Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-250m6.4

Gene Name Gene ID Reads Annotation
si:ch211-250m6.4 ENSDARG00000068869, ENSDARG00000116106 1 si:ch211-250m6.4 [Source:ZFIN;Acc:ZDB-GENE-061009-21]










Genes with expression patterns similar to si:ch211-250m6.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-250m6.4 ENSDARG00000068869, ENSDARG00000116106 1 2 - - - - 1.000 1.000 - - - si:ch211-250m6.4 [Source:ZFIN;Acc:ZDB-GENE-061009-21]
2. sox32 ENSDARG00000100591 2 2 - - - - 1.000 1.000 - - - SRY (sex determining region Y)-box 32 [Source:ZFIN;Acc:ZDB-GENE-011026-1]
3. tlr5a ENSDARG00000044415 3 2 - - - - 1.000 1.000 - - - toll-like receptor 5a [Source:ZFIN;Acc:ZDB-GENE-040219-14]
4. CABZ01033205.2 CABZ01033205.2 5 1.746 - - - - 0.746 1.000 - - -
5. cel.1 ENSDARG00000017490 4 1.737 - - - - 1.000 0.737 - - - carboxyl ester lipase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1201]
6. si:ch73-68b22.2 ENSDARG00000094609 18 1.733 - - - - 0.837 0.896 - - - si:ch73-68b22.2 [Source:ZFIN;Acc:ZDB-GENE-091204-355]
7. CU694952.2 CU694952.2 3 1 - - - - - 1.000 - - -
8. olig1 ENSDARG00000040948 1 1 - - - - 1.000 - - - - oligodendrocyte transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050107-2]
9. plp1b ENSDARG00000011929 8 1 - - - - 1.000 - - - - proteolipid protein 1b [Source:ZFIN;Acc:ZDB-GENE-030710-6]
10. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 1 - - - - - 1.000 - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
11. si:dkey-222o15.3 si:dkey-222o15.3 3 1 - - - - 1.000 - - - -
12. ZNF70_9 ZNF70_9 1 1 - - - - - 1.000 - - -
13. ccdc170 ENSDARG00000016161 18 1 - - - - - 1.000 - - - coiled-coil domain containing 170 [Source:ZFIN;Acc:ZDB-GENE-070112-162]
14. SNORA53 SNORA53 10 1 - - - - 1.000 - - - -
15. MLF1IP MLF1IP 15 1 - - - - 1.000 - - - -
16. BX000999.1 BX000999.1 0 1 - - - - 1.000 - - - -
17. amy2a ENSDARG00000013856 13 1 - - - - 1.000 - - - - amylase, alpha 2A (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040426-2393]
18. GPRIN1 10 1 - - - - 1.000 - - - - G protein regulated inducer of neurite outgrowth 1
19. zgc:152658 ENSDARG00000018587, ENSDARG00000111314 2 1 - - - - 1.000 - - - - zgc:152658 [Source:ZFIN;Acc:ZDB-GENE-060929-68]
20. lhx8b ENSDARG00000042145 0 1 - - - - 1.000 - - - - LIM homeobox 8b [Source:ZFIN;Acc:ZDB-GENE-081105-153]
21. map3k9 ENSDARG00000013491 1 1 - - - - 1.000 - - - - mitogen-activated protein kinase kinase kinase 9 [Source:ZFIN;Acc:ZDB-GENE-081113-5]
22. CABZ01049362.1 ENSDARG00000099508 570 1 - - - - - 1.000 - - -
23. avp ENSDARG00000058567 4 1 - - - - 1.000 - - - - arginine vasopressin [Source:ZFIN;Acc:ZDB-GENE-030407-2]
24. zgc:158345 2 1 - - - - 1.000 - - - - zgc:158345
25. ADAMTS15_1 ADAMTS15_1 11 1 - - - - - 1.000 - - -
26. f8 ENSDARG00000101385 1 1 - - - - - 1.000 - - - coagulation factor VIII, procoagulant component [Source:ZFIN;Acc:ZDB-GENE-090629-2]
27. U1_12 U1_12 0 1 - - - - 1.000 - - - -
28. SYCP2L 3 1 - - - - 1.000 - - - - synaptonemal complex protein 2-like, transcript variant X3
29. chd3 ENSDARG00000021405, ENSDARG00000115235 17 1 - - - - 1.000 - - - - chromodomain helicase DNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-121031-4]
30. CABZ01075242.1 ENSDARG00000114227 9 1 - - - - 1.000 - - - -
31. si:ch211-155d24.7 si:ch211-155d24.7 17 1 - - - - - 1.000 - - -
32. ctc1 ENSDARG00000070119 8 1 - - - - - 1.000 - - - CTS telomere maintenance complex component 1 [Source:ZFIN;Acc:ZDB-GENE-061103-271]
33. sema4aa ENSDARG00000077103 4 1 - - - - - 1.000 - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Aa [Source:ZFIN;Acc:ZDB-GENE-110411-86]
34. si:dkeyp-85d8.4 si:dkeyp-85d8.4 1 1 - - - - 1.000 - - - -
35. si:dkey-20i20.10 ENSDARG00000095455 3 1 - - - - 1.000 - - - - si:dkey-20i20.10 [Source:ZFIN;Acc:ZDB-GENE-060503-905]
36. Metazoa_SRP_26 Metazoa_SRP_26 0 1 - - - - 1.000 - - - -
37. prom1b ENSDARG00000034007, ENSDARG00000111216, ENSDARG00000111262 14 1 - - - - - 1.000 - - - prominin 1 b [Source:ZFIN;Acc:ZDB-GENE-031003-1]
38. EBF3 EBF3 16 1 - - - - - 1.000 - - -
39. im:7151068 im:7151068 2 1 - - - - 1.000 - - - -
40. eef1a2 ENSDARG00000006838, ENSDARG00000111569 2 1 - - - - 1.000 - - - - eukaryotic translation elongation factor 1 alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040718-64]
41. si:ch211-209l18.5 si:ch211-209l18.5 1 1 - - - - - 1.000 - - -
42. si:rp71-31c2.1 si:rp71-31c2.1 1 1 - - - - - 1.000 - - -
43. si:ch211-13k12.1 si:ch211-13k12.1 25 1 - - - - 1.000 - - - -
44. si:dkey-11o18.5 ENSDARG00000087633 3 1 - - - - 1.000 - - - - si:dkey-11o18.5 [Source:ZFIN;Acc:ZDB-GENE-091204-110]
45. ipp ENSDARG00000075339 3 1 - - - - - 1.000 - - - intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]
46. srd5a3 ENSDARG00000043307 142 1 - - - - - 1.000 - - - steroid 5 alpha-reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7915]
47. wdr21 ENSDARG00000003197, ENSDARG00000110654 4 1 - - - - - 1.000 - - - WD repeat domain 21 [Source:ZFIN;Acc:ZDB-GENE-040109-2]
48. CABZ01088691.2 CABZ01088691.2 0 1 - - - - 1.000 - - - -
49. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1 - - - - - 1.000 - - - potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
50. BX927253.1 ENSDARG00000096072 1 1 - - - - 1.000 - - - -
51. crhb ENSDARG00000027657 9 1 - - - - - 1.000 - - - corticotropin releasing hormone b [Source:ZFIN;Acc:ZDB-GENE-041114-75]
52. si:ch211-262h13.4 si:ch211-262h13.4 3 1 - - - - 1.000 - - - -
53. si:ch73-285p12.4 ENSDARG00000054548 1 1 - - - - - 1.000 - - - si:ch73-285p12.4 [Source:ZFIN;Acc:ZDB-GENE-110411-145]
54. fgl2 fgl2 9 1 - - - - 1.000 - - - -
55. fam19a1 7 1 - - - - - 1.000 - - - family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
56. DTX4_1 ENSDARG00000076302 31 1 - - - - - 1.000 - - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
57. si:ch211-57m13.1 ENSDARG00000095927 1 1 - - - - 1.000 - - - - si:ch211-57m13.1 [Source:ZFIN;Acc:ZDB-GENE-090312-43]
58. apnl ENSDARG00000090900 21 1 - - - - - 1.000 - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
59. si:ch211-238g23.1 ENSDARG00000055746 23 1 - - - - - 1.000 - - - si:ch211-238g23.1 [Source:ZFIN;Acc:ZDB-GENE-050420-173]
60. PLA2G4C_2 PLA2G4C_2 10 1 - - - - 1.000 - - - -
61. si:ch211-199m9.3 50 1 - - - - 1.000 - - - - si:ch211-199m9.3, transcript variant X3
62. si:dkey-92j12.5 ENSDARG00000094677 5 1 - - - - 1.000 - - - - si:dkey-92j12.5 [Source:ZFIN;Acc:ZDB-GENE-090313-354]
63. DNAI1 DNAI1 11 1 - - - - 1.000 - - - -
64. slc38a3a ENSDARG00000027065, ENSDARG00000112018 95 1 - - - - - 1.000 - - - solute carrier family 38, member 3a [Source:ZFIN;Acc:ZDB-GENE-070615-25]
65. si:ch1073-111a5.3 si:ch1073-111a5.3 0 1 - - - - 1.000 - - - -
66. gdf6b ENSDARG00000005510 106 1 - - - - - 1.000 - - - growth differentiation factor 6b [Source:ZFIN;Acc:ZDB-GENE-980526-442]
67. si:ch211-229l10.11 ENSDARG00000101223 3 1 - - - - 1.000 - - - - si:ch211-229l10.11 [Source:ZFIN;Acc:ZDB-GENE-110913-131]
68. CTRL ENSDARG00000068680 1 1 - - - - 1.000 - - - - chymotrypsin-like [Source:ZFIN;Acc:ZDB-GENE-040912-147]
69. Metazoa_SRP_13 Metazoa_SRP_13 7 1 - - - - - 1.000 - - -
70. CABZ01079979.1 CABZ01079979.1 1 1 - - - - 1.000 - - - -
71. irx4a ENSDARG00000035648 71 1 - - - - - 1.000 - - - iroquois homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1825]
72. TRIM35 TRIM35 100 1 - - - - 1.000 - - - -
73. APOBEC2 APOBEC2 9 1 - - - - - 1.000 - - -
74. BX120005.1 ENSDARG00000089327 1 1 - - - - - 1.000 - - - cytotoxic and regulatory T-cell molecule [Source:NCBI gene;Acc:101884219]
75. fut7 ENSDARG00000044775 25 1 - - - - - 1.000 - - - fucosyltransferase 7 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-997]
76. soul5l ENSDARG00000089879 20 1 - - - - - 1.000 - - - heme-binding protein soul5, like [Source:ZFIN;Acc:ZDB-GENE-121214-315]
77. CABZ01061914.2 CABZ01061914.2 2 1 - - - - - 1.000 - - -
78. pdca ENSDARG00000011886 1 1 - - - - - 1.000 - - - phosducin a [Source:ZFIN;Acc:ZDB-GENE-031023-1]
79. tbc1d20 ENSDARG00000032298 1 1 - - - - 1.000 - - - - TBC1 domain family, member 20 [Source:ZFIN;Acc:ZDB-GENE-050626-61]
80. FNDC3B FNDC3B 2 1 - - - - - 1.000 - - -
81. CR558302.1 ENSDARG00000115782 0 1 - - - - 1.000 - - - -
82. si:ch211-125e6.6 si:ch211-125e6.6 0 1 - - - - 1.000 - - - -
83. GPR20 ENSDARG00000077427 1 1 - - - - - 1.000 - - - G protein-coupled receptor 20 [Source:ZFIN;Acc:ZDB-GENE-140106-136]
84. hsd3b1 ENSDARG00000069926 35 1 - - - - - 1.000 - - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-081105-30]
85. sebox ENSDARG00000042526 2 1 - - - - 1.000 - - - - SEBOX homeobox [Source:ZFIN;Acc:ZDB-GENE-021206-4]
86. arl10 37 1 - - - - 1.000 - - - - ADP-ribosylation factor-like 10
87. RBBP6_12 RBBP6_12 0 1 - - - - 1.000 - - - -
88. si:dkey-15f23.2 si:dkey-15f23.2 2 1 - - - - 1.000 - - - -
89. trpm3 ENSDARG00000039181 2 1 - - - - - 1.000 - - - transient receptor potential cation channel, subfamily M, member 3 [Source:ZFIN;Acc:ZDB-GENE-060531-95]
90. si:dkey-256i11.4 si:dkey-256i11.4 3 1 - - - - - 1.000 - - -
91. CABZ01080134.1 CABZ01080134.1 2 1 - - - - 1.000 - - - -
92. si:ch211-73m21.1 ENSDARG00000096491 10 1 - - - - 1.000 - - - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]
93. agt ENSDARG00000016412 17 1 - - - - - 1.000 - - - angiotensinogen [Source:ZFIN;Acc:ZDB-GENE-030131-1205]
94. CABZ01039424.1 CABZ01039424.1 15 1 - - - - 1.000 - - - -
95. ighv8-3 ENSDARG00000114819 0 1 - - - - 1.000 - - - - immunoglobulin heavy variable 8-3 [Source:ZFIN;Acc:ZDB-GENE-040514-28]
96. si:ch73-289h5.4 ENSDARG00000077488 0 1 - - - - 1.000 - - - - si:ch73-289h5.4 [Source:ZFIN;Acc:ZDB-GENE-110913-10]
97. sema3bl ENSDARG00000007560, ENSDARG00000110211 30 1 - - - - - 1.000 - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl [Source:ZFIN;Acc:ZDB-GENE-030131-2956]
98. si:dkey-208k4.7 si:dkey-208k4.7 14 1 - - - - - 1.000 - - -
99. adrb1_1 ENSDARG00000007490, ENSDARG00000115574 9 1 - - - - - 1.000 - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
100. gphb5 ENSDARG00000027472 8 1 - - - - - 1.000 - - - glycoprotein hormone beta 5 [Source:ZFIN;Acc:ZDB-GENE-090319-4]

There are 282 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA