - - -
84. MFAP4_5 MFAP4_5 4 1 - - - - - 1.000 - - -
85. C14orf80 C14orf80 20 1 - - - - - 1.000 - - -
86. rrh ENSDARG00000039534 4 1 - - - - - 1.000 - - - retinal pigment epithelium-derived rhodopsin homolog [Source:ZFIN;Acc:ZDB-GENE-040912-94]
87. si:ch73-346o4.3 si:ch73-346o4.3 29 1 - - - - - 1.000 - - -
88. vwc2 ENSDARG00000076495 22 1 - - - - - 1.000 - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
89. nbn ENSDARG00000040303 43 1 - - - - - 1.000 - - - nibrin [Source:ZFIN;Acc:ZDB-GENE-041008-35]
90. si:ch211-10j20.5 si:ch211-10j20.5 2 1 - - - - - - - - 1.000
91. ripply2 ENSDARG00000070535 18 1 - 1.000 - - - - - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
92. CABZ01023423.1 CABZ01023423.1 8 1 - - - - - 1.000 - - -
93. CABZ01085048.1 CABZ01085048.1 2 1 - - - - - - - - 1.000
94. gpr88 24 1 - - - - - 1.000 - - - G protein-coupled receptor 88
95. mdm1 ENSDARG00000045675 64 1 - - - - - 1.000 - - - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
96. FAM175B FAM175B 23 1 - 1.000 - - - - - - -
97. si:ch211-208k15.1 ENSDARG00000088650 11 1 - - - - - 1.000 - - - si:ch211-208k15.1 [Source:ZFIN;Acc:ZDB-GENE-100922-189]
98. si:ch211-274k16.6 si:ch211-274k16.6 26 1 - - - - - 1.000 - - -
99. CR846080.4 CR846080.4 6 1 - - - - - 1.000 - - -
100. si:dkey-47k20.7 ENSDARG00000056014 1 1 - - - - - 1.000 - - - si:dkey-47k20.7 [Source:ZFIN;Acc:ZDB-GENE-060503-264]

There are 1155 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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