Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-254n4.1

Gene Name Gene ID Reads Annotation
si:ch211-254n4.1 si:ch211-254n4.1 36










Genes with expression patterns similar to si:ch211-254n4.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-254n4.1 si:ch211-254n4.1 36 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. trpa1b ENSDARG00000031875 39 1.859 - - - - - 0.930 0.929 - - transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]
3. CABZ01041604.1 ENSDARG00000059854 35 1.821 - - - - 1.000 0.821 - - - E3 ubiquitin-protein ligase RNF182-like [Source:NCBI gene;Acc:797048]
4. zgc:77112 ENSDARG00000015657 24 1.82 - - 0.890 - - 0.930 - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
5. syt9b ENSDARG00000029239 31 1.752 - - - - - 0.930 0.822 - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
6. SYNDIG1 ENSDARG00000100751 165 1.717 - - 0.846 - - 0.871 - - - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
7. GLIPR1 GLIPR1 37 1.715 - - 0.954 - - - - - 0.761
8. dnah1 ENSDARG00000100115 17 1.694 - - 0.990 - - - - - 0.704 dynein, axonemal, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-081015-3]
9. CU694315.1 CU694315.1 87 1.688 - - 0.806 - - 0.882 - - -
10. wdr47b ENSDARG00000099757 93 1.662 - - 0.847 - - 0.815 - - - WD repeat domain 47b [Source:ZFIN;Acc:ZDB-GENE-121114-10]
11. C1H20orf27 C1H20orf27 69 1.623 - - - - - 0.857 0.766 - -
12. fasn_1 ENSDARG00000087657 31 1.511 - - - - - 0.800 - - 0.711 fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
13. PRRT4 ENSDARG00000088343 36 1.431 - - - - - 0.722 - - 0.709 proline-rich transmembrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-140106-210]
14. si:ch211-152l15.4 si:ch211-152l15.4 13 1.408 - - - - 0.705 - 0.703 - -
15. top1 ENSDARG00000086775 8 1 - - - - 1.000 - - - - DNA topoisomerase I [Source:ZFIN;Acc:ZDB-GENE-030131-5390]
16. si:ch211-202n12.2 ENSDARG00000096665 4 1 - - - - 1.000 - - - - si:ch211-202n12.2 [Source:ZFIN;Acc:ZDB-GENE-121214-12]
17. si:dkey-283b1.7 ENSDARG00000053460 10 1 - - - - 1.000 - - - - si:dkey-283b1.7 [Source:ZFIN;Acc:ZDB-GENE-120215-126]
18. CU856140.1 CU856140.1 4316 1 - - - - 1.000 - - - -
19. si:ch211-209j10.6 ENSDARG00000093317 126 1 - - - - 1.000 - - - - si:ch211-209j10.6 [Source:ZFIN;Acc:ZDB-GENE-090311-44]
20. CD37 ENSDARG00000075515, ENSDARG00000111538 11 1 - - - - 1.000 - - - - CD37 molecule [Source:ZFIN;Acc:ZDB-GENE-070820-17]
21. cryabb ENSDARG00000101380, ENSDARG00000109545 8 1 - - - - 1.000 - - - - crystallin, alpha B, b [Source:ZFIN;Acc:ZDB-GENE-040718-419]
22. CABZ01041804.1 CABZ01041804.1 312 0.997 - - 0.997 - - - - - -
23. CLEC17A CLEC17A 42 0.992 - - 0.992 - - - - - -
24. si:ch211-218o21.4 ENSDARG00000079869 4 0.99 - - 0.990 - - - - - - si:ch211-218o21.4 [Source:ZFIN;Acc:ZDB-GENE-081104-178]
25. grapb ENSDARG00000022668 6 0.99 - - 0.990 - - - - - - GRB2 related adaptor protein b [Source:ZFIN;Acc:ZDB-GENE-050913-4]
26. LRTM1 ENSDARG00000098742 21 0.99 - - 0.990 - - - - - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
27. serpinb1l2 ENSDARG00000070396 37 0.99 - - 0.990 - - - - - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041001-117]
28. spaw ENSDARG00000014309 4 0.99 - - 0.990 - - - - - - southpaw [Source:ZFIN;Acc:ZDB-GENE-030219-1]
29. cyp2ae1 ENSDARG00000013524 14 0.99 - - 0.990 - - - - - - cytochrome P450, family 2, subfamily AE, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-090312-107]
30. htr1fa ENSDARG00000002773, ENSDARG00000109862 38 0.99 - - 0.990 - - - - - - 5-hydroxytryptamine (serotonin) receptor 1Fa [Source:ZFIN;Acc:ZDB-GENE-081105-125]
31. si:ch211-152n14.4 si:ch211-152n14.4 4 0.99 - - 0.990 - - - - - -
32. PEG3_35 PEG3_35 52 0.989 - - 0.989 - - - - - -
33. si:ch211-105d18.8 si:ch211-105d18.8 38 0.989 - - 0.989 - - - - - -
34. prodha ENSDARG00000086746 10 0.989 - - 0.989 - - - - - - proline dehydrogenase (oxidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041008-73]
35. CABZ01113374.2 CABZ01113374.2 27 0.988 - - 0.988 - - - - - -
36. erbb4a ENSDARG00000063207 55 0.987 - - - - - 0.987 - - - erb-b2 receptor tyrosine kinase 4a [Source:ZFIN;Acc:ZDB-GENE-030918-4]
37. ROCK2 ROCK2 8 0.987 - - 0.987 - - - - - -
38. pcmtd2 ENSDARG00000053820, ENSDARG00000113456 59 0.985 - - 0.985 - - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
39. npy ENSDARG00000036222 14 0.985 - - 0.985 - - - - - - neuropeptide Y [Source:ZFIN;Acc:ZDB-GENE-980526-438]
40. fam26f 595 0.984 - - 0.984 - - - - - - family with sequence similarity 26, member F
41. polm ENSDARG00000103470 49 0.981 - - 0.981 - - - - - - polymerase (DNA directed), mu [Source:ZFIN;Acc:ZDB-GENE-040426-911]
42. adra2c ENSDARG00000069669, ENSDARG00000109788, ENSDARG00000110072 61 0.981 - - - - - 0.981 - - - adrenoceptor alpha 2C [Source:ZFIN;Acc:ZDB-GENE-021010-3]
43. tmigd1 ENSDARG00000007040 19 0.981 - - - - - - 0.981 - - transmembrane and immunoglobulin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-080303-6]
44. GTF3A GTF3A 6 0.98 - - 0.980 - - - - - -
45. zgc:162184 ENSDARG00000077217 47 0.98 - - 0.980 - - - - - - zgc:162184 [Source:ZFIN;Acc:ZDB-GENE-070424-83]
46. LRRC4C ENSDARG00000113411 36 0.978 - - - - - 0.978 - - - leucine rich repeat containing 4C [Source:ZFIN;Acc:ZDB-GENE-050522-533]
47. FP074874.1 ENSDARG00000102679 40 0.975 - - 0.975 - - - - - - si:ch73-158p21.7 [Source:NCBI gene;Acc:100331388]
48. matn1 ENSDARG00000030215 11 0.974 - - 0.974 - - - - - - matrilin 1 [Source:ZFIN;Acc:ZDB-GENE-050307-3]
49. lrch4 ENSDARG00000068258 24 0.972 - - 0.972 - - - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
50. SLC37A4 SLC37A4 10 0.969 - - - - - 0.969 - - -
51. si:dkey-29b11.3 ENSDARG00000087388 29 0.968 - - 0.968 - - - - - - si:dkey-29b11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-178]
52. dnm1a ENSDARG00000010042 43 0.967 - - - - - 0.967 - - - dynamin 1a [Source:ZFIN;Acc:ZDB-GENE-081104-27]
53. thsd7a thsd7a 194 0.964 - - - - - 0.964 - - -
54. sf3b3 ENSDARG00000103553 57 0.962 - - 0.962 - - - - - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
55. cuedc1a ENSDARG00000068716 232 0.96 - - - - - 0.960 - - - CUE domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061027-344]
56. rmi1 ENSDARG00000041376 674 0.958 - - - - - 0.958 - - - RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-829]
57. c1qtnf5 ENSDARG00000056134 729 0.958 - - 0.958 - - - - - - C1q and TNF related 5 [Source:ZFIN;Acc:ZDB-GENE-050706-101]
58. si:ch73-287n15.1 si:ch73-287n15.1 20 0.958 - - - - - 0.958 - - -
59. map3k4 ENSDARG00000104835 34 0.956 - - 0.956 - - - - - - mitogen-activated protein kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-990603-4]
60. bai3 bai3 92 0.955 - - - - - 0.955 - - -
61. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 0.954 - - 0.954 - - - - - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
62. zgc:165481 ENSDARG00000060092 95 0.952 - - 0.952 - - - - - - zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
63. capn1b ENSDARG00000052748, ENSDARG00000117045 320 0.95 - - - - - 0.950 - - - calpain 1, (mu/I) large subunit b [Source:ZFIN;Acc:ZDB-GENE-060503-491]
64. rnf41l ENSDARG00000073918 329 0.949 - - 0.949 - - - - - - ring finger protein 41, like [Source:ZFIN;Acc:ZDB-GENE-030131-9441]
65. ZNF784_4 ZNF784_4 113 0.949 - - - - - - 0.949 - -
66. ubxn10 ENSDARG00000052535 24 0.947 - - 0.947 - - - - - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
67. BX957322.2 ENSDARG00000095302 68 0.945 - - - - - 0.945 - - -
68. si:dkeyp-4f2.2 si:dkeyp-4f2.2 53 0.945 - - 0.945 - - - - - -
69. ccdc153 ENSDARG00000077161 93 0.942 - - - - - 0.942 - - - coiled-coil domain containing 153 [Source:ZFIN;Acc:ZDB-GENE-080204-16]
70. sez6l ENSDARG00000100594 35 0.941 - - - - - 0.941 - - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
71. MAN1B1 MAN1B1 47 0.941 - - - - - 0.941 - - -
72. grapa ENSDARG00000005414 29 0.941 - - - - - 0.941 - - - GRB2 related adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-050522-347]
73. galk2 ENSDARG00000004059 122 0.939 - - - - - 0.939 - - - galactokinase 2 [Source:ZFIN;Acc:ZDB-GENE-041114-143]
74. si:dkey-253a1.2 si:dkey-253a1.2 52 0.939 - - - - - 0.939 - - -
75. cspg5b ENSDARG00000099793 67 0.938 - - - - - 0.938 - - - chondroitin sulfate proteoglycan 5b [Source:ZFIN;Acc:ZDB-GENE-060503-368]
76. ankk1 ENSDARG00000056921 119 0.938 - - - - - 0.938 - - - ankyrin repeat and kinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071015-4]
77. galnt13 ENSDARG00000099227 1059 0.938 - - - - - 0.938 - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 [Source:ZFIN;Acc:ZDB-GENE-091204-444]
78. BX546499.2 ENSDARG00000093947 26 0.938 - - - - - 0.938 - - -
79. hcfc1a ENSDARG00000015990, ENSDARG00000111404 59 0.938 - - 0.938 - - - - - - host cell factor C1a [Source:ZFIN;Acc:ZDB-GENE-030912-10]
80. snx8b ENSDARG00000078057 15 0.938 - - - - - 0.938 - - - sorting nexin 8b [Source:ZFIN;Acc:ZDB-GENE-090313-317]
81. vps13d ENSDARG00000017986 183 0.935 - - 0.935 - - - - - - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
82. TMEM151A ENSDARG00000077986 78 0.931 - - - - - 0.931 - - - transmembrane protein 151A [Source:HGNC Symbol;Acc:HGNC:28497]
83. prdm13 ENSDARG00000078701 205 0.931 - - - - - 0.931 - - - PR domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-080616-1]
84. mapk9 ENSDARG00000077364 38 0.93 - - - - - 0.930 - - - mitogen-activated protein kinase 9 [Source:ZFIN;Acc:ZDB-GENE-091117-28]
85. nmu ENSDARG00000043299 67 0.93 - - - - - 0.930 - - - neuromedin U [Source:ZFIN;Acc:ZDB-GENE-041001-111]
86. BX005294.2 ENSDARG00000109361 3 0.93 - - - - - 0.930 - - -
87. barhl1b ENSDARG00000019013, ENSDARG00000113145 101 0.93 - - - - - 0.930 - - - BarH-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-060118-2]
88. ACSL6 12 0.93 - - - - - 0.930 - - - acyl-CoA synthetase long-chain family member 6
89. trim9 ENSDARG00000039123 53 0.93 - - - - - 0.930 - - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
90. prepl ENSDARG00000017853, ENSDARG00000114415 4 0.93 - - - - - 0.930 - - - prolyl endopeptidase like [Source:ZFIN;Acc:ZDB-GENE-090313-224]
91. skor1a ENSDARG00000069030 19 0.93 - - - - - 0.930 - - - SKI family transcriptional corepressor 1a [Source:ZFIN;Acc:ZDB-GENE-080722-5]
92. si:ch211-207c7.6 si:ch211-207c7.6 23 0.93 - - - - - 0.930 - - -
93. nr1d4a ENSDARG00000031161 24 0.93 - - - - - 0.930 - - - nuclear receptor subfamily 1, group D, member 4a [Source:ZFIN;Acc:ZDB-GENE-080403-5]
94. npy4r ENSDARG00000043341, ENSDARG00000113787 1 0.93 - - - - - 0.930 - - - neuropeptide Y receptor Y4 [Source:ZFIN;Acc:ZDB-GENE-980526-393]
95. si:dkeyp-33c10.5 11 0.93 - - - - - 0.930 - - - si:dkeyp-33c10.5, transcript variant X2
96. zgc:165582 ENSDARG00000074362 198 0.93 - - - - - 0.930 - - - zgc:165582 [Source:ZFIN;Acc:ZDB-GENE-070820-9]
97. GPR114 GPR114 1 0.93 - - - - - 0.930 - - -
98. RIC3_1 ENSDARG00000105549 2 0.93 - - - - - 0.930 - - - RIC3 acetylcholine receptor chaperone [Source:HGNC Symbol;Acc:HGNC:30338]
99. BX323448.1 ENSDARG00000116236 10 0.93 - - - - - 0.930 - - -
100. ZNF337_16 ZNF337_16 22 0.93 - - - - - 0.930 - - -

There are 913 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA