Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-237c9.3

Gene Name Gene ID Reads Annotation
si:ch211-237c9.3 si:ch211-237c9.3 17










Genes with expression patterns similar to si:ch211-237c9.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-237c9.3 si:ch211-237c9.3 17 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000
2. DNAJC14 ENSDARG00000105398 20 2.567 0.723 1.000 - - - - 0.844 - - DnaJ (Hsp40) homolog, subfamily C, member 14 [Source:ZFIN;Acc:ZDB-GENE-121105-7]
3. GAS2_1 GAS2_1 16 2 - 1.000 - 1.000 - - - - -
4. syt9a ENSDARG00000003994 298 1.991 - 1.000 - - - - 0.991 - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
5. eif2b5 ENSDARG00000074995 8 1.907 0.907 1.000 - - - - - - - eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-5364]
6. CR556708.1 ENSDARG00000100565 6 1.907 0.907 1.000 - - - - - - - uncharacterized LOC110437832 [Source:NCBI gene;Acc:110437832]
7. rnf213b ENSDARG00000103551 63 1.907 0.907 1.000 - - - - - - - ring finger protein 213b [Source:ZFIN;Acc:ZDB-GENE-110822-1]
8. CABZ01038313.1 CABZ01038313.1 79 1.889 - 1.000 - - - - 0.889 - -
9. gphnb ENSDARG00000100851 118 1.883 - 1.000 - - - - 0.883 - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
10. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.858 - 1.000 - - - - 0.858 - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
11. si:dkey-247i3.1 ENSDARG00000076252 11 1.855 - 1.000 - - 0.855 - - - - si:dkey-247i3.1 [Source:ZFIN;Acc:ZDB-GENE-110913-84]
12. calb2a ENSDARG00000041062, ENSDARG00000110220 459 1.846 - 1.000 - - - - 0.846 - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
13. zgc:152951 ENSDARG00000068663, ENSDARG00000113135 22 1.844 - 1.000 - - - - 0.844 - - zgc:152951 [Source:ZFIN;Acc:ZDB-GENE-060929-416]
14. BTBD17 BTBD17 53 1.844 - 1.000 - - - - 0.844 - -
15. kcnj14 ENSDARG00000075914 38 1.844 - 1.000 - - - - 0.844 - - potassium inwardly-rectifying channel, subfamily J, member 14 [Source:ZFIN;Acc:ZDB-GENE-100922-48]
16. vwc2 ENSDARG00000076495 22 1.844 - 1.000 - - - - 0.844 - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
17. TENM2 ENSDARG00000037122 48 1.844 - 1.000 - - - - 0.844 - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
18. SACS ENSDARG00000091042 15 1.844 - 1.000 - - - - 0.844 - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
19. ccdc64 ccdc64 2 1.844 - 1.000 - - - - 0.844 - -
20. SSBP2 ENSDARG00000099727 22 1.844 - 1.000 - - - - 0.844 - - single-stranded DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-197]
21. mir92b 95 1.844 - 1.000 - - - - 0.844 - - microRNA 92b
22. pag1 ENSDARG00000055875 21 1.844 - 1.000 - - - - 0.844 - - phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:ZFIN;Acc:ZDB-GENE-060503-586]
23. lzts1 ENSDARG00000075565 23 1.844 - 1.000 - - - - 0.844 - - leucine zipper, putative tumor suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-431]
24. CU855953.1 CU855953.1 137 1.838 0.907 - - - - - 0.931 - -
25. CABZ01065506.1 CABZ01065506.1 204 1.798 - 1.000 - - - - 0.798 - -
26. nell2b ENSDARG00000062797 854 1.793 - 0.950 - - - - 0.843 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
27. bsk146 ENSDARG00000099069 274 1.792 - 1.000 - - - - 0.792 - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
28. si:dkey-103i16.2 si:dkey-103i16.2 492 1.781 - 1.000 - - - - 0.781 - -
29. rbfox3l rbfox3l 34 1.778 - - - 0.934 - - 0.844 - -
30. zgc:103510 ENSDARG00000027699 13 1.769 0.907 - - - 0.862 - - - - zgc:103510 [Source:ZFIN;Acc:ZDB-GENE-041212-27]
31. rgs5b ENSDARG00000017860 55 1.756 - 1.000 - - 0.756 - - - - regulator of G protein signaling 5b [Source:ZFIN;Acc:ZDB-GENE-050417-359]
32. camta1a ENSDARG00000077428, ENSDARG00000116922 176 1.75 - 1.000 - - - - 0.750 - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
33. PPFIA3 ENSDARG00000077053 310 1.741 - 1.000 - - - - 0.741 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
34. rnf165a ENSDARG00000077906 133 1.735 - - - - 0.735 - 1.000 - - ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
35. npffr1l3 ENSDARG00000010712 18 1.731 1.000 0.731 - - - - - - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
36. dnm1a ENSDARG00000010042 43 1.727 - 0.883 - - - - 0.844 - - dynamin 1a [Source:ZFIN;Acc:ZDB-GENE-081104-27]
37. KCNA2 KCNA2 66 1.71 - 1.000 - - - - 0.710 - -
38. fstl5 ENSDARG00000040198 213 1.71 - 1.000 - - - - 0.710 - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
39. plcd3b ENSDARG00000079572 64 1.706 0.907 - - - - - 0.799 - - phospholipase C, delta 3b [Source:ZFIN;Acc:ZDB-GENE-081222-2]
40. gpr22 gpr22 115 1.702 - 1.000 - - - - 0.702 - -
41. nrcam nrcam 397 1.702 - 1.000 - - - - 0.702 - -
42. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.701 - 0.921 - - - - 0.780 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
43. ltk ENSDARG00000042861, ENSDARG00000116109 76 1.7 - 1.000 - - 0.700 - - - - leukocyte receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030616-115]
44. si:ch211-214c7.4 ENSDARG00000069595 56 1.7 0.856 - - - - - 0.844 - - si:ch211-214c7.4 [Source:ZFIN;Acc:ZDB-GENE-030131-6275]
45. thsd7ba ENSDARG00000095022 231 1.695 - 0.770 - - - - 0.925 - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
46. erap2 ENSDARG00000098618 16 1.685 0.907 - - - - - 0.778 - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
47. C18H19orf47 C18H19orf47 44 1.683 0.839 - - - - - 0.844 - -
48. gria2b ENSDARG00000052765 188 1.677 - 0.950 - - - - 0.727 - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]
49. tmem178b ENSDARG00000006747 173 1.672 - 0.817 - - - - 0.855 - - transmembrane protein 178B [Source:ZFIN;Acc:ZDB-GENE-040718-92]
50. fem1a ENSDARG00000067966 11 1.668 - 0.704 - 0.964 - - - - - fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
51. dpysl5a ENSDARG00000011141 1827 1.665 - 0.797 - - - - 0.868 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
52. zgc:153615 ENSDARG00000038981 105 1.655 0.718 - - - - - 0.937 - - zgc:153615 [Source:ZFIN;Acc:ZDB-GENE-061110-79]
53. sall3b ENSDARG00000057586 982 1.651 - 0.920 - - - - 0.731 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
54. uts1 ENSDARG00000014927 35 1.651 - 0.731 - - 0.920 - - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
55. PEX5L PEX5L 179 1.644 - 0.795 - - - - 0.849 - -
56. foxb1a ENSDARG00000089042 101 1.623 - 0.704 - - - - 0.919 - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
57. parp12a ENSDARG00000042496 82 1.616 0.907 0.709 - - - - - - - poly (ADP-ribose) polymerase family, member 12a [Source:ZFIN;Acc:ZDB-GENE-050419-6]
58. amigo3 ENSDARG00000074469 39 1.612 - 0.896 - - - - 0.716 - - adhesion molecule with Ig-like domain 3 [Source:ZFIN;Acc:ZDB-GENE-050208-449]
59. cadpsb ENSDARG00000070567 458 1.601 - 0.896 - - - - 0.705 - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
60. zgc:194621 ENSDARG00000074696 85 1.579 - 0.774 - - - - 0.805 - - zgc:194621 [Source:ZFIN;Acc:ZDB-GENE-081022-130]
61. phf20a ENSDARG00000002750 90 1.575 - 0.731 - - - - 0.844 - - PHD finger protein 20, a [Source:ZFIN;Acc:ZDB-GENE-070912-270]
62. FAM161A ENSDARG00000089742 41 1.575 - 0.731 - - - - 0.844 - - family with sequence similarity 161, member A [Source:ZFIN;Acc:ZDB-GENE-110310-1]
63. scn1bb ENSDARG00000105003 239 1.573 - 0.766 - - - - 0.807 - - sodium channel, voltage-gated, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-090408-1]
64. SPAG1 SPAG1 44 1.565 0.809 0.756 - - - - - - -
65. cntnap5b ENSDARG00000075189 16 1.557 - 0.713 - - - - 0.844 - - contactin associated protein-like 5b [Source:ZFIN;Acc:ZDB-GENE-070705-209]
66. SNORD18_1 SNORD18_1 5 1.557 - - - - - - 0.844 - 0.713
67. slc2a5 ENSDARG00000077875 5 1.557 - - - - - - 0.844 - 0.713 solute carrier family 2 (facilitated glucose/fructose transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060222-2]
68. sox21b ENSDARG00000008540 1460 1.545 - 0.731 - - - - 0.814 - - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
69. syt12 ENSDARG00000101776 215 1.538 - 0.713 - - - - 0.825 - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
70. dpysl5b ENSDARG00000059311 600 1.519 - 0.816 - - - - 0.703 - - dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
71. fgf12a ENSDARG00000027957 143 1.502 0.741 - - - - - 0.761 - - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
72. dsel dsel 96 1.484 0.773 0.711 - - - - - - -
73. ovca2 ENSDARG00000103748 38 1.468 - 0.709 - - 0.759 - - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
74. pla2g4a pla2g4a 7 1.466 - 0.704 - - - - - - 0.762
75. SPHK1 ENSDARG00000100290 2 1.462 - - 0.749 - - - - - 0.713 sphingosine kinase 1 [Source:HGNC Symbol;Acc:HGNC:11240]
76. thsd7a thsd7a 194 1.455 - 0.751 - - - - 0.704 - -
77. lrrc4.1 ENSDARG00000069402 323 1.449 - 0.704 - - - - 0.745 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
78. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 - 1.000 - - - - - - -
79. CU694254.1 CU694254.1 4 1 - 1.000 - - - - - - -
80. crygm2d10 ENSDARG00000087765 358 1 - 1.000 - - - - - - - crystallin, gamma M2d10 [Source:ZFIN;Acc:ZDB-GENE-071004-96]
81. cdx1b ENSDARG00000116139 113 1 - 1.000 - - - - - - - caudal type homeobox 1 b [Source:ZFIN;Acc:ZDB-GENE-070615-29]
82. BX511189.1 BX511189.1 34 1 - 1.000 - - - - - - -
83. si:dkey-57a22.13 ENSDARG00000092345, ENSDARG00000116169 2 1 - 1.000 - - - - - - - si:dkey-57a22.13 [Source:ZFIN;Acc:ZDB-GENE-081104-425]
84. si:ch211-255a21.4 si:ch211-255a21.4 26 1 - 1.000 - - - - - - -
85. LGALS8_1 LGALS8_1 29 1 - 1.000 - - - - - - -
86. dnah1 ENSDARG00000100115 17 1 - 1.000 - - - - - - - dynein, axonemal, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-081015-3]
87. si:dkey-218i12.3 si:dkey-218i12.3 4 1 - 1.000 - - - - - - -
88. mstnb ENSDARG00000069133 3 1 - 1.000 - - - - - - - myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
89. CABZ01089980.1 ENSDARG00000117446 16 1 - 1.000 - - - - - - -
90. atat1 ENSDARG00000004472 700 1 - 1.000 - - - - - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
91. sult3st1 ENSDARG00000009885 218 1 - 1.000 - - - - - - - sulfotransferase family 3, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-061207-52]
92. zgc:195633 19 1 - 1.000 - - - - - - - zgc:195633
93. PGBD4 ENSDARG00000079328 20 1 - 1.000 - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
94. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1 - 1.000 - - - - - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
95. si:ch211-113a14.26_3 6 1 - 1.000 - - - - - - - si:ch211-113a14.26
96. scin ENSDARG00000010728, ENSDARG00000111092 437 1 - 1.000 - - - - - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
97. BX321871.2 BX321871.2 1 1 - 1.000 - - - - - - -
98. atf1 ENSDARG00000044301, ENSDARG00000109865 2 1 - 1.000 - - - - - - - activating transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4334]
99. c3c c3c 174 1 - 1.000 - - - - - - -
100. si:ch211-220f16.1 ENSDARG00000093977 4 1 - - - 1.000 - - - - - si:ch211-220f16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-198]

There are 1564 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA