Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-225b11.4

Gene Name Gene ID Reads Annotation
si:ch211-225b11.4 ENSDARG00000093563 42 si:ch211-225b11.4 [Source:ZFIN;Acc:ZDB-GENE-060526-114]










Genes with expression patterns similar to si:ch211-225b11.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-225b11.4 ENSDARG00000093563 42 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-225b11.4 [Source:ZFIN;Acc:ZDB-GENE-060526-114]
2. ddr2b ENSDARG00000058695 7 2 1.000 - - - - 1.000 - - - discoidin domain receptor tyrosine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060503-361]
3. si:dkey-282h22.5 ENSDARG00000092458 7 1.996 1.000 - 0.996 - - - - - - si:dkey-282h22.5 [Source:ZFIN;Acc:ZDB-GENE-091204-220]
4. megf11 ENSDARG00000062686 230 1.902 1.000 - - 0.902 - - - - - multiple EGF-like-domains 11 [Source:ZFIN;Acc:ZDB-GENE-060503-252]
5. CCDC74B CCDC74B 8 1.868 1.000 - - - - 0.868 - - -
6. pax7b ENSDARG00000070818 282 1.832 - - - - - 0.942 0.890 - - paired box 7b [Source:ZFIN;Acc:ZDB-GENE-080917-54]
7. zfpm2a ENSDARG00000040123 46 1.822 1.000 - - - - - 0.822 - - zinc finger protein, FOG family member 2a [Source:ZFIN;Acc:ZDB-GENE-060130-4]
8. WSCD1 ENSDARG00000098113 35 1.822 0.864 - 0.958 - - - - - - WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
9. wu:fe38f03 wu:fe38f03 22 1.797 - - 0.929 - - 0.868 - - -
10. map3k7cl ENSDARG00000069143 130 1.749 - - 0.875 - - - 0.874 - - map3k7 C-terminal like [Source:ZFIN;Acc:ZDB-GENE-091204-239]
11. zgc:171626 zgc:171626 42 1.745 1.000 - - - - - 0.745 - -
12. camk1db ENSDARG00000017446 47 1.737 - - - 0.915 - - 0.822 - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
13. zgc:113294 ENSDARG00000032285 132 1.698 - - - 0.749 - - 0.949 - - zgc:113294 [Source:ZFIN;Acc:ZDB-GENE-050320-124]
14. grxcr1 ENSDARG00000069865 22 1.635 - - - 0.917 - 0.718 - - - glutaredoxin, cysteine rich 1 [Source:ZFIN;Acc:ZDB-GENE-070424-166]
15. shank3b ENSDARG00000063054 148 1.628 - - - 0.725 - 0.903 - - - SH3 and multiple ankyrin repeat domains 3b [Source:ZFIN;Acc:ZDB-GENE-041210-74]
16. CR788231.1 CR788231.1 61 1.601 - - - 0.874 0.727 - - - -
17. si:dkey-238o14.8 si:dkey-238o14.8 32 1.601 - - - - - 0.868 - - 0.733
18. LARS2 ENSDARG00000075337 181 1.574 - - - 0.706 - 0.868 - - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
19. si:ch211-196f5.9 ENSDARG00000096451 70 1.549 - - - 0.807 - - 0.742 - - si:ch211-196f5.9 [Source:ZFIN;Acc:ZDB-GENE-120709-32]
20. Mar-04 Mar-04 21 1.525 0.758 - - - - 0.767 - - -
21. nphp1 ENSDARG00000009046, ENSDARG00000113790 104 1.472 - - - 0.764 - - 0.708 - - nephronophthisis 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1234]
22. ephx2 ENSDARG00000040255 105 1.456 - - 0.739 - - 0.717 - - - epoxide hydrolase 2, cytoplasmic [Source:ZFIN;Acc:ZDB-GENE-041212-70]
23. foxl2 61 1 1.000 - - - - - - - - forkhead box L2, transcript variant X1
24. si:dkey-72l14.7 si:dkey-72l14.7 3 1 - - - - - 1.000 - - -
25. vwc2 ENSDARG00000076495 22 1 1.000 - - - - - - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
26. otx5 ENSDARG00000043483 282 1 1.000 - - - - - - - - orthodenticle homolog 5 [Source:ZFIN;Acc:ZDB-GENE-030508-1]
27. scospondin ENSDARG00000067859 4 1 1.000 - - - - - - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
28. C25HXorf38_1 C25HXorf38_1 35 1 1.000 - - - - - - - -
29. zgc:153151 ENSDARG00000069563 126 1 1.000 - - - - - - - - zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
30. TMEM245 ENSDARG00000070455 85 1 1.000 - - - - - - - - transmembrane protein 245 [Source:ZFIN;Acc:ZDB-GENE-100922-188]
31. lonrf1 ENSDARG00000075048 13 1 1.000 - - - - - - - - LON peptidase N-terminal domain and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-101021-4]
32. TRIM14_10 TRIM14_10 9 1 1.000 - - - - - - - -
33. CR936465.1 CR936465.1 7 1 1.000 - - - - - - - -
34. CABZ01086354.1_1 CABZ01086354.1_1 89 1 1.000 - - - - - - - -
35. rgs7bpb ENSDARG00000016742, ENSDARG00000117059 87 1 1.000 - - - - - - - - regulator of G protein signaling 7 binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-9502]
36. ptx3a ENSDARG00000068275 589 1 1.000 - - - - - - - - pentraxin 3, long a [Source:ZFIN;Acc:ZDB-GENE-030131-8720]
37. opcml ENSDARG00000013005 18 1 1.000 - - - - - - - - opioid binding protein/cell adhesion molecule-like [Source:ZFIN;Acc:ZDB-GENE-040927-3]
38. wbscr27 wbscr27 70 1 1.000 - - - - - - - -
39. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 1.000 - - - - - - - -
40. trpc2 trpc2 10 1 1.000 - - - - - - - -
41. cpa6 ENSDARG00000012013 73 1 1.000 - - - - - - - - carboxypeptidase A6 [Source:ZFIN;Acc:ZDB-GENE-091204-331]
42. lifra ENSDARG00000098857 11 1 1.000 - - - - - - - - leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
43. ggcta ENSDARG00000076406 33 1 1.000 - - - - - - - - gamma-glutamylcyclotransferase a [Source:ZFIN;Acc:ZDB-GENE-081104-129]
44. tmem199 ENSDARG00000069314, ENSDARG00000112510 36 1 1.000 - - - - - - - - transmembrane protein 199 [Source:ZFIN;Acc:ZDB-GENE-050522-150]
45. si:dkeyp-69e1.8 ENSDARG00000055731 35 1 1.000 - - - - - - - - si:dkeyp-69e1.8 [Source:ZFIN;Acc:ZDB-GENE-070912-676]
46. pnp4b ENSDARG00000029230 6 1 1.000 - - - - - - - - purine nucleoside phosphorylase 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1887]
47. Mar-01 Mar-01 176 1 1.000 - - - - - - - -
48. tdrd1 ENSDARG00000007465, ENSDARG00000109298 17 1 1.000 - - - - - - - - tudor domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070803-1]
49. zgc:92275 ENSDARG00000034048 9 1 1.000 - - - - - - - - zgc:92275 [Source:ZFIN;Acc:ZDB-GENE-040718-356]
50. mir138 19 1 1.000 - - - - - - - - microRNA 138
51. MPP4 MPP4 1 1 1.000 - - - - - - - -
52. SCARB2 SCARB2 24 1 1.000 - - - - - - - -
53. tekt1 ENSDARG00000101331 27 1 1.000 - - - - - - - - tektin 1 [Source:ZFIN;Acc:ZDB-GENE-041114-99]
54. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1 1.000 - - - - - - - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
55. si:dkeyp-46h3.3 ENSDARG00000092887 11 1 1.000 - - - - - - - - si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
56. CABZ01070631.1 ENSDARG00000110183 6 1 1.000 - - - - - - - - F-BAR and double SH3 domains protein 2-like [Source:NCBI gene;Acc:100537850]
57. CU929145.3 ENSDARG00000097274 3 1 1.000 - - - - - - - -
58. wisp1b ENSDARG00000076685 38 1 1.000 - - - - - - - - WNT1 inducible signaling pathway protein 1b [Source:ZFIN;Acc:ZDB-GENE-080220-16]
59. kcnk10b ENSDARG00000045956 43 1 1.000 - - - - - - - - potassium channel, subfamily K, member 10b [Source:ZFIN;Acc:ZDB-GENE-050420-31]
60. sdr42e1 ENSDARG00000098838 25 1 1.000 - - - - - - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]
61. gpr88 24 1 1.000 - - - - - - - - G protein-coupled receptor 88
62. mir124-1 10 1 1.000 - - - - - - - - microRNA 124-1
63. ZNF337_10 ZNF337_10 183 1 1.000 - - - - - - - -
64. EVI5L ENSDARG00000052766 8 1 1.000 - - - - - - - - ecotropic viral integration site 5 like [Source:HGNC Symbol;Acc:HGNC:30464]
65. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 1 1.000 - - - - - - - - popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
66. zgc:113397 zgc:113397 60 1 1.000 - - - - - - - -
67. syce2 ENSDARG00000103187 12 1 1.000 - - - - - - - - synaptonemal complex central element protein 2 [Source:ZFIN;Acc:ZDB-GENE-050512-1]
68. htr1b ENSDARG00000053987 11 1 1.000 - - - - - - - - 5-hydroxytryptamine (serotonin) receptor 1B [Source:ZFIN;Acc:ZDB-GENE-081022-141]
69. zgc:158846 ENSDARG00000058462, ENSDARG00000113282 161 1 1.000 - - - - - - - - zgc:158846 [Source:ZFIN;Acc:ZDB-GENE-070209-50]
70. gcshb ENSDARG00000105187 182 1 1.000 - - - - - - - - glycine cleavage system protein H (aminomethyl carrier), b [Source:ZFIN;Acc:ZDB-GENE-040718-319]
71. si:ch211-208f21.2 ENSDARG00000094177 61 1 1.000 - - - - - - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
72. stpg1 ENSDARG00000103765 19 1 1.000 - - - - - - - - sperm-tail PG-rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-373]
73. fam160b1 ENSDARG00000060168 22 1 1.000 - - - - - - - - family with sequence similarity 160, member B1 [Source:ZFIN;Acc:ZDB-GENE-070424-63]
74. si:ch211-219a15.3 ENSDARG00000087659 12 1 1.000 - - - - - - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
75. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1 1.000 - - - - - - - -
76. SNORA63_2 SNORA63_2 6 1 1.000 - - - - - - - -
77. DUSP23 DUSP23 121 1 1.000 - - - - - - - -
78. unc5da ENSDARG00000092722 8 1 - - - - - 1.000 - - - unc-5 netrin receptor Da [Source:ZFIN;Acc:ZDB-GENE-080908-2]
79. si:dkey-89j23.3 si:dkey-89j23.3 9 1 1.000 - - - - - - - -
80. rag2 ENSDARG00000052121 15 1 1.000 - - - - - - - - recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
81. U3_10 U3_10 1 1 1.000 - - - - - - - -
82. TDRD15 TDRD15 46 1 1.000 - - - - - - - -
83. nr5a1a ENSDARG00000103176 12 1 1.000 - - - - - - - - nuclear receptor subfamily 5, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-010504-1]
84. lrp1ba ENSDARG00000004789, ENSDARG00000094171 3 1 1.000 - - - - - - - - low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]
85. zgc:110434 21 1 1.000 - - - - - - - - zgc:110434
86. si:ch211-202m22.1 ENSDARG00000094491 24 1 1.000 - - - - - - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
87. lenep ENSDARG00000095553 11 1 1.000 - - - - - - - - lens epithelial protein [Source:ZFIN;Acc:ZDB-GENE-060130-3]
88. elovl4b ENSDARG00000027495 107 1 1.000 - - - - - - - - ELOVL fatty acid elongase 4b [Source:ZFIN;Acc:ZDB-GENE-030131-7672]
89. pdia2 ENSDARG00000018263 74 1 1.000 - - - - - - - - protein disulfide isomerase family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-705]
90. zgc:113209 ENSDARG00000100294 176 1 1.000 - - - - - - - - zgc:113209 [Source:ZFIN;Acc:ZDB-GENE-050410-8]
91. si:ch211-245j22.3 ENSDARG00000041379, ENSDARG00000110219, ENSDARG00000110924 3 1 1.000 - - - - - - - - si:ch211-245j22.3 [Source:ZFIN;Acc:ZDB-GENE-050419-38]
92. zgc:172053 ENSDARG00000038321 9 1 1.000 - - - - - - - - zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25]
93. si:ch211-190k17.19 ENSDARG00000095756 19 1 1.000 - - - - - - - - si:ch211-190k17.19 [Source:ZFIN;Acc:ZDB-GENE-070912-167]
94. Metazoa_SRP_27 Metazoa_SRP_27 2 1 1.000 - - - - - - - -
95. arl16 ENSDARG00000059498, ENSDARG00000110386 229 1 1.000 - - - - - - - - ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]
96. cldnd ENSDARG00000006580 17 1 1.000 - - - - - - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
97. grm1a ENSDARG00000026796 9 1 1.000 - - - - - - - - glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893]
98. si:ch211-277p15.1 2 1 - - - - - 1.000 - - - si:ch211-277p15.1, transcript variant X5
99. ddrgk1 ENSDARG00000037172 14 1 1.000 - - - - - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
100. CU984580.1 CU984580.1 141 1 1.000 - - - - - - - -

There are 834 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA