Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-232k18.2

Gene Name Gene ID Reads Annotation
si:ch211-232k18.2 si:ch211-232k18.2 2










Genes with expression patterns similar to si:ch211-232k18.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-232k18.2 si:ch211-232k18.2 2 4 - 1.000 - - - 1.000 - 1.000 1.000
2. akt3a_1 ENSDARG00000104810 12 2 - 1.000 - - - 1.000 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
3. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 2 - 1.000 - - - 1.000 - - -
4. tyro3 ENSDARG00000005356 4 2 - 1.000 - - - - - - 1.000 TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
5. FAM163A_1 ENSDARG00000093021 6 2 - - - - - 1.000 - - 1.000 family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
6. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 2 - 1.000 - - - - - - 1.000 purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
7. mstnb ENSDARG00000069133 3 2 - 1.000 - - - 1.000 - - - myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
8. TENM2 ENSDARG00000037122 48 2 - 1.000 - - - 1.000 - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
9. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.973 - 1.000 - - - 0.973 - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
10. chst1 ENSDARG00000088593, ENSDARG00000112011 102 1.956 - 1.000 - - - 0.956 - - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
11. rtn4rl2a ENSDARG00000052012 5 1.936 - 1.000 - - - - - - 0.936 reticulon 4 receptor-like 2 a [Source:ZFIN;Acc:ZDB-GENE-040310-4]
12. si:dkey-156m18.1 si:dkey-156m18.1 13 1.896 - 0.896 - - - 1.000 - - -
13. gphnb ENSDARG00000100851 118 1.868 - 1.000 - - - 0.868 - - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
14. gdf10a ENSDARG00000095378 12 1.866 - 1.000 - - - 0.866 - - - growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
15. nupl2 ENSDARG00000029043 105 1.861 - - - - - 1.000 - 0.861 - nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
16. si:dkey-222f2.3 si:dkey-222f2.3 8 1.822 - 1.000 - - - - - 0.822 -
17. SEMA6B SEMA6B 35 1.822 - 1.000 - - - - - 0.822 -
18. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 1.771 - 1.000 - - - - - - 0.771 R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
19. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 1.756 - 1.000 - - - 0.756 - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
20. PARP6 PARP6 119 1.753 - 1.000 - - - 0.753 - - -
21. necab1 ENSDARG00000056566, ENSDARG00000111028 26 1.744 - 1.000 - - - - - - 0.744 N-terminal EF-hand calcium binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-395]
22. si:rp71-1f1.4 ENSDARG00000092476 11 1.725 - 1.000 - - - 0.725 - - - si:rp71-1f1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-93]
23. tnr ENSDARG00000020771 20 1.702 - 0.731 - - - 0.971 - - - tenascin R (restrictin, janusin) [Source:ZFIN;Acc:ZDB-GENE-030804-1]
24. amigo3 ENSDARG00000074469 39 1.686 - 0.896 - - - 0.790 - - - adhesion molecule with Ig-like domain 3 [Source:ZFIN;Acc:ZDB-GENE-050208-449]
25. gabbr1b ENSDARG00000016667 14 1.68 - - - - - 0.866 - - 0.814 gamma-aminobutyric acid (GABA) B receptor, 1b [Source:ZFIN;Acc:ZDB-GENE-060503-5]
26. si:dkeyp-77h1.4 ENSDARG00000058248 54 1.66 - 0.704 - - - 0.956 - - - si:dkeyp-77h1.4 [Source:ZFIN;Acc:ZDB-GENE-050208-18]
27. si:ch211-149b19.4 ENSDARG00000095911 49 1.657 - 0.713 - - - 0.944 - - - si:ch211-149b19.4 [Source:ZFIN;Acc:ZDB-GENE-110411-90]
28. TOR4A_1 TOR4A_1 20 1.636 - - - - - 0.814 - 0.822 -
29. zgc:174224_2 ENSDARG00000093875 22 1.58 - 0.731 - - - 0.849 - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
30. cntnap5b ENSDARG00000075189 16 1.562 - 0.713 - - - 0.849 - - - contactin associated protein-like 5b [Source:ZFIN;Acc:ZDB-GENE-070705-209]
31. si:ch73-239k17.1 si:ch73-239k17.1 44 1.553 - 0.704 - - - 0.849 - - -
32. fem1a ENSDARG00000067966 11 1.526 - 0.704 - - - - - 0.822 - fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
33. CMA1_6 CMA1_6 2 1.525 - - - - - - - 0.822 0.703
34. BAI1_1 BAI1_1 57 1.466 - 0.704 - - - 0.762 - - -
35. hoxc9a ENSDARG00000092809 18 1 - - - - - 1.000 - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
36. yme1l1b ENSDARG00000104401 0 1 - - - - - - - - 1.000 YME1-like 1b [Source:ZFIN;Acc:ZDB-GENE-070410-25]
37. zgc:174697 zgc:174697 128 1 - 1.000 - - - - - - -
38. si:ch211-10j20.7 si:ch211-10j20.7 8 1 - 1.000 - - - - - - -
39. si:dkey-208k4.1 si:dkey-208k4.1 15 1 - - - - - 1.000 - - -
40. si:ch73-49p17.1 69 1 - 1.000 - - - - - - - si:ch73-49p17.1
41. mir301c 84 1 - 1.000 - - - - - - - microRNA 301c
42. dharma ENSDARG00000040955 0 1 - 1.000 - - - - - - - dharma [Source:ZFIN;Acc:ZDB-GENE-990415-22]
43. GADD45G GADD45G 382 1 - 1.000 - - - - - - -
44. cldnj ENSDARG00000058880 59 1 - 1.000 - - - - - - - claudin j [Source:ZFIN;Acc:ZDB-GENE-010328-10]
45. BX548021.2 BX548021.2 4 1 - 1.000 - - - - - - -
46. si:ch211-213i16.4 8 1 - 1.000 - - - - - - - si:ch211-213i16.4, transcript variant X1
47. prf1.7 1 1 - - - - - 1.000 - - - perforin 1.7
48. spo11 ENSDARG00000013837 7 1 - - - - - 1.000 - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
49. btbd3b ENSDARG00000087517 107 1 - 1.000 - - - - - - - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
50. SLC7A8 SLC7A8 25 1 - 1.000 - - - - - - -
51. slc2a15b ENSDARG00000053269 899 1 - 1.000 - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
52. rnf213b ENSDARG00000103551 63 1 - 1.000 - - - - - - - ring finger protein 213b [Source:ZFIN;Acc:ZDB-GENE-110822-1]
53. CABZ01087562.1 CABZ01087562.1 80 1 - 1.000 - - - - - - -
54. si:rp71-7l19.7 si:rp71-7l19.7 1 1 - - - - - 1.000 - - -
55. ela3l ENSDARG00000007276 11 1 - - - - - 1.000 - - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
56. si:ch211-173p18.3_1 ENSDARG00000035821 36 1 - 1.000 - - - - - - - si:ch211-173p18.3 [Source:ZFIN;Acc:ZDB-GENE-060503-672]
57. rgs9bp ENSDARG00000009466 41 1 - - - - - 1.000 - - - regulator of G protein signaling 9 binding protein [Source:ZFIN;Acc:ZDB-GENE-030728-1]
58. DKK3 DKK3 12 1 - - - - - 1.000 - - -
59. p4ha1a_1 ENSDARG00000033537, ENSDARG00000114754 36 1 - - - - - 1.000 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
60. ZNF648 ENSDARG00000104823 194 1 - 1.000 - - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
61. MFAP4_4 MFAP4_4 9 1 - - - - - 1.000 - - -
62. aldh1a3 ENSDARG00000076933 95 1 - 1.000 - - - - - - - aldehyde dehydrogenase 1 family, member A3 [Source:ZFIN;Acc:ZDB-GENE-061128-2]
63. ciz1a ENSDARG00000089781 20 1 - 1.000 - - - - - - - cdkn1a interacting zinc finger protein 1a [Source:ZFIN;Acc:ZDB-GENE-100922-222]
64. si:dkey-199m13.3 si:dkey-199m13.3 2 1 - - - - - - - - 1.000
65. CMA1_11 CMA1_11 0 1 - 1.000 - - - - - - -
66. si:dkey-266f7.10 ENSDARG00000086613 7 1 - - - - - 1.000 - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
67. lppr5b lppr5b 23 1 - 1.000 - - - - - - -
68. efemp2b_1 ENSDARG00000020811 77 1 - - - - - 1.000 - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
69. BX511006.2 BX511006.2 29 1 - 1.000 - - - - - - -
70. fstl5 ENSDARG00000040198 213 1 - 1.000 - - - - - - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
71. pag1 ENSDARG00000055875 21 1 - 1.000 - - - - - - - phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:ZFIN;Acc:ZDB-GENE-060503-586]
72. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1 - - - - - 1.000 - - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
73. hip1r hip1r 10 1 - - - - - 1.000 - - -
74. ZP2_3 ZP2_3 2 1 - 1.000 - - - - - - -
75. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 - - - - - 1.000 - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
76. nr5a1b ENSDARG00000023362 54 1 - - - - - 1.000 - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
77. zgc:171445 ENSDARG00000115205 3 1 - 1.000 - - - - - - - zgc:171445 [Source:ZFIN;Acc:ZDB-GENE-080205-2]
78. WNK3 WNK3 36 1 - 1.000 - - - - - - -
79. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - - 1.000 - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
80. star ENSDARG00000006137 149 1 - 1.000 - - - - - - - steroidogenic acute regulatory protein [Source:ZFIN;Acc:ZDB-GENE-001120-3]
81. wu:fe11b02_1 wu:fe11b02_1 7 1 - - - - - - - - 1.000
82. si:dkey-56m15.4 si:dkey-56m15.4 39 1 - 1.000 - - - - - - -
83. cthrc1b ENSDARG00000001971 44 1 - 1.000 - - - - - - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
84. MOV10L1 MOV10L1 21 1 - 1.000 - - - - - - -
85. si:dkey-149m13.3 si:dkey-149m13.3 0 1 - 1.000 - - - - - - -
86. si:ch211-285c6.2 ENSDARG00000079234 1 1 - - - - - 1.000 - - - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
87. si:dkey-191j3.2 ENSDARG00000101997 1 1 - 1.000 - - - - - - - si:dkey-191j3.2 [Source:ZFIN;Acc:ZDB-GENE-081103-55]
88. EPM2AIP1 EPM2AIP1 4 1 - 1.000 - - - - - - -
89. SNORA35 SNORA35 0 1 - - - - - - - - 1.000
90. AC024175.21 AC024175.21 10 1 - 1.000 - - - - - - -
91. si:ch211-121j5.2 si:ch211-121j5.2 86 1 - - - - - 1.000 - - -
92. si:dkey-47k20.3 ENSDARG00000029635 0 1 - - - - - 1.000 - - - si:dkey-47k20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-830]
93. OGFR ENSDARG00000037837 4 1 - - - - - - - - 1.000 opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
94. RECK ENSDARG00000090039 15 1 - 1.000 - - - - - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
95. arhgef3 ENSDARG00000013834 3 1 - 1.000 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-050208-773]
96. map3k9 ENSDARG00000013491 1 1 - - - - - - - - 1.000 mitogen-activated protein kinase kinase kinase 9 [Source:ZFIN;Acc:ZDB-GENE-081113-5]
97. grid2 ENSDARG00000055302, ENSDARG00000110593 1 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, delta 2 [Source:ZFIN;Acc:ZDB-GENE-040913-1]
98. sobpb ENSDARG00000017386 0 1 - - - - - - - - 1.000 sine oculis binding protein homolog (Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-041210-8]
99. fam175b fam175b 37 1 - 1.000 - - - - - - -
100. CR847504.1 ENSDARG00000102515 29 1 - 1.000 - - - - - - -

There are 846 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA