Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-245n8.4

Gene Name Gene ID Reads Annotation
si:ch211-245n8.4 ENSDARG00000096222 230 si:ch211-245n8.4 [Source:ZFIN;Acc:ZDB-GENE-110914-56]










Genes with expression patterns similar to si:ch211-245n8.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-245n8.4 ENSDARG00000096222 230 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-245n8.4 [Source:ZFIN;Acc:ZDB-GENE-110914-56]
2. CABZ01081748.1 ENSDARG00000102139 31 1.644 0.801 0.843 - - - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
3. zgc:163077 ENSDARG00000101593 60 1.634 0.801 - - - - 0.833 - - - zgc:163077 [Source:ZFIN;Acc:ZDB-GENE-070521-6]
4. abhd5a 130 1.622 - 0.895 - - 0.727 - - - - abhydrolase domain containing 5a, transcript variant X1
5. kdelc1 ENSDARG00000031971, ENSDARG00000109619, ENSDARG00000112803 249 1.609 - 0.747 - - - 0.862 - - - KDEL (Lys-Asp-Glu-Leu) containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-878]
6. RPS11 ENSDARG00000053058 32 1.607 0.801 - - - - - - 0.806 - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
7. C3AR1 18 1.605 0.801 - - - - - 0.804 - - C3a anaphylatoxin chemotactic receptor
8. si:dkey-9i23.6 ENSDARG00000094678 58 1.599 0.801 - - - - - 0.798 - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
9. ca4b ENSDARG00000042293 5 1.591 0.801 0.790 - - - - - - - carbonic anhydrase IV b [Source:ZFIN;Acc:ZDB-GENE-080815-5]
10. cratb ENSDARG00000098782 705 1.587 - 0.737 - - - - - 0.850 - carnitine O-acetyltransferase b [Source:ZFIN;Acc:ZDB-GENE-040912-162]
11. CABZ01064968.2 CABZ01064968.2 20 1.58 0.801 - - - - - 0.779 - -
12. b4galt2 ENSDARG00000077994 480 1.576 0.739 0.837 - - - - - - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-070912-258]
13. RD3L RD3L 15 1.571 - - - - - - 0.767 0.804 -
14. si:ch73-155e10.1 si:ch73-155e10.1 13 1.568 0.801 - - - - - 0.767 - -
15. urod ENSDARG00000006818 856 1.56 - - - - - 0.844 0.716 - - uroporphyrinogen decarboxylase [Source:ZFIN;Acc:ZDB-GENE-000208-18]
16. HIST1H2BA_1 ENSDARG00000116654 37 1.557 - 0.790 - - - - 0.767 - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
17. zgc:113411 ENSDARG00000038133, ENSDARG00000112781 68 1.554 - 0.725 - - - - - 0.829 - zgc:113411 [Source:ZFIN;Acc:ZDB-GENE-050417-474]
18. wdr35 ENSDARG00000069269 492 1.55 - 0.759 - - - - - 0.791 - WD repeat domain 35 [Source:ZFIN;Acc:ZDB-GENE-060810-148]
19. LRRC45 ENSDARG00000014005 140 1.55 - - - - - - 0.709 0.841 - leucine rich repeat containing 45 [Source:ZFIN;Acc:ZDB-GENE-121214-317]
20. cyp2aa2 ENSDARG00000104811 77 1.546 0.801 - - - - - 0.745 - - y cytochrome P450, family 2, subfamily AA, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061027-232]
21. syne2a 63 1.54 - 0.836 - - - 0.704 - - - spectrin repeat containing, nuclear envelope 2a
22. ftr23 ENSDARG00000067985 254 1.513 - - - - - 0.807 0.706 - - finTRIM family, member 23 [Source:ZFIN;Acc:ZDB-GENE-070912-322]
23. crfb4 ENSDARG00000068711 51 1.506 - 0.786 - - 0.720 - - - - cytokine receptor family member b4 [Source:ZFIN;Acc:ZDB-GENE-070905-3]
24. hist2h3c ENSDARG00000094154 124 1.505 0.716 0.789 - - - - - - - histone cluster 2, H3c [Source:ZFIN;Acc:ZDB-GENE-070424-8]
25. socs8 socs8 128 1.5 - 0.704 - - - 0.796 - - -
26. grk4_1 ENSDARG00000070448 511 1.485 - 0.721 - - - - - 0.764 - G protein-coupled receptor kinase 4 [Source:ZFIN;Acc:ZDB-GENE-060929-1198]
27. slc16a5 slc16a5 173 1.465 - - - - - - 0.717 0.748 -
28. si:ch211-198n5.11 ENSDARG00000054400, ENSDARG00000112640 97 1.449 - - - - - 0.717 0.732 - - si:ch211-198n5.11 [Source:ZFIN;Acc:ZDB-GENE-050411-52]
29. si:dkey-60a16.1 ENSDARG00000037073 163 1.421 0.703 0.718 - - - - - - - si:dkey-60a16.1 [Source:ZFIN;Acc:ZDB-GENE-040724-244]
30. irak4 ENSDARG00000100534 108 0.983 0.983 - - - - - - - - interleukin-1 receptor-associated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-738]
31. si:dkeyp-72e1.9 ENSDARG00000103743 49 0.983 0.983 - - - - - - - - si:dkeyp-72e1.9 [Source:ZFIN;Acc:ZDB-GENE-120215-89]
32. mthfsd ENSDARG00000062042 34 0.963 0.963 - - - - - - - - methenyltetrahydrofolate synthetase domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-3513]
33. KLHL14 ENSDARG00000045275 155 0.963 0.963 - - - - - - - - kelch-like family member 14 [Source:ZFIN;Acc:ZDB-GENE-091204-223]
34. si:ch73-186j5.4 si:ch73-186j5.4 70 0.951 - 0.951 - - - - - - -
35. TRIOBP TRIOBP 92 0.939 0.939 - - - - - - - -
36. rad21b ENSDARG00000035655 87 0.939 0.939 - - - - - - - - RAD21 cohesin complex component b [Source:ZFIN;Acc:ZDB-GENE-060503-223]
37. CU151895.1 CU151895.1 103 0.939 0.939 - - - - - - - -
38. si:dkey-4c15.15 si:dkey-4c15.15 17 0.939 0.939 - - - - - - - -
39. AL840638.1 ENSDARG00000098608 104 0.921 - 0.921 - - - - - - -
40. coro2ba ENSDARG00000079440 420 0.912 0.912 - - - - - - - - coronin, actin binding protein, 2Ba [Source:ZFIN;Acc:ZDB-GENE-050518-1]
41. itsn2a ENSDARG00000000161 115 0.91 - 0.910 - - - - - - - intersectin 2a [Source:ZFIN;Acc:ZDB-GENE-041014-84]
42. MYOF ENSDARG00000006112 436 0.907 0.907 - - - - - - - - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
43. fat3a ENSDARG00000033840 902 0.906 0.906 - - - - - - - - FAT atypical cadherin 3a [Source:ZFIN;Acc:ZDB-GENE-060929-1254]
44. zgc:162183 ENSDARG00000074663, ENSDARG00000116229 403 0.902 - 0.902 - - - - - - - zgc:162183 [Source:ZFIN;Acc:ZDB-GENE-070410-30]
45. ABHD15 ABHD15 86 0.901 - 0.901 - - - - - - -
46. BX571811.1 ENSDARG00000105621 25 0.9 - 0.900 - - - - - - -
47. si:dkeyp-75d2.5 si:dkeyp-75d2.5 21 0.9 - 0.900 - - - - - - -
48. CR391997.1 CR391997.1 62 0.899 - 0.899 - - - - - - -
49. mid2 ENSDARG00000034871 1001 0.895 - 0.895 - - - - - - - midline 2 [Source:ZFIN;Acc:ZDB-GENE-090220-1]
50. xkr7 ENSDARG00000026333 18 0.893 0.893 - - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
51. dock4b ENSDARG00000024874 32 0.893 0.893 - - - - - - - - dedicator of cytokinesis 4b [Source:ZFIN;Acc:ZDB-GENE-060130-74]
52. mob1a_1 ENSDARG00000102320, ENSDARG00000111884, ENSDARG00000116249 91 0.893 - 0.893 - - - - - - - MOB kinase activator 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6506]
53. gtdc2 gtdc2 523 0.885 - 0.885 - - - - - - -
54. si:ch211-165d12.4 ENSDARG00000079353 330 0.883 - 0.883 - - - - - - - si:ch211-165d12.4 [Source:ZFIN;Acc:ZDB-GENE-080303-7]
55. CU457819.3 ENSDARG00000105418 23 0.879 0.879 - - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
56. dars2 ENSDARG00000060861 137 0.878 - 0.878 - - - - - - - aspartyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070912-443]
57. camsap1a ENSDARG00000019208 137 0.877 0.877 - - - - - - - - calmodulin regulated spectrin-associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-060518-4]
58. CPNE4 CPNE4 268 0.877 - 0.877 - - - - - - -
59. sv2 ENSDARG00000091833 22 0.873 - 0.873 - - - - - - - synaptic vesicle glycoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-000607-80]
60. si:dkey-14d8.6 ENSDARG00000045835 72 0.872 0.872 - - - - - - - - si:dkey-14d8.6 [Source:ZFIN;Acc:ZDB-GENE-041210-124]
61. si:dkey-121a11.3 ENSDARG00000071458 118 0.87 0.870 - - - - - - - - si:dkey-121a11.3 [Source:ZFIN;Acc:ZDB-GENE-050208-417]
62. phkg1a ENSDARG00000030604, ENSDARG00000114608 85 0.87 - - - - - - - 0.870 - phosphorylase kinase, gamma 1a (muscle) [Source:ZFIN;Acc:ZDB-GENE-061103-385]
63. si:dkeyp-8h3.9 si:dkeyp-8h3.9 3 0.869 - - - - - - 0.869 - -
64. si:dkey-178e17.3 ENSDARG00000058658 271 0.869 - - - - - - - 0.869 - si:dkey-178e17.3 [Source:ZFIN;Acc:ZDB-GENE-081104-335]
65. fam160b1 ENSDARG00000060168 22 0.869 - - - - - - 0.869 - - family with sequence similarity 160, member B1 [Source:ZFIN;Acc:ZDB-GENE-070424-63]
66. LMAN2L LMAN2L 555 0.868 - 0.868 - - - - - - -
67. map3k5 ENSDARG00000005416, ENSDARG00000114051 177 0.868 - 0.868 - - - - - - - mitogen-activated protein kinase kinase kinase 5 [Source:ZFIN;Acc:ZDB-GENE-030827-3]
68. siae ENSDARG00000040527, ENSDARG00000111850 186 0.868 - - - - - - 0.868 - - sialic acid acetylesterase [Source:ZFIN;Acc:ZDB-GENE-040426-1032]
69. PPP1R16B ENSDARG00000079860 390 0.867 - 0.867 - - - - - - - protein phosphatase 1, regulatory subunit 16B [Source:ZFIN;Acc:ZDB-GENE-131127-294]
70. nexmifb ENSDARG00000029296 416 0.867 - 0.867 - - - - - - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
71. si:dkey-239i20.4 ENSDARG00000043514, ENSDARG00000114327 178 0.864 - - - - - 0.864 - - - si:dkey-239i20.4 [Source:ZFIN;Acc:ZDB-GENE-030131-2644]
72. gro1 gro1 81 0.864 - 0.864 - - - - - - -
73. ppp1r18 ENSDARG00000071251 31 0.863 - 0.863 - - - - - - - protein phosphatase 1, regulatory subunit 18 [Source:ZFIN;Acc:ZDB-GENE-060503-350]
74. si:dkey-229b18.3 ENSDARG00000095912 568 0.863 - - - - - - - 0.863 - si:dkey-229b18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-6870]
75. SBK1 SBK1 154 0.862 - 0.862 - - - - - - -
76. C14H5orf45 C14H5orf45 83 0.861 - - - - - - - 0.861 -
77. trim47 ENSDARG00000056678 641 0.861 0.861 - - - - - - - - tripartite motif containing 47 [Source:ZFIN;Acc:ZDB-GENE-040426-1000]
78. SAYSD1 SAYSD1 149 0.861 - 0.861 - - - - - - -
79. AL935128.1 AL935128.1 238 0.859 - - - - - 0.859 - - -
80. setd6 ENSDARG00000043986, ENSDARG00000113991 194 0.859 - - - - - - - 0.859 - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
81. angel2 ENSDARG00000016743 322 0.858 - - - - - - - 0.858 - angel homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6498]
82. ankrd24 ENSDARG00000062103 70 0.858 - - - - - 0.858 - - - ankyrin repeat domain 24 [Source:ZFIN;Acc:ZDB-GENE-050208-747]
83. celf3b ENSDARG00000006983 171 0.858 - 0.858 - - - - - - - cugbp, Elav-like family member 3b [Source:ZFIN;Acc:ZDB-GENE-110408-50]
84. zgc:171599 ENSDARG00000044847 275 0.856 - 0.856 - - - - - - - zgc:171599 [Source:ZFIN;Acc:ZDB-GENE-080219-33]
85. sorl1 ENSDARG00000013892 13 0.854 - 0.854 - - - - - - - sortilin-related receptor, L(DLR class) A repeats containing [Source:ZFIN;Acc:ZDB-GENE-050208-22]
86. si:dkey-23a17.1 si:dkey-23a17.1 15 0.854 - 0.854 - - - - - - -
87. CABZ01052268.1 CABZ01052268.1 3 0.854 - 0.854 - - - - - - -
88. rangrf ENSDARG00000098786 375 0.853 - 0.853 - - - - - - - RAN guanine nucleotide release factor [Source:ZFIN;Acc:ZDB-GENE-060526-143]
89. spon1b ENSDARG00000023694, ENSDARG00000110889 586 0.85 - 0.850 - - - - - - - spondin 1b [Source:ZFIN;Acc:ZDB-GENE-000427-10]
90. TRHDE_1 TRHDE_1 102 0.849 0.849 - - - - - - - -
91. stk36 ENSDARG00000061095 113 0.849 - - - - - - - 0.849 - serine/threonine kinase 36 (fused homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030912-6]
92. tfr1b_1 ENSDARG00000077372, ENSDARG00000112880 343 0.849 - - - - - - - 0.849 - transferrin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-041220-2]
93. zgc:152863 ENSDARG00000099969 99 0.847 - 0.847 - - - - - - - zgc:152863 [Source:ZFIN;Acc:ZDB-GENE-061103-463]
94. mettl17 ENSDARG00000103889, ENSDARG00000109400 239 0.847 - 0.847 - - - - - - - methyltransferase like 17 [Source:ZFIN;Acc:ZDB-GENE-031118-203]
95. DIP2C DIP2C 222 0.845 - 0.845 - - - - - - -
96. C5H3orf30 C5H3orf30 63 0.845 - 0.845 - - - - - - -
97. TMEM184B TMEM184B 1280 0.845 - - - - - - - 0.845 -
98. SH2D6 SH2D6 26 0.843 - 0.843 - - - - - - -
99. grapa ENSDARG00000005414 29 0.843 - 0.843 - - - - - - - GRB2 related adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-050522-347]
100. yif1b ENSDARG00000040505 47 0.843 - 0.843 - - - - - - - Yip1 interacting factor homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-16]

There are 970 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA