Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-260b17.6

Gene Name Gene ID Reads Annotation
si:ch211-260b17.6 32 si:ch211-260b17.6










Genes with expression patterns similar to si:ch211-260b17.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-260b17.6 32 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-260b17.6
2. CABZ01072037.1 CABZ01072037.1 2 1.995 1.000 - 0.995 - - - - - -
3. KRT18_1 KRT18_1 17 1.989 1.000 - 0.989 - - - - - -
4. fbxl18 ENSDARG00000007443, ENSDARG00000113264 178 1.855 0.874 - - - - 0.981 - - - F-box and leucine-rich repeat protein 18 [Source:ZFIN;Acc:ZDB-GENE-050913-65]
5. SCARB2 SCARB2 24 1.84 - - 0.901 - - 0.939 - - -
6. tmem79b ENSDARG00000076861 154 1.839 0.937 - - - - 0.902 - - - transmembrane protein 79b [Source:ZFIN;Acc:ZDB-GENE-120807-1]
7. DHDH DHDH 15 1.807 0.819 - - - - 0.988 - - -
8. CR932000.1 ENSDARG00000097733 40 1.803 0.919 - 0.884 - - - - - -
9. si:ch211-223a21.3 ENSDARG00000104737 28 1.755 - - 0.767 - - 0.988 - - - si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]
10. zgc:112263 zgc:112263 473 1.749 - - 0.837 - - 0.912 - - -
11. OXSM ENSDARG00000098855 253 1.727 - - - - - 0.950 0.777 - - 3-oxoacyl-ACP synthase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-170215-2]
12. tmc1 23 1.679 - - - - - 0.902 - - 0.777 transmembrane channel-like 1, transcript variant X1
13. si:ch211-259i2.2 si:ch211-259i2.2 45 1.596 0.796 - - - - 0.800 - - -
14. itga9 ENSDARG00000032435 35 1.594 - - - - - 0.884 - - 0.710 integrin, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1129]
15. CSGALNACT1 CSGALNACT1 116 1.436 0.707 - - - 0.729 - - - -
16. lpar5b ENSDARG00000068638 2 1 1.000 - - - - - - - - lysophosphatidic acid receptor 5b [Source:ZFIN;Acc:ZDB-GENE-081022-116]
17. rhoga ENSDARG00000068653 13 1 1.000 - - - - - - - - ras homolog family member Ga [Source:ZFIN;Acc:ZDB-GENE-060503-820]
18. sntb1 ENSDARG00000041729 163 1 1.000 - - - - - - - - syntrophin, basic 1 [Source:ZFIN;Acc:ZDB-GENE-040704-13]
19. opa1 ENSDARG00000070801 57 1 1.000 - - - - - - - - optic atrophy 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-041114-7]
20. AL935293.1 AL935293.1 2 1 1.000 - - - - - - - -
21. ZNF407 ENSDARG00000087536 6 1 1.000 - - - - - - - - zinc finger protein 407 [Source:ZFIN;Acc:ZDB-GENE-110411-123]
22. CDHR5 CDHR5 2 1 1.000 - - - - - - - -
23. CR847906.1 ENSDARG00000099493 88 1 1.000 - - - - - - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
24. C1S_1 C1S_1 11 1 1.000 - - - - - - - -
25. si:dkey-163m14.5 si:dkey-163m14.5 1 1 1.000 - - - - - - - -
26. gper gper 4 1 1.000 - - - - - - - -
27. ptpn20 ENSDARG00000075459 1 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 20 [Source:ZFIN;Acc:ZDB-GENE-090313-90]
28. nkiras2_1 ENSDARG00000052594 31 1 1.000 - - - - - - - - NFKB inhibitor interacting Ras-like 2 [Source:ZFIN;Acc:ZDB-GENE-040801-166]
29. si:dkey-78i1.2 si:dkey-78i1.2 15 1 1.000 - - - - - - - -
30. ZNF135_3 ZNF135_3 1 1 1.000 - - - - - - - -
31. abcg1 ENSDARG00000063475 97 1 1.000 - - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
32. CU183952.1 CU183952.1 32 1 1.000 - - - - - - - -
33. mab21l3 ENSDARG00000076013, ENSDARG00000112160 35 1 1.000 - - - - - - - - mab-21-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-242]
34. fabp10a ENSDARG00000038439 4 1 1.000 - - - - - - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
35. DUSP13_1 DUSP13_1 425 1 1.000 - - - - - - - -
36. tecta ENSDARG00000059558 15 1 1.000 - - - - - - - - tectorin alpha [Source:ZFIN;Acc:ZDB-GENE-110411-120]
37. si:dkeyp-46h3.8 ENSDARG00000093704 9 1 1.000 - - - - - - - - si:dkeyp-46h3.8 [Source:ZFIN;Acc:ZDB-GENE-060503-183]
38. b3gntl1 ENSDARG00000043431 50 1 1.000 - - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050913-133]
39. cep68 ENSDARG00000039411 30 1 1.000 - - - - - - - - centrosomal protein 68 [Source:ZFIN;Acc:ZDB-GENE-030616-565]
40. htr6 ENSDARG00000016095 9 1 1.000 - - - - - - - - 5-hydroxytryptamine (serotonin) receptor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7839]
41. si:ch211-150j10.4 ENSDARG00000079336 23 1 1.000 - - - - - - - - si:ch211-150j10.4 [Source:ZFIN;Acc:ZDB-GENE-110411-215]
42. ctrl ENSDARG00000068680 18 1 1.000 - - - - - - - - chymotrypsin-like [Source:ZFIN;Acc:ZDB-GENE-040912-147]
43. oxtrl ENSDARG00000044175 10 1 1.000 - - - - - - - - oxytocin receptor like [Source:ZFIN;Acc:ZDB-GENE-110805-1]
44. arhgap15 ENSDARG00000062349 28 1 1.000 - - - - - - - - Rho GTPase activating protein 15 [Source:ZFIN;Acc:ZDB-GENE-070912-314]
45. matn3a ENSDARG00000069245 2410 1 1.000 - - - - - - - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
46. si:dkey-54f18.2 si:dkey-54f18.2 27 1 1.000 - - - - - - - -
47. RNF214_1 RNF214_1 5 1 1.000 - - - - - - - -
48. LRFN4 LRFN4 59 1 1.000 - - - - - - - -
49. si:ch211-168h21.3 10 1 1.000 - - - - - - - - si:ch211-168h21.3
50. si:dkey-61p9.11 ENSDARG00000096762, ENSDARG00000110448 2 1 1.000 - - - - - - - - si:dkey-61p9.11 [Source:ZFIN;Acc:ZDB-GENE-041210-242]
51. SYTL2 SYTL2 139 1 1.000 - - - - - - - -
52. si:ch73-127m5.3 si:ch73-127m5.3 1 1 1.000 - - - - - - - -
53. rsad1 ENSDARG00000077698, ENSDARG00000112179 93 1 1.000 - - - - - - - - radical S-adenosyl methionine domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2508]
54. CABZ01090975.1 CABZ01090975.1 9 1 1.000 - - - - - - - -
55. CCDC37 CCDC37 10 1 1.000 - - - - - - - -
56. cx28.8 ENSDARG00000071042 62 1 1.000 - - - - - - - - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
57. znhit3 ENSDARG00000023950 61 1 1.000 - - - - - - - - zinc finger, HIT-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1114]
58. zdhhc2 ENSDARG00000034757, ENSDARG00000110118 28 1 1.000 - - - - - - - - zinc finger, DHHC-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-58]
59. SLC35A3_1 SLC35A3_1 35 1 1.000 - - - - - - - -
60. BX511182.1 BX511182.1 8 1 1.000 - - - - - - - -
61. si:ch211-142k18.1 1 1 1.000 - - - - - - - - si:ch211-142k18.1
62. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1 1.000 - - - - - - - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
63. dnm2a ENSDARG00000069937 32 1 1.000 - - - - - - - - dynamin 2a [Source:ZFIN;Acc:ZDB-GENE-050913-84]
64. BX004994.2 BX004994.2 17 1 1.000 - - - - - - - -
65. ccdc129 37 1 1.000 - - - - - - - - coiled-coil domain containing 129, transcript variant X2
66. gria1b ENSDARG00000032714, ENSDARG00000111658 12 1 1.000 - - - - - - - - glutamate receptor, ionotropic, AMPA 1b [Source:ZFIN;Acc:ZDB-GENE-020125-2]
67. Metazoa_SRP_29 Metazoa_SRP_29 1 1 1.000 - - - - - - - -
68. BX897714.3 BX897714.3 3 1 1.000 - - - - - - - -
69. si:ch211-202n12.5 si:ch211-202n12.5 19 1 1.000 - - - - - - - -
70. grapb ENSDARG00000022668 6 1 1.000 - - - - - - - - GRB2 related adaptor protein b [Source:ZFIN;Acc:ZDB-GENE-050913-4]
71. ZBTB42 ENSDARG00000102761 2 1 1.000 - - - - - - - - zinc finger and BTB domain containing 42 [Source:ZFIN;Acc:ZDB-GENE-130730-2]
72. GPR137B_1 GPR137B_1 8 1 1.000 - - - - - - - -
73. si:ch211-195i24.1 si:ch211-195i24.1 10 1 1.000 - - - - - - - -
74. tceb3 40 1 1.000 - - - - - - - - transcription elongation factor B (SIII), polypeptide 3
75. GLIPR1 GLIPR1 37 1 1.000 - - - - - - - -
76. si:dkey-179o14.4 si:dkey-179o14.4 2 1 1.000 - - - - - - - -
77. CABZ01072557.1 CABZ01072557.1 9 1 1.000 - - - - - - - -
78. p4ha1a ENSDARG00000033537, ENSDARG00000114754 38 1 1.000 - - - - - - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
79. tmprss13a ENSDARG00000100969 84 1 1.000 - - - - - - - - transmembrane serine protease 13a [Source:ZFIN;Acc:ZDB-GENE-090309-3]
80. zgc:153441 ENSDARG00000054797 9 1 1.000 - - - - - - - - zgc:153441 [Source:ZFIN;Acc:ZDB-GENE-060825-39]
81. BX897671.1 BX897671.1 10 1 1.000 - - - - - - - -
82. si:ch73-189n23.1 ENSDARG00000086247 15 1 1.000 - - - - - - - - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
83. CABZ01046432.1 ENSDARG00000079325 11 1 1.000 - - - - - - - - uncharacterized LOC100331045 [Source:NCBI gene;Acc:100331045]
84. si:ch211-80h18.1 ENSDARG00000078522 1941 1 1.000 - - - - - - - - si:ch211-80h18.1 [Source:ZFIN;Acc:ZDB-GENE-070705-257]
85. CR387932.1 ENSDARG00000097344 2 1 1.000 - - - - - - - -
86. aven ENSDARG00000002894 49 1 1.000 - - - - - - - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
87. zgc:194275 ENSDARG00000074014 130 1 1.000 - - - - - - - - zgc:194275 [Source:ZFIN;Acc:ZDB-GENE-081022-92]
88. CU633479.6 ENSDARG00000116146 4 1 1.000 - - - - - - - -
89. MSH4 ENSDARG00000075826 37 1 1.000 - - - - - - - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
90. C25H19orf40 C25H19orf40 17 1 1.000 - - - - - - - -
91. si:dkey-167k11.3 si:dkey-167k11.3 3 1 1.000 - - - - - - - -
92. CR936371.2 ENSDARG00000117302 2 1 1.000 - - - - - - - -
93. carm1l ENSDARG00000091531 13 1 1.000 - - - - - - - - coactivator-associated arginine methyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-090312-219]
94. gadd45aa ENSDARG00000043581 114 1 1.000 - - - - - - - - growth arrest and DNA-damage-inducible, alpha, a [Source:ZFIN;Acc:ZDB-GENE-040426-1501]
95. cep41 ENSDARG00000038500, ENSDARG00000117114 4 1 1.000 - - - - - - - - centrosomal protein 41 [Source:ZFIN;Acc:ZDB-GENE-040704-35]
96. echdc1 68 1 1.000 - - - - - - - - enoyl CoA hydratase domain containing 1, transcript variant 1
97. SLC9A3R2_1 SLC9A3R2_1 28 1 1.000 - - - - - - - -
98. rictora ENSDARG00000100867 20 1 1.000 - - - - - - - - RPTOR independent companion of MTOR, complex 2 a [Source:ZFIN;Acc:ZDB-GENE-060526-49]
99. lgi1b ENSDARG00000058421 12 1 1.000 - - - - - - - - leucine-rich, glioma inactivated 1b [Source:ZFIN;Acc:ZDB-GENE-060217-1]
100. ptpn6_1 ENSDARG00000089043 22 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]

There are 641 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA