Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-242b18.1

Gene Name Gene ID Reads Annotation
si:ch211-242b18.1 ENSDARG00000054723 2929 si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]










Genes with expression patterns similar to si:ch211-242b18.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-242b18.1 ENSDARG00000054723 2929 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
2. klhl41b ENSDARG00000006757 10762 3.9 0.826 - - 0.725 0.761 0.727 0.861 - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
3. TMPO TMPO 3264 3.313 0.813 0.911 0.728 - - - 0.861 - -
4. cacng1 cacng1 3118 3.312 0.790 0.861 - - - 0.909 0.752 - -
5. myoz2a ENSDARG00000012311 1373 3.283 0.771 0.845 - - - 0.841 0.826 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
6. txlnbb ENSDARG00000076241 6396 3.276 0.785 0.913 - - - 0.794 0.784 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
7. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 3.273 0.747 0.883 - - - 0.836 0.807 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
8. EHBP1L1 EHBP1L1 2500 3.253 0.800 0.889 0.711 - - - 0.853 - -
9. klhl40a ENSDARG00000039052 2537 3.237 0.716 0.930 - - - 0.786 0.805 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
10. pbxip1a ENSDARG00000071015 4960 3.237 0.734 0.914 0.713 - - - 0.876 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
11. kcnma1a ENSDARG00000079840 2584 3.231 0.821 0.878 - - - 0.744 0.788 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
12. chrna1 ENSDARG00000009021 2931 3.23 0.768 0.863 - - - 0.795 0.804 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
13. gypc ENSDARG00000041546 1487 3.228 0.777 0.904 - - - 0.770 0.777 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
14. PTPLA PTPLA 4044 3.227 0.739 0.811 - - - 0.858 0.819 - -
15. CR392006.1 CR392006.1 1401 3.226 0.777 0.833 - - - 0.792 0.824 - -
16. myod1 ENSDARG00000030110 6019 3.225 0.780 0.865 - - - 0.740 0.840 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
17. smarcd3a ENSDARG00000038786 2894 3.213 0.724 0.899 - - - 0.796 0.794 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3a [Source:ZFIN;Acc:ZDB-GENE-070912-491]
18. NRAP ENSDARG00000009341 3565 3.2 0.792 0.800 - - - 0.767 0.841 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
19. vwde ENSDARG00000103443 5758 3.186 0.763 0.840 - - - 0.735 0.848 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
20. MYOT ENSDARG00000076312 1791 3.186 0.746 0.856 - - - 0.751 0.833 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
21. mtdhb ENSDARG00000004939 1225 3.173 0.809 0.799 - - - 0.747 0.818 - - metadherin b [Source:ZFIN;Acc:ZDB-GENE-090929-2]
22. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 3.13 0.730 0.813 - - - 0.819 0.768 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
23. FHOD3_1 FHOD3_1 983 3.108 0.734 0.882 - 0.702 - - 0.790 - -
24. prx ENSDARG00000017246 6183 3.108 0.757 0.792 0.707 - - - 0.852 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
25. fbp2 ENSDARG00000012366 1042 3.059 0.728 0.786 - - - 0.728 0.817 - - fructose-1,6-bisphosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040822-23]
26. dhrs7c dhrs7c 1173 3.053 - 0.707 - - - 0.784 0.840 0.722 -
27. C13H10orf71 3489 2.602 0.837 0.907 - - - - 0.858 - - chromosome 13 C10orf71 homolog
28. sptb ENSDARG00000030490 7128 2.582 0.843 0.871 - - - - 0.868 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
29. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 2.555 - 0.912 - - - 0.759 0.884 - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
30. ryr3 ENSDARG00000071331 6795 2.532 - 0.916 - - - 0.764 0.852 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
31. rp42-pen rp42-pen 3395 2.532 - 0.877 - - - 0.828 0.827 - -
32. ryr1b ENSDARG00000023797 5693 2.495 - 0.930 0.704 - - - 0.861 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
33. sh3bgr ENSDARG00000021633 3498 2.489 - 0.832 - - - 0.824 0.833 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
34. hapln1a ENSDARG00000089769 12334 2.489 0.805 0.877 - - - - 0.807 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
35. DNAJA4 ENSDARG00000051762 5657 2.483 - 0.825 - - - 0.821 0.837 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
36. lpl ENSDARG00000087697 2578 2.477 - 0.829 - - - 0.778 0.870 - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
37. srl ENSDARG00000104587 11126 2.471 0.710 0.882 - - - - 0.879 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
38. fitm1 ENSDARG00000056464 1759 2.467 0.773 0.916 - - - - 0.778 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
39. BX294434.1 ENSDARG00000061272 6493 2.462 0.753 0.856 - - - - 0.853 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
40. myhc4 ENSDARG00000035438 1322 2.46 - 0.896 - - - 0.709 0.855 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
41. usp2a ENSDARG00000020107 2586 2.455 0.782 - - - - 0.821 0.852 - - ubiquitin specific peptidase 2a [Source:ZFIN;Acc:ZDB-GENE-041212-59]
42. tnnc1b ENSDARG00000037539 13945 2.452 - 0.872 - - 0.742 - 0.838 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
43. xirp2a ENSDARG00000071113 7113 2.447 0.735 0.875 - - - - 0.837 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
44. CU633479.5 ENSDARG00000114818 1815 2.444 0.729 0.891 - - - - 0.824 - -
45. TRIM63 TRIM63 1600 2.44 - 0.803 - - - 0.817 0.820 - -
46. PHB2 PHB2 3755 2.438 0.732 0.923 - - - - 0.783 - -
47. fxr1 ENSDARG00000022968 2831 2.438 0.767 - - - - 0.820 0.851 - - fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
48. cct8 ENSDARG00000008243 6843 2.437 - 0.832 - - - 0.831 0.774 - - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
49. obsl1b ENSDARG00000077388 2511 2.435 0.864 0.816 - - - - 0.755 - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
50. limch1a ENSDARG00000074275 2981 2.433 - 0.866 - - - 0.731 0.836 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
51. pygma ENSDARG00000055518 15972 2.43 0.755 0.862 - - - - 0.813 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
52. hhatla ENSDARG00000039051 6598 2.427 - 0.875 - - 0.713 - 0.839 - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
53. nexn ENSDARG00000057317 10972 2.425 0.731 - - - - 0.835 0.859 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
54. zgc:92518 ENSDARG00000016343 3837 2.423 0.798 - - - - 0.778 0.847 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
55. lrrfip1a ENSDARG00000030012 1263 2.423 - 0.769 - - - 0.786 0.868 - - leucine rich repeat (in FLII) interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-99]
56. txnipb ENSDARG00000070000 2365 2.422 - 0.812 - - - 0.766 0.844 - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
57. ntmt1 ENSDARG00000022399 5779 2.418 - 0.914 - - - 0.723 0.781 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
58. hfe2 4113 2.417 0.771 0.869 - - - 0.777 - - - hemochromatosis type 2
59. zgc:158296 ENSDARG00000070923 3935 2.415 - 0.822 - - - 0.772 0.821 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
60. cfl2 ENSDARG00000014106 8051 2.415 - 0.904 0.790 - - - 0.721 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
61. mafa ENSDARG00000015890 2140 2.405 0.778 - - - - 0.805 0.822 - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]
62. PTP4A3 ENSDARG00000039997 3814 2.402 - 0.827 - - - 0.832 0.743 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
63. vcl vcl 6667 2.398 0.789 0.906 0.703 - - - - - -
64. alpk3a ENSDARG00000078989 1992 2.397 0.720 0.916 - - - - 0.761 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
65. six1b ENSDARG00000026473 1908 2.397 - 0.789 - - - 0.788 0.820 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
66. parvb ENSDARG00000019117 1042 2.395 0.762 - - - - 0.835 0.798 - - parvin, beta [Source:ZFIN;Acc:ZDB-GENE-030131-4411]
67. tns1 tns1 5891 2.394 0.746 0.874 - - - - 0.774 - -
68. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 2.392 0.784 0.849 - - - - 0.759 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
69. srpk3 ENSDARG00000005916 1546 2.391 - 0.884 - - 0.721 - 0.786 - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
70. enah ENSDARG00000032049 1526 2.391 - 0.876 - - - 0.702 0.813 - - enabled homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010323-11]
71. ATP5J_2 ATP5J_2 2381 2.388 0.791 0.768 - - - - 0.829 - -
72. asb5b ENSDARG00000053222 1207 2.384 0.782 0.842 - - - - 0.760 - - ankyrin repeat and SOCS box containing 5b [Source:ZFIN;Acc:ZDB-GENE-050417-271]
73. trdn ENSDARG00000041779 4283 2.38 - 0.834 - - 0.711 - 0.835 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
74. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 2.376 - 0.738 - - - 0.780 0.858 - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
75. stac3 ENSDARG00000098883 1765 2.376 - 0.809 - - - 0.747 0.820 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
76. camk2d2 ENSDARG00000014273 2840 2.363 - 0.797 - - - 0.750 0.816 - - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-277]
77. mybpc2b ENSDARG00000021265 9618 2.361 0.703 0.863 - - - - 0.795 - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
78. sms ENSDARG00000008155 1192 2.361 0.864 0.777 - - - - 0.720 - - spermine synthase [Source:ZFIN;Acc:ZDB-GENE-040625-150]
79. mdh1b ENSDARG00000018008 3196 2.357 - 0.751 - - - 0.763 0.843 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
80. tgm1l1 ENSDARG00000102106 1437 2.356 - 0.920 - - 0.721 - 0.715 - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
81. COL22A1 COL22A1 4473 2.356 0.701 0.833 - - - - 0.822 - -
82. mef2d ENSDARG00000040237 6144 2.352 - 0.876 - - - 0.745 0.731 - - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
83. MUSTN1 MUSTN1 1882 2.351 - 0.807 - - - 0.714 0.830 - -
84. si:ch211-197l9.2 ENSDARG00000078244 655 2.348 0.823 0.776 - - - - 0.749 - - si:ch211-197l9.2 [Source:ZFIN;Acc:ZDB-GENE-091204-369]
85. pfdn2 ENSDARG00000025391, ENSDARG00000110096 3176 2.339 0.754 0.790 - - - 0.795 - - - prefoldin subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060519-27]
86. MYOM3 2720 2.339 0.709 0.842 - - - - 0.788 - - myomesin 3, transcript variant X2
87. macf1 macf1 1862 2.337 0.757 - - - - 0.742 0.838 - -
88. PTGES3L PTGES3L 4801 2.334 0.777 - - - - 0.779 0.778 - -
89. dtnba ENSDARG00000077694 5483 2.333 0.706 0.852 - - - 0.775 - - - dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
90. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 2.329 - - 0.734 - 0.743 - 0.852 - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
91. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 2.322 0.799 0.769 - - - 0.754 - - - calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
92. si:ch211-76m11.11 si:ch211-76m11.11 460 2.321 0.730 0.772 - - - - 0.819 - -
93. flncb ENSDARG00000018820 5595 2.32 0.742 - - - - 0.771 0.807 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
94. sucla2 ENSDARG00000005359 5992 2.318 0.732 0.812 - - - 0.774 - - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
95. CR847973.1 ENSDARG00000115516 8754 2.315 - 0.764 - - - 0.709 0.842 - -
96. ahsa1 ahsa1 2012 2.311 0.816 - - - - 0.707 0.788 - -
97. SPEG SPEG 4017 2.31 - - 0.766 - 0.701 - 0.843 - -
98. myoz2b ENSDARG00000037266 2139 2.308 0.708 0.781 - - - - 0.819 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
99. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 2.306 0.701 0.824 - - - - 0.781 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
100. chchd3 chchd3 4139 2.303 - 0.760 - - - 0.710 0.833 - -

There are 1473 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA