Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-241f4.1

Gene Name Gene ID Reads Annotation
si:ch211-241f4.1 si:ch211-241f4.1 2










Genes with expression patterns similar to si:ch211-241f4.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-241f4.1 si:ch211-241f4.1 2 1 - - - - 1.000 - - - -
2. CU179703.1 CU179703.1 5 1 - - - - 1.000 - - - -
3. hbaa2 ENSDARG00000069735 10 1 - - - - 1.000 - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
4. notchl ENSDARG00000088308 28 1 - - - - 1.000 - - - - notch homolog, like [Source:ZFIN;Acc:ZDB-GENE-070220-2]
5. si:ch211-71m22.3 ENSDARG00000079075 4 1 - - - - 1.000 - - - - si:ch211-71m22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-195]
6. si:dkeyp-13a3.6 3 1 - - - - 1.000 - - - - si:dkeyp-13a3.6
7. nr1d1 ENSDARG00000033160 3 1 - - - - 1.000 - - - - nuclear receptor subfamily 1, group d, member 1 [Source:ZFIN;Acc:ZDB-GENE-050105-1]
8. si:dkey-178e17.1 ENSDARG00000080000 4 1 - - - - 1.000 - - - - si:dkey-178e17.1 [Source:ZFIN;Acc:ZDB-GENE-081104-41]
9. PIAS1 PIAS1 13 0.997 - - - - 0.997 - - - -
10. si:ch211-1f22.17 si:ch211-1f22.17 10 0.995 - - - - 0.995 - - - -
11. FP017279.3 FP017279.3 31 0.995 - - - - 0.995 - - - -
12. si:ch211-105d18.7 si:ch211-105d18.7 6 0.995 - - - - 0.995 - - - -
13. C18H15orf26 C18H15orf26 36 0.994 - - - - 0.994 - - - -
14. U4atac U4atac 47 0.992 - - - - 0.992 - - - -
15. zgc:174704 10 0.989 - - - - 0.989 - - - - zgc:174704, transcript variant X2
16. zgc:172139 ENSDARG00000068830 10 0.988 - - - - 0.988 - - - - zgc:172139 [Source:ZFIN;Acc:ZDB-GENE-080204-49]
17. sez6a ENSDARG00000100876 35 0.988 - - - - 0.988 - - - - seizure related 6 homolog a [Source:ZFIN;Acc:ZDB-GENE-030131-8208]
18. gfra2b ENSDARG00000044015 5 0.988 - - - - 0.988 - - - - GDNF family receptor alpha 2b [Source:ZFIN;Acc:ZDB-GENE-091204-26]
19. BX284672.1 BX284672.1 11 0.987 - - - - 0.987 - - - -
20. si:ch211-39a7.1 ENSDARG00000037427 31 0.979 - - - - 0.979 - - - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
21. si:dkey-8o9.5 si:dkey-8o9.5 6 0.963 - - - - 0.963 - - - -
22. ENSDARG00000095340 ENSDARG00000095340 8 0.958 - - - - 0.958 - - - -
23. BX255895.1 BX255895.1 29 0.957 - - - - 0.957 - - - -
24. rab44 ENSDARG00000028389 27 0.95 - - - - 0.950 - - - - RAB44, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040724-117]
25. jam3a ENSDARG00000114589 630 0.947 - - - - 0.947 - - - - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
26. slc5a8l ENSDARG00000003697, ENSDARG00000110685 69 0.943 - - - - 0.943 - - - - solute carrier family 5 (iodide transporter), member 8-like [Source:ZFIN;Acc:ZDB-GENE-061110-98]
27. rtel1 ENSDARG00000035074 17 0.942 - - - - 0.942 - - - - regulator of telomere elongation helicase 1 [Source:ZFIN;Acc:ZDB-GENE-050306-11]
28. si:ch73-70k4.1 ENSDARG00000075915 69 0.936 - - - - 0.936 - - - - si:ch73-70k4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3788]
29. zgc:194252 ENSDARG00000057142 11 0.934 - - - - 0.934 - - - - zgc:194252 [Source:ZFIN;Acc:ZDB-GENE-081022-86]
30. HTR7 17 0.933 - - - - 0.933 - - - - 5-hydroxytryptamine receptor 7
31. fam166b ENSDARG00000100292 14 0.92 - - - - 0.920 - - - - family with sequence similarity 166, member B [Source:ZFIN;Acc:ZDB-GENE-070209-41]
32. zgc:92249 14 0.919 - - - - 0.919 - - - - zgc:92249
33. amigo3 ENSDARG00000074469 39 0.917 - - - - 0.917 - - - - adhesion molecule with Ig-like domain 3 [Source:ZFIN;Acc:ZDB-GENE-050208-449]
34. nab1a ENSDARG00000042940 26 0.915 - - - - 0.915 - - - - NGFI-A binding protein 1a (EGR1 binding protein 1) [Source:ZFIN;Acc:ZDB-GENE-050208-574]
35. CT573256.1 ENSDARG00000091657 18 0.896 - - - - 0.896 - - - - serine/threonine-protein kinase VRK1-like [Source:NCBI gene;Acc:794952]
36. LRFN5_1 LRFN5_1 96 0.89 - - - - 0.890 - - - -
37. itm1 itm1 32 0.878 - - - - 0.878 - - - -
38. si:dkey-11e23.4 si:dkey-11e23.4 46 0.86 - - - - 0.860 - - - -
39. rab14l ENSDARG00000035188 18 0.847 - - - - 0.847 - - - - RAB14, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-040426-1207]
40. DUSP13_1 DUSP13_1 425 0.839 - - - - 0.839 - - - -
41. si:ch211-117i10.10 si:ch211-117i10.10 18 0.837 - - - - 0.837 - - - -
42. ccdc127a 39 0.825 - - - - 0.825 - - - - coiled-coil domain containing 127a, transcript variant X2
43. ttc25_1 ENSDARG00000058140 32 0.825 - - - - 0.825 - - - - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
44. ptgis ENSDARG00000060094, ENSDARG00000113227 82 0.821 - - - - 0.821 - - - - prostaglandin I2 (prostacyclin) synthase [Source:ZFIN;Acc:ZDB-GENE-070116-1]
45. brd2b ENSDARG00000046087 73 0.814 - - - - 0.814 - - - - bromodomain containing 2b [Source:ZFIN;Acc:ZDB-GENE-070220-1]
46. syt9b ENSDARG00000029239 31 0.814 - - - - 0.814 - - - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
47. SV2B SV2B 208 0.81 - - - - 0.810 - - - -
48. kcnk10b ENSDARG00000045956 43 0.795 - - - - 0.795 - - - - potassium channel, subfamily K, member 10b [Source:ZFIN;Acc:ZDB-GENE-050420-31]
49. cygb2 ENSDARG00000070148, ENSDARG00000109892, ENSDARG00000114471 30 0.795 - - - - 0.795 - - - - cytoglobin 2 [Source:ZFIN;Acc:ZDB-GENE-060920-1]
50. GIPC3 ENSDARG00000053074 182 0.786 - - - - 0.786 - - - - GIPC PDZ domain containing family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-326]
51. MASP1 ENSDARG00000068726 34 0.78 - - - - 0.780 - - - - mannan-binding lectin serine peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-110421-4]
52. ENSDARG00000093467 ENSDARG00000093467 34 0.775 - - - - 0.775 - - - -
53. RABEPK ENSDARG00000112165 112 0.771 - - - - 0.771 - - - - Rab9 effector protein with kelch motifs [Source:ZFIN;Acc:ZDB-GENE-040704-52]
54. cyp46a2 cyp46a2 38 0.763 - - - - 0.763 - - - -
55. mblac2 ENSDARG00000059689 62 0.759 - - - - 0.759 - - - - metallo-beta-lactamase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081104-313]
56. tg ENSDARG00000020084 40 0.758 - - - - 0.758 - - - - thyroglobulin [Source:ZFIN;Acc:ZDB-GENE-030519-1]
57. spdya ENSDARG00000059131 33 0.741 - - - - 0.741 - - - - speedy/RINGO cell cycle regulator family member A [Source:ZFIN;Acc:ZDB-GENE-041010-194]
58. si:dkey-261j4.3 ENSDARG00000035151 156 0.74 - - - - 0.740 - - - - si:dkey-261j4.3 [Source:ZFIN;Acc:ZDB-GENE-060531-124]
59. inppl1b ENSDARG00000001442 41 0.739 - - - - 0.739 - - - - inositol polyphosphate phosphatase-like 1b [Source:ZFIN;Acc:ZDB-GENE-030616-75]
60. ZNF337_9 ZNF337_9 18 0.739 - - - - 0.739 - - - -
61. PDCL3 ENSDARG00000100651 164 0.737 - - - - 0.737 - - - - phosducin like 3 [Source:HGNC Symbol;Acc:HGNC:28860]
62. syngr2b ENSDARG00000104470 111 0.733 - - - - 0.733 - - - - synaptogyrin 2b [Source:ZFIN;Acc:ZDB-GENE-070424-19]
63. erbb4a ENSDARG00000063207 55 0.733 - - - - 0.733 - - - - erb-b2 receptor tyrosine kinase 4a [Source:ZFIN;Acc:ZDB-GENE-030918-4]
64. lrrc15 ENSDARG00000070792, ENSDARG00000110931 124 0.731 - - - - 0.731 - - - - leucine rich repeat containing 15 [Source:ZFIN;Acc:ZDB-GENE-031113-8]
65. KIRREL3 ENSDARG00000115903 206 0.717 - - - - 0.717 - - - - kirre like nephrin family adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:23204]
66. aox1 aox1 14 0.713 - - - - 0.713 - - - -
67. CR762484.2 CR762484.2 42 0.709 - - - - 0.709 - - - -
68. si:ch211-132b12.7 ENSDARG00000068374 30 0.708 - - - - 0.708 - - - - si:ch211-132b12.7 [Source:ZFIN;Acc:ZDB-GENE-050419-250]
69. OSCP1 ENSDARG00000101888 59 0.706 - - - - 0.706 - - - - organic solute carrier partner 1 [Source:HGNC Symbol;Acc:HGNC:29971]
70. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 0.706 - - - - 0.706 - - - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
71. SMPD2 SMPD2 197 0.702 - - - - 0.702 - - - -
72. ECM1 ECM1 87 0.7 - - - - 0.700 - - - -
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA